Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eleusine_20coracana_20subsp._20coracana_20[genbank_20GCA_5F002180455 .1_202017-06-08] 525,627 sequences; 1,195,986,209 total letters Query= AAMG01001787.1 Length=163 Score E Sequences producing significant alignments: (Bits) Value seq157717 95.1 1e-17 seq26660 89.7 4e-16 >seq157717 Length=283 Score = 95.1 bits (104), Expect = 1e-17 Identities = 100/132 (76%), Gaps = 0/132 (0%) Strand=Plus/Plus Query 30 GACGCCGTTGTTTGGCCAGCCGGAATGGTTCCTCGGGATCCTGCCGAGCCAGCAGGGCAA 89 ||| || ||||||||||| || || ||||| | || || ||||| ||| ||||| Sbjct 1 GACACCTTTGTTTGGCCAACCCGACTGGTTTTTGGGCATACTGCCATCACAGTCCGGCAA 60 Query 90 CTTGAAGGTATTGGACACCGCGCGTTGGGTCATGCCCGACCGCTATCGGGATGATTTCCG 149 | | ||||| | || ||||| || ||||| |||||||| || || |||||||||||| Sbjct 61 CCTTAAGGTGCTCGATACCGCCCGCTGGGTGATGCCCGATCGTTACCGGGATGATTTCAA 120 Query 150 CCAGGGCTTGCA 161 ||||||||||| Sbjct 121 GCAGGGCTTGCA 132 >seq26660 Length=1216 Score = 89.7 bits (98), Expect = 4e-16 Identities = 99/132 (75%), Gaps = 0/132 (0%) Strand=Plus/Plus Query 30 GACGCCGTTGTTTGGCCAGCCGGAATGGTTCCTCGGGATCCTGCCGAGCCAGCAGGGCAA 89 ||| || ||||||||||| || || ||||| | || || ||||| ||| ||||| Sbjct 1 GACACCTTTGTTTGGCCAACCCGACTGGTTTTTGGGCATACTGCCATCACAGTCCGGCAA 60 Query 90 CTTGAAGGTATTGGACACCGCGCGTTGGGTCATGCCCGACCGCTATCGGGATGATTTCCG 149 | ||||||| | || |||||||| ||||| ||||| || || || ||||| |||||| Sbjct 61 CCTGAAGGTGCTCGATACCGCGCGCTGGGTGATGCCGGATCGTTACCGGGACGATTTCAA 120 Query 150 CCAGGGCTTGCA 161 |||||| |||| Sbjct 121 GCAGGGCCTGCA 132 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 420249134316