Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Eleusine_20coracana_20subsp._20coracana_20[genbank_20GCA_5F002180455
.1_202017-06-08] 525,627 sequences; 1,195,986,209 total letters
Query= AAMG01001671.1
Length=306
Score E
Sequences producing significant alignments: (Bits) Value
seq377977 87.8 3e-15
seq393481 75.2 2e-11
>seq377977
Length=283
Score = 87.8 bits (96), Expect = 3e-15
Identities = 60/68 (88%), Gaps = 0/68 (0%)
Strand=Plus/Minus
Query 53 GAGCTCTATGGCTCGTTGGGCGCCACTGGCAAAGGCCACGGCAGCGACAAGGCCATGTTG 112
||||| || ||||| ||||||||||| ||||| |||||||||||||||||||| || ||
Sbjct 201 GAGCTGTACGGCTCCTTGGGCGCCACCGGCAAGGGCCACGGCAGCGACAAGGCGGTGCTG 142
Query 113 CTGGGCCT 120
||||||||
Sbjct 141 CTGGGCCT 134
>seq393481
Length=1909
Score = 75.2 bits (82), Expect = 2e-11
Identities = 74/96 (77%), Gaps = 0/96 (0%)
Strand=Plus/Plus
Query 53 GAGCTCTATGGCTCGTTGGGCGCCACTGGCAAAGGCCACGGCAGCGACAAGGCCATGTTG 112
||||| || ||||| |||||||||| ||||| ||||| |||||||||||||| || ||
Sbjct 236 GAGCTGTACGGCTCCCTGGGCGCCACCGGCAAGGGCCATGGCAGCGACAAGGCGGTGCTG 295
Query 113 CTGGGCCTGGAAGGCGAACACCCCGACACCGTGAAT 148
||||| || ||| | | || || |||||| ||
Sbjct 296 CTGGGGCTCAGCGGCCATGAACCGGATACCGTGGAT 331
Score = 73.4 bits (80), Expect = 7e-11
Identities = 55/65 (85%), Gaps = 0/65 (0%)
Strand=Plus/Plus
Query 53 GAGCTCTATGGCTCGTTGGGCGCCACTGGCAAAGGCCACGGCAGCGACAAGGCCATGTTG 112
||||| || ||||| |||||||||| ||||| ||||| |||||||||||||| || ||
Sbjct 104 GAGCTGTACGGCTCCCTGGGCGCCACCGGCAAGGGCCATGGCAGCGACAAGGCGGTGCTG 163
Query 113 CTGGG 117
|||||
Sbjct 164 CTGGG 168
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 872191302464
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |