Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Eleusine_20coracana_20subsp._20coracana_20[genbank_20GCA_5F002180455
.1_202017-06-08] 525,627 sequences; 1,195,986,209 total letters
Query= AAMG01001844.1
Length=290
Score E
Sequences producing significant alignments: (Bits) Value
seq191600 242 6e-62
seq487777 228 1e-57
seq78141 226 5e-57
seq266671 197 2e-48
seq265621 185 1e-44
seq70311 181 2e-43
seq45962 178 2e-42
seq35649 167 4e-39
seq125478 163 5e-38
seq361842 156 7e-36
seq102997 152 8e-35
seq40001 141 2e-31
seq518492 131 3e-28
seq343732 113 7e-23
seq180841 109 9e-22
seq171352 100 5e-19
seq142100 100 5e-19
seq86598 95.1 2e-17
seq323032 91.5 2e-16
seq353491 87.8 3e-15
seq514564 86.0 1e-14
seq301880 80.6 4e-13
seq510453 75.2 2e-11
seq243559 75.2 2e-11
seq296954 73.4 7e-11
>seq191600
Length=457
Score = 242 bits (268), Expect = 6e-62
Identities = 223/282 (79%), Gaps = 0/282 (0%)
Strand=Plus/Plus
Query 1 CCCACGCTTTCGCGCCTCAGCGTCAGTTACTGTCCAGCAATCCGCCTTCGCCACTGGTGT 60
||||||||||||| |||||| |||||| | |||||| | ||||||||||||||||||
Sbjct 37 CCCACGCTTTCGCACCTCAGTGTCAGTGTCAGTCCAGGTAGTCGCCTTCGCCACTGGTGT 96
Query 61 TCCTCCGTATATCTACGCATTTCACCGCTACACACGGAATTCCGATTGCCTCTCCAGCAC 120
|||| | ||||||||||||||||||||||||| | |||||| | ||||| | ||||
Sbjct 97 TCCTTCCAATATCTACGCATTTCACCGCTACACTGGAAATTCCACTACCCTCTACCGCAC 156
Query 121 TCAAGAAAAACAGTTTCAAATGCAGGCTATGGGTTGAGCCCATAGTTTTCACATCTGACT 180
|| || | ||||||| |||||| |||||||||| | ||||||||| |||
Sbjct 157 TCTAGCCAGACAGTTTTGGATGCAGTTCCCAGGTTGAGCCCGGGGATTTCACATCCAACT 216
Query 181 TGCCTTCCCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACG 240
| | || ||||| ||| |||||| |||| ||| |||| |||||||||| ||| ||
Sbjct 217 TATCAAGCCACCTACGCGCGCTTTACGCCCAGTAATTCCGATTAACGCTTGCACCCTTCG 276
Query 241 TATTACCGCGGCTGCTGGCACGTAGTTAGCCGTGGCTTATTC 282
|||||||||||||||||||||| ||||||||| ||||||||
Sbjct 277 TATTACCGCGGCTGCTGGCACGAAGTTAGCCGGTGCTTATTC 318
>seq487777
Length=408
Score = 228 bits (252), Expect = 1e-57
Identities = 213/271 (79%), Gaps = 0/271 (0%)
Strand=Plus/Minus
Query 1 CCCACGCTTTCGCGCCTCAGCGTCAGTTACTGTCCAGCAATCCGCCTTCGCCACTGGTGT 60
||||||||||||| |||||||||||||| | | |||| || |||||||||||||||||||
Sbjct 271 CCCACGCTTTCGCACCTCAGCGTCAGTTCCGGACCAGTAAGCCGCCTTCGCCACTGGTGT 212
Query 61 TCCTCCGTATATCTACGCATTTCACCGCTACACACGGAATTCCGATTGCCTCTCCAGCAC 120
|| ||| ||||||||| ||| |||| |||||| ||| |||| || ||||| | | ||
Sbjct 211 TCTTCCTAATATCTACGAATTCCACCTCTACACTAGGAGTTCCACTTACCTCTTCCGGAC 152
Query 121 TCAAGAAAAACAGTTTCAAATGCAGGCTATGGGTTGAGCCCATAGTTTTCACATCTGACT 180
|| || |||| ||||| |||| | ||||||| | | |||||| ||||||
Sbjct 151 TCTAGCTTGCCAGTATCAAAGGCAGTTCCAGAGTTGAGCTCTGGGATTTCACCCCTGACT 92
Query 181 TGCCTTCCCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACG 240
| | |||||||| || |||||| |||| |||||||| | |||||| ||| ||| ||
Sbjct 91 TAACAAACCGCCTACGTGCGCTTTACGCCCAGTAAATCCGAACAACGCTAGCCCCCTTCG 32
Query 241 TATTACCGCGGCTGCTGGCACGTAGTTAGCC 271
|||||||||||||||||||||| ||||||||
Sbjct 31 TATTACCGCGGCTGCTGGCACGAAGTTAGCC 1
>seq78141
Length=429
Score = 226 bits (250), Expect = 5e-57
Identities = 224/290 (77%), Gaps = 0/290 (0%)
Strand=Plus/Minus
Query 1 CCCACGCTTTCGCGCCTCAGCGTCAGTTACTGTCCAGCAATCCGCCTTCGCCACTGGTGT 60
|||||||||||| ||||||| |||||| |||||| | |||||||||||| | |||
Sbjct 385 CCCACGCTTTCGTGCCTCAGTGTCAGTGCTGGTCCAGGTAGTCGCCTTCGCCACGGATGT 326
Query 61 TCCTCCGTATATCTACGCATTTCACCGCTACACACGGAATTCCGATTGCCTCTCCAGCAC 120
|||||| || |||||||||||||| ||||||| |||||||| | ||||| | ||||
Sbjct 325 TCCTCCCGATCTCTACGCATTTCACTGCTACACCGGGAATTCCACTACCCTCTACCGCAC 266
Query 121 TCAAGAAAAACAGTTTCAAATGCAGGCTATGGGTTGAGCCCATAGTTTTCACATCTGACT 180
|| || |||| || |||||| ||||||||||| | ||||||||| ||||
Sbjct 265 TCTAGCCTGCCAGTATCCAATGCAATTCCCAGGTTGAGCCCAGGGCTTTCACATCAGACT 206
Query 181 TGCCTTCCCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACG 240
| | || ||||| | | |||||| |||| ||| |||| |||||||||| ||| ||
Sbjct 205 TAACAAACCACCTACGCACGCTTTACGCCCAGTAATTCCGAGTAACGCTTGCACCCTTCG 146
Query 241 TATTACCGCGGCTGCTGGCACGTAGTTAGCCGTGGCTTATTCCTCAGGTA 290
|||||||||||||||||||||| ||||||||| |||||||| | ||||
Sbjct 145 TATTACCGCGGCTGCTGGCACGAAGTTAGCCGGTGCTTATTCTTTGGGTA 96
>seq266671
Length=1116
Score = 197 bits (218), Expect = 2e-48
Identities = 215/283 (76%), Gaps = 2/283 (1%)
Strand=Plus/Plus
Query 1 CCCACGCTTTCGCGCCTCAGCGTCAGTTACTGTCCAGCAATCCGCCTTCGCCACTGGTGT 60
|||||||||||| | ||||||||||||| || | | |||||||| | ||||||
Sbjct 82 CCCACGCTTTCGTCCATCAGCGTCAGTTAAGACATAGTGACCTGCCTTCGCAATTGGTGT 141
Query 61 TCCTCCGTA-TATCTACGCATTTCACCGCTACACACGGAATTCCGATTGCCTCTCCAGCA 119
|| | ||| |||||| ||||||||||||||||| ||||| | ||| | |
Sbjct 142 TC-TAAGTAATATCTATGCATTTCACCGCTACACTACTTATTCCAGCCACTTCTACCTTA 200
Query 120 CTCAAGAAAAACAGTTTCAAATGCAGGCTATGGGTTGAGCCCATAGTTTTCACATCTGAC 179
||||||| |||| |||| |||| | |||| |||| | || |||||| |||||
Sbjct 201 CTCAAGACCTGCAGTATCAATGGCAGTTTTCCGGTTAAGCCGAAAGATTTCACCACTGAC 260
Query 180 TTGCCTTCCCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTAC 239
|| | |||||||| ||||||| |||||||||||||||||||||||||| ||| |
Sbjct 261 TTACAGATCCGCCTACGGACCCTTTAAACCCAATAAATCCGGATAACGCTTGCACCCTCC 320
Query 240 GTATTACCGCGGCTGCTGGCACGTAGTTAGCCGTGGCTTATTC 282
||||||||||||||||||||||| ||||||||| ||||||||
Sbjct 321 GTATTACCGCGGCTGCTGGCACGGAGTTAGCCGGTGCTTATTC 363
>seq265621
Length=2901
Score = 185 bits (204), Expect = 1e-44
Identities = 222/295 (75%), Gaps = 10/295 (3%)
Strand=Plus/Plus
Query 1 CCCACGCTTTCGCGCCTCAGCGTCAGTTACTGTCCAGCAATCCGCCTTCGCCACTGGTGT 60
|||||||||||| |||||||||||| | | || || | |||||||| | |||||
Sbjct 1585 CCCACGCTTTCGTGCCTCAGCGTCAATAAAACCATAGTAAGCTGCCTTCGCAATCGGTGT 1644
Query 61 TCCTCCGTATATCTACGCATTTCACCGCTACA---CACGGAATTCCGATTGCCTCTCCAG 117
|| ||||||| ||||||||||||||| ||| |||||| | |||||
Sbjct 1645 TCTGTGACATATCTATGCATTTCACCGCTACTTGTCAC---ATTCCGCCTACCTCTAGTT 1701
Query 118 CACTCAAGAAAAACAGTTTCAAATGCAG-GCTATGGGTTGAGCCCATAGT-TTTCACATC 175
|| ||||| | |||| |||| ||| || |||| ||||||| | || |||||| |
Sbjct 1702 CATTCAAGCTCATCAGTATCAAGGGCACTGCGATGG-TTGAGCC-ACCGTCTTTCACCCC 1759
Query 176 TGACTTGCCTTCCCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCAC 235
|||||| |||||||| | ||||||| ||||||||||||||||||||||||| |
Sbjct 1760 TGACTTAATAAGCCGCCTACGCACCCTTTAAACCCAATAAATCCGGATAACGCTTGGATC 1819
Query 236 CTACGTATTACCGCGGCTGCTGGCACGTAGTTAGCCGTGGCTTATTCCTCAGGTA 290
|| |||||||||||||||||||||||| ||||||||| ||||||||| ||||
Sbjct 1820 CTCCGTATTACCGCGGCTGCTGGCACGGAGTTAGCCGATCCTTATTCCTTCGGTA 1874
>seq70311
Length=274
Score = 181 bits (200), Expect = 2e-43
Identities = 194/251 (77%), Gaps = 4/251 (2%)
Strand=Plus/Plus
Query 1 CCCACGCTTTCGCGCCTCAGCGTCAGTTACTGTCCAGCAATCCGCCTTCGCCACTGGTGT 60
||||| |||||| |||||||||||||| | ||||||| || | |||||||| | ||| ||
Sbjct 26 CCCACACTTTCGTGCCTCAGCGTCAGTGAGTGTCCAGTAACCTGCCTTCGCAATTGGCGT 85
Query 61 TCCTCCGTATATCTACGCATTTCACCGCTACACACGGAATTCCGATTGCCTCTCCAGCAC 120
|| | ||||||| ||||||||||||||||| |||||| | ||||| || ||
Sbjct 86 TCTTGATCATATCTATGCATTTCACCGCTACACGATCAATTCCAGCTACCTCTGCACTAC 145
Query 121 TCAAGAAAAACAGTTTCAAATGCA-GGCTATGGGTTGAGCCCATAGT-TTTCACATCTGA 178
||||| | |||| |||| ||| || || |||||| | || || |||||| ||||
Sbjct 146 TCAAGTTTACCAGTATCAATGGCACTGCAAT-CGTTGAG-CGATCGTCTTTCACCACTGA 203
Query 179 CTTGCCTTCCCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTA 238
||| |||||||| | ||||||| |||||||||||||||| ||||||||| ||||
Sbjct 204 CTTAATAAACCGCCTACGCACCCTTTAAACCCAATAAATCCGGACAACGCTTGCACCCTA 263
Query 239 CGTATTACCGC 249
|||||||||||
Sbjct 264 CGTATTACCGC 274
>seq45962
Length=464
Score = 178 bits (196), Expect = 2e-42
Identities = 193/251 (77%), Gaps = 4/251 (2%)
Strand=Plus/Plus
Query 1 CCCACGCTTTCGCGCCTCAGCGTCAGTTACTGTCCAGCAATCCGCCTTCGCCACTGGTGT 60
||||| |||||| |||||||||||||| | ||||||| | | |||||||| | || ||
Sbjct 216 CCCACACTTTCGTGCCTCAGCGTCAGTGAGTGTCCAGTGACCTGCCTTCGCAATCGGCGT 275
Query 61 TCCTCCGTATATCTACGCATTTCACCGCTACACACGGAATTCCGATTGCCTCTCCAGCAC 120
|| | ||||||| ||||||||||||||||| ||||||| ||||| || ||
Sbjct 276 TCTTGATCATATCTATGCATTTCACCGCTACACGATCAATTCCGGCCACCTCTGCACTAC 335
Query 121 TCAAGAAAAACAGTTTCAAATGCA-GGCTATGGGTTGAGCCCATAGT-TTTCACATCTGA 178
||||| || |||| |||| ||| || || |||||| | || || |||||| ||||
Sbjct 336 TCAAGTGAACCAGTATCAATGGCACTGCAAT-CGTTGAG-CGATCGTCTTTCACCACTGA 393
Query 179 CTTGCCTTCCCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTA 238
||| |||||||| | ||||||| |||||||||||||||| ||||||||| ||||
Sbjct 394 CTTAATCCACCGCCTACGCACCCTTTAAACCCAATAAATCCGGACAACGCTTGCACCCTA 453
Query 239 CGTATTACCGC 249
|||||||||||
Sbjct 454 CGTATTACCGC 464
>seq35649
Length=525
Score = 167 bits (184), Expect = 4e-39
Identities = 200/272 (74%), Gaps = 0/272 (0%)
Strand=Plus/Plus
Query 1 CCCACGCTTTCGCGCCTCAGCGTCAGTTACTGTCCAGCAATCCGCCTTCGCCACTGGTGT 60
|||||||||||| || |||| |||| | | || || | | |||||||| | |||||
Sbjct 37 CCCACGCTTTCGTGCATCAGTGTCAATAAATGCTTAGACAGCTGCCTTCGCAATCGGTGT 96
Query 61 TCCTCCGTATATCTACGCATTTCACCGCTACACACGGAATTCCGATTGCCTCTCCAGCAC 120
|| ||||||| ||||||||||||||| |||||| | || || |
Sbjct 97 TCTGAGACATATCTATGCATTTCACCGCTACTTGTCTCATTCCGCCATCTTCAACATAAT 156
Query 121 TCAAGAAAAACAGTTTCAAATGCAGGCTATGGGTTGAGCCCATAGTTTTCACATCTGACT 180
||||| |||| ||||| ||| || ||||||||| || |||||| ||||||
Sbjct 157 TCAAGCTCTTCAGTATCAAAGGCACTGCATCGGTTGAGCCGATGTCTTTCACCCCTGACT 216
Query 181 TGCCTTCCCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACG 240
| | || ||||| | ||||||| ||||||||||||||||||||||||| ||| ||
Sbjct 217 TAAATAGCCACCTACGCACCCTTTAAACCCAATAAATCCGGATAACGCTTGGATCCTCCG 276
Query 241 TATTACCGCGGCTGCTGGCACGTAGTTAGCCG 272
|||||||||||||||||||||| |||||||||
Sbjct 277 TATTACCGCGGCTGCTGGCACGGAGTTAGCCG 308
Score = 75.2 bits (82), Expect = 2e-11
Identities = 58/69 (84%), Gaps = 0/69 (0%)
Strand=Plus/Plus
Query 222 ATAACGCTTGCCACCTACGTATTACCGCGGCTGCTGGCACGTAGTTAGCCGTGGCTTATT 281
|||||||||| ||| |||||||||||||||||||||||| ||||||||| ||||||
Sbjct 336 ATAACGCTTGGATCCTCCGTATTACCGCGGCTGCTGGCACGGAGTTAGCCGATCCTTATT 395
Query 282 CCTCAGGTA 290
| | ||||
Sbjct 396 CTTACGGTA 404
>seq125478
Length=564
Score = 163 bits (180), Expect = 5e-38
Identities = 211/286 (74%), Gaps = 4/286 (1%)
Strand=Plus/Minus
Query 1 CCCACGCTTTCGCGCCTCAGCGTCAGT-TACTGTCCAGCAATCCGCCTTCGCCACTGGTG 59
|||||||||||| | ||||||||| | || ||| || || | |||||||| | ||||
Sbjct 375 CCCACGCTTTCGTCCATCAGCGTCAATATATTGTT-AGTAACCTGCCTTCGCAATTGGTA 317
Query 60 TTCCTCCGTATATCTACGCATTTCACCGCTACACACGGAATTCCGATTGCCTCTCCAGCA 119
|||| ||||||| ||||||||||||||||| |||| || | || | | |
Sbjct 316 TTCCATGTAATATCTAAGCATTTCACCGCTACACTACATATTCTAGTTACTTCACAATAA 257
Query 120 CTCAAGAAAAACAGTTTCAAATGCAGG-CTATGGGTTGAGCCCATAGTTTTCACATCTGA 178
||||| ||||| |||| |||| | || | |||||| | |||||| ||||
Sbjct 256 TTCAAGTTCTACAGTATCAATGGCAGTTCGATAG-TTGAGCTACCGGATTTCACCACTGA 198
Query 179 CTTGCCTTCCCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTA 238
||| |||||||| ||||||| ||||||| | ||||||||||||||| |||
Sbjct 197 CTTATAAAACCGCCTACGGACCCTTTAAACCCAATGATTCCGGATAACGCTTGGATCCTC 138
Query 239 CGTATTACCGCGGCTGCTGGCACGTAGTTAGCCGTGGCTTATTCCT 284
|||||||||||||||||||||||| ||||||||| |||||||||
Sbjct 137 CGTATTACCGCGGCTGCTGGCACGGAGTTAGCCGATCCTTATTCCT 92
>seq361842
Length=689
Score = 156 bits (172), Expect = 7e-36
Identities = 211/288 (73%), Gaps = 12/288 (4%)
Strand=Plus/Plus
Query 1 CCCACGCTTTCGCGCCTCAGCGTCAGTTACTGTCCAGCAATCCGCCTTCGCCACTGGTGT 60
|||||||||||| ||||||| |||| | || | || | | |||||||| | |||||
Sbjct 26 CCCACGCTTTCGTGCCTCAGTGTCAATCACACTTTAGTGAGCTGCCTTCGCGATCGGTGT 85
Query 61 TCCTCCGTATATCTACGCATTTCACCGCTACA---CACGGAATTCCGATTGCCTCTCCAG 117
|| ||||||| ||||||||||||||| ||| |||||| | || | |
Sbjct 86 TCTGTGACATATCTATGCATTTCACCGCTACTTGTCAC---ATTCCGCCCACTTCAACTG 142
Query 118 CACTCAAGAAAAACAGTTTCAAATGCAG-GCTATGGGTTGAGC--CCATAGTTTTCACAT 174
| ||||| |||| ||||| ||| || | | || ||| || | ||||||
Sbjct 143 TATTCAAGCCCGGCAGTATCAAAGGCACTGCGACAG-TTAAGCTGCCGTC--TTTCACCC 199
Query 175 CTGACTTGCCTTCCCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCA 234
||||||| || || ||||| | ||||||| |||||||||||||||||||||||||
Sbjct 200 CTGACTTACCAGGCCACCTACGCACCCTTTAAACCCAATAAATCCGGATAACGCTTGGAT 259
Query 235 CCTACGTATTACCGCGGCTGCTGGCACGTAGTTAGCCGTGGCTTATTC 282
||| |||||||||||||||||||||||| ||||||||| |||||||
Sbjct 260 CCTCCGTATTACCGCGGCTGCTGGCACGGAGTTAGCCGATCCTTATTC 307
>seq102997
Length=950
Score = 152 bits (168), Expect = 8e-35
Identities = 217/297 (73%), Gaps = 14/297 (5%)
Strand=Plus/Plus
Query 1 CCCACGCTTTCGCGCCTCAGCGTCAGTTACTGTCC-AGCAATCCGCCTTCGCCACTGGTG 59
|||| ||| ||| ||||||| |||| | || ||| || | | |||||||| | ||||
Sbjct 384 CCCATGCTCTCGTGCCTCAGTGTCAATCAC-GTCGTAGTAGCCTGCCTTCGCAATCGGTG 442
Query 60 TTCCTCCGT-ATATCTACGCATTTCACCGCTACA---CACGGAATTCCGATTGCCTCTCC 115
||| | || ||||||| |||||||||||||||| | || ||||| | || |
Sbjct 443 TTC-TGGGTCATATCTATGCATTTCACCGCTACATGACCCG---TTCCGGCTACCGCCAA 498
Query 116 AGCACTCAAGAAAAACAGTTTCAAATGCAGGCTATGG--GTTGAGCCCATAGTTTTCACA 173
||| ||||| ||||||| | || | || ||| ||| || ||||| |
Sbjct 499 CGCATTCAAGTTCCTCAGTTTCCA--GCCACATCTGATCGTTAAGCGACCAGCTTTCAAA 556
Query 174 TCTGACTTGCCTTCCCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCC 233
| ||||| || ||||| | ||||||| |||||||||||||||| |||||||||
Sbjct 557 CCAGACTTAAAAAACCACCTACGCACCCTTTAAACCCAATAAATCCGGACAACGCTTGCA 616
Query 234 ACCTACGTATTACCGCGGCTGCTGGCACGTAGTTAGCCGTGGCTTATTCCTCAGGTA 290
||| |||||||||||||||||||||||| ||||||||| ||||||||||| ||||
Sbjct 617 CCCTCCGTATTACCGCGGCTGCTGGCACGGAGTTAGCCGGTGCTTATTCCTCTGGTA 673
>seq40001
Length=498
Score = 141 bits (156), Expect = 2e-31
Identities = 93/103 (90%), Gaps = 0/103 (0%)
Strand=Plus/Plus
Query 188 CCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACGTATTACC 247
|||||| ||||| |||||| |||||||| |||||| |||||||||| |||||||||||||
Sbjct 218 CCGCCTGCACGCGCTTTACGCCCAATAATTCCGGACAACGCTTGCCCCCTACGTATTACC 277
Query 248 GCGGCTGCTGGCACGTAGTTAGCCGTGGCTTATTCCTCAGGTA 290
||||||||||||||||||||||||| ||||| | ||||||||
Sbjct 278 GCGGCTGCTGGCACGTAGTTAGCCGGGGCTTTCTTCTCAGGTA 320
>seq518492
Length=331
Score = 131 bits (144), Expect = 3e-28
Identities = 90/102 (88%), Gaps = 0/102 (0%)
Strand=Plus/Plus
Query 1 CCCACGCTTTCGCGCCTCAGCGTCAGTTACTGTCCAGCAATCCGCCTTCGCCACTGGTGT 60
||||||||||||| ||||||||||| | | |||||| || |||||||||||||||||||
Sbjct 230 CCCACGCTTTCGCACCTCAGCGTCAATCCCGGTCCAGTAAGCCGCCTTCGCCACTGGTGT 289
Query 61 TCCTCCGTATATCTACGCATTTCACCGCTACACACGGAATTC 102
|| |||| ||||||||| |||||||| |||||| ||||||||
Sbjct 290 TCTTCCGAATATCTACGAATTTCACCTCTACACTCGGAATTC 331
>seq343732
Length=424
Score = 113 bits (124), Expect = 7e-23
Identities = 82/95 (86%), Gaps = 0/95 (0%)
Strand=Plus/Minus
Query 188 CCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACGTATTACC 247
|||||||| || |||||| |||| ||| |||||| |||||| || |||||||||||||
Sbjct 200 CCGCCTACGAGCTCTTTACGCCCAGTAACTCCGGACAACGCTCGCACCCTACGTATTACC 141
Query 248 GCGGCTGCTGGCACGTAGTTAGCCGTGGCTTATTC 282
||||||||||||||||||||||||| |||| |||
Sbjct 140 GCGGCTGCTGGCACGTAGTTAGCCGGTGCTTCTTC 106
Score = 89.7 bits (98), Expect = 8e-16
Identities = 70/84 (83%), Gaps = 0/84 (0%)
Strand=Plus/Minus
Query 42 CCGCCTTCGCCACTGGTGTTCCTCCGTATATCTACGCATTTCACCGCTACACACGGAATT 101
||||||||||||| ||||||||||| |||||| |||||||||||||||||| ||||||
Sbjct 423 CCGCCTTCGCCACCGGTGTTCCTCCTGATATCTGCGCATTTCACCGCTACACCAGGAATT 364
Query 102 CCGATTGCCTCTCCAGCACTCAAG 125
||| | || || | | |||| ||
Sbjct 363 CCGGTCTCCCCTACCGAACTCTAG 340
>seq180841
Length=292
Score = 109 bits (120), Expect = 9e-22
Identities = 86/103 (83%), Gaps = 0/103 (0%)
Strand=Plus/Minus
Query 1 CCCACGCTTTCGCGCCTCAGCGTCAGTTACTGTCCAGCAATCCGCCTTCGCCACTGGTGT 60
|||||||| |||||||||||||||||| | | |||| ||||||||||||| |||||
Sbjct 103 CCCACGCTGTCGCGCCTCAGCGTCAGTAATGGACCAGGTTGCCGCCTTCGCCACCGGTGT 44
Query 61 TCCTCCGTATATCTACGCATTTCACCGCTACACACGGAATTCC 103
|| ||| ||||||||| |||||||| |||||| ||||||||
Sbjct 43 TCTTCCCAATATCTACGAATTTCACCTCTACACTGGGAATTCC 1
>seq171352
Length=33502
Score = 100 bits (110), Expect = 5e-19
Identities = 76/90 (84%), Gaps = 0/90 (0%)
Strand=Plus/Minus
Query 201 CTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACGTATTACCGCGGCTGCTGGCA 260
|||||| |||||| | |||||||||||||||| ||| || ||||||||||||||||||
Sbjct 30192 CTTTACGCCCAATCATTCCGGATAACGCTTGCATCCTCTGTCTTACCGCGGCTGCTGGCA 30133
Query 261 CGTAGTTAGCCGTGGCTTATTCCTCAGGTA 290
| ||||||||| |||||||||||| ||
Sbjct 30132 CAGAGTTAGCCGATTCTTATTCCTCAGATA 30103
>seq142100
Length=237
Score = 100 bits (110), Expect = 5e-19
Identities = 67/75 (89%), Gaps = 0/75 (0%)
Strand=Plus/Plus
Query 216 ATCCGGATAACGCTTGCCACCTACGTATTACCGCGGCTGCTGGCACGTAGTTAGCCGTGG 275
||||||| ||||||||| |||||||||||||||||||||||||||||||||||||| |
Sbjct 1 ATCCGGACAACGCTTGCACCCTACGTATTACCGCGGCTGCTGGCACGTAGTTAGCCGGTG 60
Query 276 CTTATTCCTCAGGTA 290
||||||| |||||
Sbjct 61 CTTATTCGATAGGTA 75
>seq86598
Length=14488
Score = 95.1 bits (104), Expect = 2e-17
Identities = 192/285 (67%), Gaps = 0/285 (0%)
Strand=Plus/Minus
Query 6 GCTTTCGCGCCTCAGCGTCAGTTACTGTCCAGCAATCCGCCTTCGCCACTGGTGTTCCTC 65
||||||| ||||| |||||| | | |||||| || || | |||||||| |
Sbjct 2562 GCTTTCGTCTCTCAGTGTCAGTGTCGGCCCAGCAGAGTGCTTTTGATGTTGGTGTTCTTT 2503
Query 66 CGTATATCTACGCATTTCACCGCTACACACGGAATTCCGATTGCCTCTCCAGCACTCAAG 125
||| || | ||||||||||||| || | ||||| |||| || | |||| ||
Sbjct 2502 TTTATCTCAATGCATTTCACCGCTCCATCGGAAATTCTCTCTGCCCCTACCATACTCCAG 2443
Query 126 AAAAACAGTTTCAAATGCAGGCTATGGGTTGAGCCCATAGTTTTCACATCTGACTTGCCT 185
|||||| | || | ||||||||||| | ||| | | ||||||
Sbjct 2442 CTTGGTAGTTTCCACCGCCTGTCCAGGGTTGAGCCCTGGGATTTGATGGCGGACTTGAAA 2383
Query 186 TCCCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACGTATTA 245
|| |||||| | ||||| |||||| | ||||||||| |||||| || | |||
Sbjct 2382 AGCCACCTACAGACGCTTTATGCCCAATCATTCCGGATAATGCTTGCATTCTCTATCTTA 2323
Query 246 CCGCGGCTGCTGGCACGTAGTTAGCCGTGGCTTATTCCTCAGGTA 290
| |||| ||||||||| |||||| || ||||||||||||| ||
Sbjct 2322 CTGCGGTTGCTGGCACAGAGTTAGTCGATGCTTATTCCTCAGATA 2278
>seq323032
Length=3878
Score = 91.5 bits (100), Expect = 2e-16
Identities = 191/285 (67%), Gaps = 0/285 (0%)
Strand=Plus/Plus
Query 6 GCTTTCGCGCCTCAGCGTCAGTTACTGTCCAGCAATCCGCCTTCGCCACTGGTGTTCCTC 65
||||||| || || || ||| | | |||||| || || |||| |||||||| |
Sbjct 3036 GCTTTCGTCTCTTAGTGTTAGTGTCGGCCCAGCAGAGTGCTTTTGCCATTGGTGTTCTTT 3095
Query 66 CGTATATCTACGCATTTCACCGCTACACACGGAATTCCGATTGCCTCTCCAGCACTCAAG 125
| || || | ||||||||| ||| ||| | |||||| |||| || | | |||| ||
Sbjct 3096 CCGATCTCAATGCATTTCACTGCTCCACCAGAAATTCCCTCTGCCCCTACCGTACTCCAG 3155
Query 126 AAAAACAGTTTCAAATGCAGGCTATGGGTTGAGCCCATAGTTTTCACATCTGACTTGCCT 185
|||||| | || | ||||||||||| | ||| || ||||||
Sbjct 3156 CTTGGTAGTTTCCACCGCCTGTCCAGGGTTGAGCCCTGGGATTTGACTGTGGACTTGAAA 3215
Query 186 TCCCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACGTATTA 245
|| |||||| |||| || || | |||||| |||| ||| ||| | |||
Sbjct 3216 AGCCACCTACAGATGCTTTGTGCCTTATCATTCCGGAGAACGTCTGCATCCTCTATCTTA 3275
Query 246 CCGCGGCTGCTGGCACGTAGTTAGCCGTGGCTTATTCCTCAGGTA 290
|||||||||||||||| |||||| | ||||||||||||| ||
Sbjct 3276 CCGCGGCTGCTGGCACAGAGTTAGATGATGCTTATTCCTCAGATA 3320
>seq353491
Length=550
Score = 87.8 bits (96), Expect = 3e-15
Identities = 65/76 (86%), Gaps = 0/76 (0%)
Strand=Plus/Minus
Query 215 AATCCGGATAACGCTTGCCACCTACGTATTACCGCGGCTGCTGGCACGTAGTTAGCCGTG 274
||||||||||||||||| ||| |||||||||||||||||||||||| |||||||||
Sbjct 412 AATCCGGATAACGCTTGGATCCTCCGTATTACCGCGGCTGCTGGCACGGAGTTAGCCGAT 353
Query 275 GCTTATTCCTCAGGTA 290
||||||| | ||||
Sbjct 352 CCTTATTCTTACGGTA 337
Score = 78.8 bits (86), Expect = 2e-12
Identities = 58/68 (85%), Gaps = 0/68 (0%)
Strand=Plus/Minus
Query 223 TAACGCTTGCCACCTACGTATTACCGCGGCTGCTGGCACGTAGTTAGCCGTGGCTTATTC 282
||||||| | ||| |||||||||||||||||||||||| ||||||||| |||||||
Sbjct 550 TAACGCTCGGATCCTCCGTATTACCGCGGCTGCTGGCACGGAGTTAGCCGATCCTTATTC 491
Query 283 CTCAGGTA 290
|||||||
Sbjct 490 TTCAGGTA 483
>seq514564
Length=378
Score = 86.0 bits (94), Expect = 1e-14
Identities = 135/188 (72%), Gaps = 4/188 (2%)
Strand=Plus/Plus
Query 44 GCCTTCGCCACTGGTGTTCCTCCGTATATCTACGCATTTCACCGCTACACACGGAATTCC 103
|||||||| | ||||||| ||||||| ||||||||||||||| |||||
Sbjct 193 GCCTTCGCAATCGGTGTTCTGAGACATATCTATGCATTTCACCGCTACTTGTCTCATTCC 252
Query 104 GATTGCCTCTCCAGCACTCAAGAAAAACAGTTTCAAATGCAG-GCTATGGGTTGAGCCCA 162
| | ||||| || ||||| |||| |||| ||| || || | |||||| |
Sbjct 253 GCCTACCTCTAGTCCATTCAAGCCCGTCAGTATCAAGGGCACTGCGATAG-TTGAGCT-A 310
Query 163 TAGT-TTTCACATCTGACTTGCCTTCCCGCCTACACGCCCTTTACACCCAATAAATCCGG 221
|| |||||| ||||||| | |||||||| | ||||||| |||||||||||||||
Sbjct 311 CCGTCTTTCACCCCTGACTTAACAGGCCGCCTACGCACCCTTTAAACCCAATAAATCCGG 370
Query 222 ATAACGCT 229
||||||||
Sbjct 371 ATAACGCT 378
>seq301880
Length=292
Score = 80.6 bits (88), Expect = 4e-13
Identities = 68/84 (81%), Gaps = 0/84 (0%)
Strand=Plus/Plus
Query 167 TTTCACATCTGACTTGCCTTCCCGCCTACACGCCCTTTACACCCAATAAATCCGGATAAC 226
|||||| ||||||| |||||||| | ||||||| ||||||||||||||||||||
Sbjct 209 TTTCACTCCTGACTTAAAAAACCGCCTACGCACCCTTTAAACCCAATAAATCCGGATAAC 268
Query 227 GCTTGCCACCTACGTATTACCGCG 250
||| | ||| ||||||||||||
Sbjct 269 GCTCGGATCCTCCGTATTACCGCG 292
>seq510453
Length=342
Score = 75.2 bits (82), Expect = 2e-11
Identities = 71/91 (78%), Gaps = 0/91 (0%)
Strand=Plus/Plus
Query 1 CCCACGCTTTCGCGCCTCAGCGTCAGTTACTGTCCAGCAATCCGCCTTCGCCACTGGTGT 60
|||||||||||| |||||||||||| | | | || || | |||||||| | ||||||
Sbjct 234 CCCACGCTTTCGTGCCTCAGCGTCAATCAGACTTTAGTAAGCTGCCTTCGCAATTGGTGT 293
Query 61 TCCTCCGTATATCTACGCATTTCACCGCTAC 91
|| ||||||| |||||||||||||||
Sbjct 294 TCTGTGACATATCTATGCATTTCACCGCTAC 324
>seq243559
Length=319
Score = 75.2 bits (82), Expect = 2e-11
Identities = 65/81 (80%), Gaps = 0/81 (0%)
Strand=Plus/Plus
Query 167 TTTCACATCTGACTTGCCTTCCCGCCTACACGCCCTTTACACCCAATAAATCCGGATAAC 226
|||||| ||||||| || ||||| | ||||||| ||||||||||||||||||||
Sbjct 239 TTTCACCCCTGACTTAATAGGCCACCTACGCACCCTTTAAACCCAATAAATCCGGATAAC 298
Query 227 GCTTGCCACCTACGTATTACC 247
||||| ||| |||||||||
Sbjct 299 GCTTGGATCCTCCGTATTACC 319
>seq296954
Length=1374
Score = 73.4 bits (80), Expect = 7e-11
Identities = 77/98 (79%), Gaps = 4/98 (4%)
Strand=Plus/Minus
Query 188 CCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACGTATTACC 247
|||||||| |||| || |||| | | || ||||| || ||| ||| ||| |||||
Sbjct 212 CCGCCTACGTACCCT--ACGCCCAGTCATCACGAATAACACTAGCCCCCTCCGTTTTACC 155
Query 248 GCGGCTGCTGGCACGTAGTTAGCCGTGGCTTATTCCTC 285
||||||||| ||||| ||||||||| |||||||| |||
Sbjct 154 GCGGCTGCT-GCACGAAGTTAGCCG-GGCTTATTACTC 119
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 824579740817
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |