Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Eleusine_20coracana_20subsp._20coracana_20[genbank_20GCA_5F002180455
.1_202017-06-08] 525,627 sequences; 1,195,986,209 total letters
Query= AAMG01001693.1
Length=610
Score E
Sequences producing significant alignments: (Bits) Value
seq446386 232 2e-58
>seq446386
Length=1427
Score = 232 bits (256), Expect = 2e-58
Identities = 364/515 (71%), Gaps = 7/515 (1%)
Strand=Plus/Minus
Query 12 CACCCACCCCGGTGTGGTGCGGCGACCTCCCCTACATCTGGGCCCATGGGAAATGGCATT 71
|||| | || ||||||||| ||||| || |||| ||||||| || || |||||||
Sbjct 512 CACCGAACCAGGTGTGGTGTGGCGATATCACCTATGTCTGGGCGCAGGGTCGCTGGCATT 453
Query 72 ACCTGGCTGTCGCGCTGGA--TCTTTGCTCGCGCCGGGTGGTGGCTTGGGCGTTGACCAG 129
|| | || || | |||| | ||||| || || || |||| |||||||| || |
Sbjct 452 ACGTCGCGGTAGTCATGGACTTGTTTGCCCGT--CGCGTCGTGGGCTGGGCGTTTTCC-G 396
Query 130 ACACCCCGGACGCCGATCTGGCTATGCGGGCGCTGGATATGGCTTACCAGCCTGCACGA- 188
||| || || || ||| ||| || | ||| |||| | ||||||| ||| || ||
Sbjct 395 CCACGCCTGATGCTGATTTGGTCATCCAGGCCTTGGACAGGGCTTACGAGCA-GCGCGGT 337
Query 189 CGACCTCATGGTCTGCTGGTTCACTCGGATCAAGGGTCGCAGTATGCGAGTCGTTTATTT 248
|| |||| | |||| ||||| || || ||| || |||| ||||| |||
Sbjct 336 CGGCCTCGAGAGGTGCTCTTTCACAGCGACCAGGGGAGCCAATATGGCAGTCGACGCTTT 277
Query 249 CGCCAGCGGCTGTGGCGTTATCGCATGCGCCAGAGCATGAGTCGCCGGGGAAATTGCTGG 308
||||||||||| ||||| || ||| | ||||||||||||| | || || || ||| |
Sbjct 276 CGCCAGCGGCTTTGGCGCTACCGCTTCAACCAGAGCATGAGTAGACGAGGTAACTGCCTG 217
Query 309 GACAATGCGCCAATGGAGCGCGTGTTCCGCAGCTTGAAAACGGAGTGGATACCGACCACG 368
||||| | || |||||||| ||||||||||| | || ||||| |||||||| ||| |
Sbjct 216 GACAACTCACCCATGGAGCGGTTGTTCCGCAGCCTCAAGACGGAATGGATACCAACCCAG 157
Query 369 GGTTACCGAACGGCTCAAGAAGCCCAGCGCGATATCAGCCAATTCTTAATGCATCGGTAC 428
||||||| | ||| | || || | || ||| | | ||| | ||||| || |||
Sbjct 156 GGTTACCTGAGTGCTACGCAGGCACAACAGGACATCGGTCGGTTCCTGATGCAACGCTAC 97
Query 429 AACTGGATTCGCCCCCATCGATTCAACGGTGGGCTGGCGCCAGCTCGGGCCGAAGAAAAA 488
|||||| || || |||| ||||| || ||||| |||| || ||||| ||| |
Sbjct 96 AACTGGCAACGGCCGCATCAGTTCAATGGCGGGCTACCGCCCGCCATTGCCGAGGAACGA 37
Query 489 CTTAACGTCGTGTCCGGGATTAGTTGACCACTACA 523
||||| ||||||||||||||||||||||||||
Sbjct 36 CTTAAACCAGTGTCCGGGATTAGTTGACCACTACA 2
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1836391536293
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |