Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Eleusine_20coracana_20subsp._20coracana_20[genbank_20GCA_5F002180455
.1_202017-06-08] 525,627 sequences; 1,195,986,209 total letters
Query= AAMG01001787.1
Length=163
Score E
Sequences producing significant alignments: (Bits) Value
seq157717 95.1 1e-17
seq26660 89.7 4e-16
>seq157717
Length=283
Score = 95.1 bits (104), Expect = 1e-17
Identities = 100/132 (76%), Gaps = 0/132 (0%)
Strand=Plus/Plus
Query 30 GACGCCGTTGTTTGGCCAGCCGGAATGGTTCCTCGGGATCCTGCCGAGCCAGCAGGGCAA 89
||| || ||||||||||| || || ||||| | || || ||||| ||| |||||
Sbjct 1 GACACCTTTGTTTGGCCAACCCGACTGGTTTTTGGGCATACTGCCATCACAGTCCGGCAA 60
Query 90 CTTGAAGGTATTGGACACCGCGCGTTGGGTCATGCCCGACCGCTATCGGGATGATTTCCG 149
| | ||||| | || ||||| || ||||| |||||||| || || ||||||||||||
Sbjct 61 CCTTAAGGTGCTCGATACCGCCCGCTGGGTGATGCCCGATCGTTACCGGGATGATTTCAA 120
Query 150 CCAGGGCTTGCA 161
|||||||||||
Sbjct 121 GCAGGGCTTGCA 132
>seq26660
Length=1216
Score = 89.7 bits (98), Expect = 4e-16
Identities = 99/132 (75%), Gaps = 0/132 (0%)
Strand=Plus/Plus
Query 30 GACGCCGTTGTTTGGCCAGCCGGAATGGTTCCTCGGGATCCTGCCGAGCCAGCAGGGCAA 89
||| || ||||||||||| || || ||||| | || || ||||| ||| |||||
Sbjct 1 GACACCTTTGTTTGGCCAACCCGACTGGTTTTTGGGCATACTGCCATCACAGTCCGGCAA 60
Query 90 CTTGAAGGTATTGGACACCGCGCGTTGGGTCATGCCCGACCGCTATCGGGATGATTTCCG 149
| ||||||| | || |||||||| ||||| ||||| || || || ||||| ||||||
Sbjct 61 CCTGAAGGTGCTCGATACCGCGCGCTGGGTGATGCCGGATCGTTACCGGGACGATTTCAA 120
Query 150 CCAGGGCTTGCA 161
|||||| ||||
Sbjct 121 GCAGGGCCTGCA 132
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 420249134316
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |