Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Eleusine_20coracana_20subsp._20coracana_20[genbank_20GCA_5F002180455
.1_202017-06-08] 525,627 sequences; 1,195,986,209 total letters
Query= AAMG01001884.1
Length=191
Score E
Sequences producing significant alignments: (Bits) Value
seq226614 291 8e-77
seq473804 224 1e-56
seq458102 215 5e-54
seq237230 136 4e-30
seq228227 134 1e-29
seq365537 131 2e-28
seq141868 129 6e-28
seq420198 125 7e-27
seq360559 125 7e-27
seq162763 125 7e-27
seq158785 125 7e-27
seq133673 125 7e-27
seq123127 125 7e-27
seq47819 125 7e-27
seq478359 122 9e-26
seq309229 122 9e-26
seq308515 122 9e-26
seq256824 122 9e-26
seq150423 122 9e-26
seq456811 120 3e-25
seq523016 116 4e-24
seq342117 116 4e-24
seq256932 116 4e-24
seq186638 116 4e-24
seq491185 113 5e-23
seq152511 113 5e-23
seq298065 104 2e-20
seq263020 104 2e-20
seq188437 102 8e-20
seq131970 102 8e-20
seq491352 100 3e-19
seq416877 96.9 4e-18
seq15692 96.9 4e-18
seq188736 89.7 5e-16
>seq226614
Length=493
Score = 291 bits (322), Expect = 8e-77
Identities = 180/191 (94%), Gaps = 1/191 (1%)
Strand=Plus/Minus
Query 1 GGAACCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGAATA 60
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 402 GGAACCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATA 343
Query 61 CATTACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGC 120
||||| |||||||||||||||||||||||| ||||||||||||| ||||||||||||||
Sbjct 342 CATTAGCATGGAATAATAGAATAGGACGTGTGGTTCTATTTTGTTGGTTTCTAGGACCG- 284
Query 121 CCGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTC 180
|||||||||| |||| ||||||||||||| |||||||||||| |||| |||||||||||
Sbjct 283 CCGTAATGATTAATAGGGATAGTCGGGGGCATCAGTATTCAATCGTCAGAGGTGAAATTC 224
Query 181 TTGGATTTATT 191
|||||||||||
Sbjct 223 TTGGATTTATT 213
>seq473804
Length=1692
Score = 224 bits (248), Expect = 1e-56
Identities = 162/186 (87%), Gaps = 1/186 (1%)
Strand=Plus/Plus
Query 1 GGAACCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGAATA 60
|||| |||||| |||||| |||||||||||||| | || | |||||||| ||||||||||
Sbjct 1443 GGAAACAGGACGTTTACTGTGAAAAAATTAGAGTGCTCCAGGCAGGCCTATGCTCGAATA 1502
Query 61 CATTACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGC 120
|||| ||||||||||| |||||||||||| ||| ||||| || ||||||||||||||
Sbjct 1503 GATTAGCATGGAATAATGGAATAGGACGTGTGGTCTTATTTCGTTGGTTTCTAGGACCG- 1561
Query 121 CCGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTC 180
|||||||||| |||| ||| ||||||||| |||||||||||| |||| |||||||||||
Sbjct 1562 CCGTAATGATTAATAGGGACAGTCGGGGGCATCAGTATTCAATCGTCAGAGGTGAAATTC 1621
Query 181 TTGGAT 186
||||||
Sbjct 1622 TTGGAT 1627
>seq458102
Length=237
Score = 215 bits (238), Expect = 5e-54
Identities = 153/174 (88%), Gaps = 1/174 (1%)
Strand=Plus/Minus
Query 16 ACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGAATACATTACCATGGAATA 75
|||||||||||||||||| ||||||||||||||||||||||||||| ||| |||||||||
Sbjct 237 ACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACGTTAGCATGGAATA 178
Query 76 ATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGATAAATA 135
||| |||||| |||||| ||||||||||| ||||||||| || ||| |||||| || |
Sbjct 177 ATAAAATAGGGCGTGCGTTTCTATTTTGTTGGTTTCTAGAGACG-CCGCAATGATTAACA 119
Query 136 CGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGATTTA 189
| | ||||||||| |||||||||| |||||| ||||||||||||||||||||
Sbjct 118 GGAACAGTCGGGGGCATCAGTATTCAGTTGTCAGAGGTGAAATTCTTGGATTTA 65
>seq237230
Length=330
Score = 136 bits (150), Expect = 4e-30
Identities = 137/186 (74%), Gaps = 17/186 (9%)
Strand=Plus/Plus
Query 1 GGAACCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGAATA 60
|||| |||||| ||||||||||||||||||||| | || | |||||||| ||||||||||
Sbjct 96 GGAAACAGGACATTTACTTTGAAAAAATTAGAGTGCTCCAGGCAGGCCTATGCTCGAATA 155
Query 61 CATTACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGC 120
||||| |||||||||||| ||||||||
Sbjct 156 CATTAGCATGGAATAATA----------------NNNNNNNNNNNNNNNNATAGGACCG- 198
Query 121 CCGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTC 180
|||||||||| |||| ||| ||||||||| ||||||||||| ||||| |||||||||||
Sbjct 199 CCGTAATGATTAATAGGGACAGTCGGGGGCATCAGTATTCAACTGTCAGAGGTGAAATTC 258
Query 181 TTGGAT 186
||||||
Sbjct 259 TTGGAT 264
>seq228227
Length=6551
Score = 134 bits (148), Expect = 1e-29
Identities = 139/178 (78%), Gaps = 3/178 (2%)
Strand=Plus/Plus
Query 14 TTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTC-GAATACATTACCATGGA 72
|||||||||| ||||||||| | |||||||| ||| | |||| | |||||||| |||||
Sbjct 2841 TTACTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCATCGCTCTGGATACATTAGCATGGG 2900
Query 73 ATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGATAA 132
|||| | |||||| | |||| ||||| ||| || | ||| || |||||||| |
Sbjct 2901 ATAACATCATAGGAT-TCCGGTCCTATTGTGTTGGCCTTCGGGATCGGA-GTAATGATTA 2958
Query 133 ATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGATTTAT 190
||| ||| ||||||||| | ||||| || |||| |||||||||||||||||||||
Sbjct 2959 ATAGGGACAGTCGGGGGCATTCGTATTTCATAGTCAGAGGTGAAATTCTTGGATTTAT 3016
>seq365537
Length=11740
Score = 131 bits (144), Expect = 2e-28
Identities = 138/178 (78%), Gaps = 3/178 (2%)
Strand=Plus/Plus
Query 14 TTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTC-GAATACATTACCATGGA 72
|||||||||| ||||||||| | |||||||| ||| | |||| | |||||||| |||||
Sbjct 8074 TTACTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCATCGCTCTGCATACATTAGCATGGG 8133
Query 73 ATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGATAA 132
|||| | |||||| | |||| ||||| ||| || | ||| || |||||||| |
Sbjct 8134 ATAACATCATAGGAT-TCCGGTCCTATTGTGTTGGCCTTCGGGATCGGA-GTAATGATTA 8191
Query 133 ATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGATTTAT 190
||| ||||||||||||| | ||||| || || | || ||||||||||||||||||
Sbjct 8192 ATAGGGATAGTCGGGGGCATTCGTATTACATAGTTAGAGATGAAATTCTTGGATTTAT 8249
>seq141868
Length=6844
Score = 129 bits (142), Expect = 6e-28
Identities = 138/177 (78%), Gaps = 4/177 (2%)
Strand=Plus/Minus
Query 15 TACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTC-GAATACATTACCATGGAA 73
||||||||| ||||||||| | |||||||| ||| | |||| | |||||||| ||||| |
Sbjct 5952 TACTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCATCGCTCTGGATACATTAGCATGGGA 5893
Query 74 TAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGATAAA 133
||| | |||||| | |||| ||||| ||| || | ||| || |||||||| |
Sbjct 5892 TAACATCATAGGAT-TCCGGTCCTATTGTGTTGGCCTTCGGGATCGGA-GTAATGATTA- 5836
Query 134 TACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGATTTAT 190
|| ||||||||||||| | ||||| || |||| |||||||||||||||||||||
Sbjct 5835 TAGGGATAGTCGGGGGCATTCGTATTTCATAGTCAGAGGTGAAATTCTTGGATTTAT 5779
Score = 113 bits (124), Expect = 5e-23
Identities = 134/178 (75%), Gaps = 3/178 (2%)
Strand=Plus/Plus
Query 14 TTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTC-GAATACATTACCATGGA 72
|||||||||| ||||||||| | |||||||| ||| | || | | |||||||| |||||
Sbjct 715 TTACTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCATCGCACTGGATACATTAGCATGGG 774
Query 73 ATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGATAA 132
|||| | |||||| | | || || || ||| || | ||| | |||||||| |
Sbjct 775 ATAACATCATAGGAT-TCCAGTCCTGTTGTGTTGGCCTTCGGGATCAGA-GTAATGATTA 832
Query 133 ATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGATTTAT 190
||| |||||| | |||| | ||||| || |||| |||||||||||||||||||||
Sbjct 833 ATAGGGATAGACAGGGGCATTTGTATTTCATAGTCAGAGGTGAAATTCTTGGATTTAT 890
>seq420198
Length=9626
Score = 125 bits (138), Expect = 7e-27
Identities = 137/178 (77%), Gaps = 3/178 (2%)
Strand=Plus/Plus
Query 14 TTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTC-GAATACATTACCATGGA 72
|||||||||| |||||| || | |||||||| ||| | |||| | |||||||| |||||
Sbjct 696 TTACTTTGAAGAAATTACAGTGCTCAAAGCAAGCCATCGCTCTGGATACATTAGCATGGG 755
Query 73 ATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGATAA 132
|||| | |||||| | |||| ||||| ||| || | | ||| || | |||||| |
Sbjct 756 ATAACATCATAGGAT-TCCGGTCCTATTGTGTTGGCCTTTGGGATCGGAGG-AATGATTA 813
Query 133 ATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGATTTAT 190
||| |||||||| ||| | ||||| || |||| |||||||||||||||||||||
Sbjct 814 ATAGGGATAGTCAAGGGCATTCGTATTTCATAGTCAGAGGTGAAATTCTTGGATTTAT 871
>seq360559
Length=2807
Score = 125 bits (138), Expect = 7e-27
Identities = 137/178 (77%), Gaps = 3/178 (2%)
Strand=Plus/Plus
Query 14 TTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTC-GAATACATTACCATGGA 72
|||||||||| ||||||||| | |||||||| ||| | |||| | |||||||| |||||
Sbjct 1674 TTACTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCATCGCTCTGGATACATTAGCATGGG 1733
Query 73 ATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGATAA 132
|||| | |||||| | ||| ||||| ||| || | ||| | |||||||| |
Sbjct 1734 ATAACATCATAGGAT-TCTGGTCCTATTGTGTTGGCCTTCGGGATTGGA-GTAATGATTA 1791
Query 133 ATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGATTTAT 190
||| ||| ||||||||| | ||||| || |||| |||||||||||||||||||||
Sbjct 1792 ATAGGGACAGTCGGGGGCATTCGTATTTCATAGTCAGAGGTGAAATTCTTGGATTTAT 1849
>seq162763
Length=7684
Score = 125 bits (138), Expect = 7e-27
Identities = 137/178 (77%), Gaps = 3/178 (2%)
Strand=Plus/Minus
Query 14 TTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTC-GAATACATTACCATGGA 72
|||||||||| ||||||||| | |||||||| ||| | |||| | |||||||| |||||
Sbjct 2691 TTACTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCATCGCTCTGGATACATTAGCATGGG 2632
Query 73 ATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGATAA 132
|||| | |||| | | ||| ||||| ||| || | ||| || |||||||| |
Sbjct 2631 ATAACATCATAGAAT-TCTGGTCCTATTGTGTTGGCCTTCGGGATCGAA-GTAATGATTA 2574
Query 133 ATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGATTTAT 190
||| ||||||||| ||| | ||||| || |||| |||||||||||||||||||||
Sbjct 2573 ATAGGGATAGTCGAGGGCATTCGTATTTCATAGTCAGAGGTGAAATTCTTGGATTTAT 2516
>seq158785
Length=18160
Score = 125 bits (138), Expect = 7e-27
Identities = 137/178 (77%), Gaps = 3/178 (2%)
Strand=Plus/Plus
Query 14 TTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTC-GAATACATTACCATGGA 72
|||||||||| |||||| || | |||||||| ||| | |||| | |||||||| |||||
Sbjct 9990 TTACTTTGAAGAAATTATAGTGCTCAAAGCAAGCCATCGCTCTGGATACATTAGCATGGG 10049
Query 73 ATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGATAA 132
|||| | |||||| | |||| ||||| ||| || | ||| || |||||||| |
Sbjct 10050 ATAACATCATAGGAT-TCCGGTCCTATTGTGTTGGCCTTCGGGATCGGA-GTAATGATTA 10107
Query 133 ATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGATTTAT 190
||| ||| ||||||||| | ||||| || |||| ||||||| |||||||||||||
Sbjct 10108 ATAGGGACAGTCGGGGGCATTCGTATTTCATAGTCAGAGGTGAAGTTCTTGGATTTAT 10165
Score = 80.6 bits (88), Expect = 3e-13
Identities = 99/133 (74%), Gaps = 2/133 (2%)
Strand=Plus/Plus
Query 58 ATACATTACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGAC 117
|||||||| ||||| |||| | |||||| | |||| ||||| ||| || | | ||
Sbjct 2847 ATACATTAGCATGGGATAACACCATAGGAT-TCCGGTCCTATTATGTTGGCCTTTGAGAT 2905
Query 118 CGCCCGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAA 177
|| |||||||| ||| ||| |||||||| | |||| || |||| ||||||||
Sbjct 2906 CGGA-GTAATGATTAATTGGGACAGTCGGGGACATTCATATTTCATAGTCAGAGGTGAAA 2964
Query 178 TTCTTGGATTTAT 190
|||||||||||||
Sbjct 2965 TTCTTGGATTTAT 2977
>seq133673
Length=25116
Score = 125 bits (138), Expect = 7e-27
Identities = 137/178 (77%), Gaps = 3/178 (2%)
Strand=Plus/Minus
Query 14 TTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTC-GAATACATTACCATGGA 72
|||||||||| ||||||||| | |||||||| ||| | |||| | |||||||| |||||
Sbjct 12227 TTACTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCATCGCTCTGGATACATTAGCATGGG 12168
Query 73 ATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGATAA 132
|||| | |||||| | |||| ||||| || || | |||| || |||||||| |
Sbjct 12167 ATAACATCATAGGAT-TCCGGTCCTATTGCGTTGGCCTTCAGGATCGGA-GTAATGATTA 12110
Query 133 ATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGATTTAT 190
|| ||| ||||||||| | ||||| || ||| |||||||||||||||||||||
Sbjct 12109 TTAGGGACAGTCGGGGGCATTCGTATTTCATAGTCGGAGGTGAAATTCTTGGATTTAT 12052
>seq123127
Length=11400
Score = 125 bits (138), Expect = 7e-27
Identities = 137/178 (77%), Gaps = 3/178 (2%)
Strand=Plus/Minus
Query 14 TTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTC-GAATACATTACCATGGA 72
|||||||||| ||||||||| | |||||||| ||| | |||| | |||||||| |||||
Sbjct 8470 TTACTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCATCGCTCTGGATACATTAGCATGGG 8411
Query 73 ATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGATAA 132
|||| | |||||| | |||| ||||| ||| || | ||| || |||||||| |
Sbjct 8410 ATAACATCATAGGAT-TCCGGTCCTATTGTGTTGGCCTTCGGGATCGGA-GTAATGATTA 8353
Query 133 ATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGATTTAT 190
||| ||| |||||| || | ||||| || |||| ||||||||||||| |||||||
Sbjct 8352 ATATGGACAGTCGGCGGCATTCGTATTTCATAGTCAGAGGTGAAATTCTTAGATTTAT 8295
>seq47819
Length=2235
Score = 125 bits (138), Expect = 7e-27
Identities = 138/179 (77%), Gaps = 5/179 (3%)
Strand=Plus/Minus
Query 14 TTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTC-GAATACATTACCATGGA 72
|||||||||| ||||||||| | |||||||| ||| | |||| | |||||||| |||||
Sbjct 2074 TTACTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCATCGCTCTGGATACATTAGCATGGG 2015
Query 73 ATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGT-TTCTAGGACCGCCCGTAATGATA 131
|||| | |||||| | |||| ||||| ||| || ||| | | | ||||||||
Sbjct 2014 ATAACATCATAGGAT-TCCGGTCCTATTGTGTTGGCCTTCGCGATCAGA--GTAATGATT 1958
Query 132 AATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGATTTAT 190
|||| ||| |||| |||| | ||||| || |||| |||||||||||||||||||||
Sbjct 1957 AATAGGGACAGTCAGGGGCATTCGTATTTCATAGTCAGAGGTGAAATTCTTGGATTTAT 1899
>seq478359
Length=3233
Score = 122 bits (134), Expect = 9e-26
Identities = 136/178 (76%), Gaps = 3/178 (2%)
Strand=Plus/Plus
Query 14 TTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTC-GAATACATTACCATGGA 72
|||||||||| ||||||||| | |||||||| ||| | ||| | |||||||| |||||
Sbjct 1769 TTACTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCATCGCTTTGGATACATTAGCATGGG 1828
Query 73 ATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGATAA 132
||| |||||| | |||| ||||| ||| || | ||| || |||||||| |
Sbjct 1829 ATATCTTCATAGGAT-TCCGGTCCTATTGTGTTGGCCTTCGGGATCGGA-GTAATGATTA 1886
Query 133 ATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGATTTAT 190
||| ||| ||||||||| | ||||| || |||| |||||||||||||||||||||
Sbjct 1887 ATAGGGACAGTCGGGGGCATTCGTATTTCATAGTCAGAGGTGAAATTCTTGGATTTAT 1944
>seq309229
Length=7968
Score = 122 bits (134), Expect = 9e-26
Identities = 139/183 (76%), Gaps = 4/183 (2%)
Strand=Plus/Plus
Query 6 CAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTT--TGCTCGAATACAT 63
||| || ||||||||||| ||||| ||| | |||||||||||||| ||| ||| |
Sbjct 2149 CAGCACGTTTACTTTGAACAAATTTGAGTGCTCAAAGCAGGCCTTTGTGCCTGAAAATTC 2208
Query 64 TACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCG 123
| ||||||||||| ||||||||| | |||||||||||||| ||||| | ||| | |
Sbjct 2209 TTGCATGGAATAATGGAATAGGAC-TTCGGTTCTATTTTGTTGGTTT-TCGGATCCGAAG 2266
Query 124 TAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTG 183
||||| | || | ||| || |||||| | |||| ||| | ||||||||||||||
Sbjct 2267 TAATGGTTAAGAGGGACAGACGGGGGCATTTGTATGGCGGTGTTAGAGGTGAAATTCTTG 2326
Query 184 GAT 186
|||
Sbjct 2327 GAT 2329
>seq308515
Length=629
Score = 122 bits (134), Expect = 9e-26
Identities = 136/178 (76%), Gaps = 3/178 (2%)
Strand=Plus/Minus
Query 14 TTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGA-ATACATTACCATGGA 72
|||||||||| ||||||||| | |||||||| ||| | |||| |||||||| |||||
Sbjct 326 TTACTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCATCGCTCTCGATACATTAGCATGGG 267
Query 73 ATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGATAA 132
|||| | |||||| | |||| ||||| ||| || | ||| || |||||||| |
Sbjct 266 ATAACATTATAGGAT-TCCGGTCCTATTATGTTGGCCTTCGGGATCGGA-GTAATGATTA 209
Query 133 ATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGATTTAT 190
||| ||| | || |||| | ||||| || |||| |||||||||||||||||||||
Sbjct 208 ATAGGGACAATCAGGGGCATTTGTATTTCATAGTCAGAGGTGAAATTCTTGGATTTAT 151
>seq256824
Length=4348
Score = 122 bits (134), Expect = 9e-26
Identities = 136/178 (76%), Gaps = 3/178 (2%)
Strand=Plus/Plus
Query 14 TTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTC-GAATACATTACCATGGA 72
|||||||||| ||||||||| | |||||||| ||| | ||| | |||||||| |||||
Sbjct 1812 TTACTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCATCGCTTTGGATACATTAGCATGGG 1871
Query 73 ATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGATAA 132
||| |||||| | |||| ||||| ||| || | ||| || |||||||| |
Sbjct 1872 ATATCTTCATAGGAT-TCCGGTCCTATTGTGTTGGCCTTCGGGATCGGA-GTAATGATTA 1929
Query 133 ATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGATTTAT 190
||| ||| ||||||||| | ||||| || |||| |||||||||||||||||||||
Sbjct 1930 ATAGGGACAGTCGGGGGCATTCGTATTTCATAGTCAGAGGTGAAATTCTTGGATTTAT 1987
>seq150423
Length=5051
Score = 122 bits (134), Expect = 9e-26
Identities = 136/178 (76%), Gaps = 3/178 (2%)
Strand=Plus/Minus
Query 14 TTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTC-GAATACATTACCATGGA 72
|||||||||| ||||||||| | ||| |||| ||| | |||| | |||||||| |||||
Sbjct 2240 TTACTTTGAAGAAATTAGAGTGCTCACAGCAAGCCATCGCTCTGGATACATTAGCATGGG 2181
Query 73 ATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGATAA 132
|||| | |||||| | ||| ||||| ||| || | ||| || |||||||| |
Sbjct 2180 ATAACATCATAGGAT-TCTGGTCCTATTATGTTGGCCTTCGGGATCGGA-GTAATGATTA 2123
Query 133 ATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGATTTAT 190
||| ||| ||||||||| | ||||| || || | |||||||||||||||||||||
Sbjct 2122 ATAGGGACAGTCGGGGGCATTCGTATTTCATAGTTAGAGGTGAAATTCTTGGATTTAT 2065
>seq456811
Length=9609
Score = 120 bits (132), Expect = 3e-25
Identities = 137/179 (77%), Gaps = 5/179 (3%)
Strand=Plus/Minus
Query 14 TTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGA-ATACATTACCATGGA 72
|||||||||| ||||||||| | |||||||| ||| | |||| | |||||||| ||| |
Sbjct 2678 TTACTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCATCGCTCTAGATACATTAGCATTGG 2619
Query 73 ATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGT-TTCTAGGACCGCCCGTAATGATA 131
|||| | |||||| | |||| ||||| ||| || ||| | ||| ||||||||
Sbjct 2618 ATAACATCATAGGAT-TCCGGTCCTATTGTGTTGGCCTTCGGGTTCCGA--GTAATGATT 2562
Query 132 AATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGATTTAT 190
|||| ||| |||| |||| | |||| || |||| |||||||||||||||||||||
Sbjct 2561 AATAGGGACAGTCAGGGGCATTCATATTTCATAGTCAGAGGTGAAATTCTTGGATTTAT 2503
>seq523016
Length=36230
Score = 116 bits (128), Expect = 4e-24
Identities = 135/178 (76%), Gaps = 3/178 (2%)
Strand=Plus/Plus
Query 14 TTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTC-GAATACATTACCATGGA 72
||||| |||| ||||||| | | |||||||| ||| | |||| | |||||||| |||||
Sbjct 32964 TTACTGTGAAGAAATTAGTGTGCTCAAAGCAAGCCATCGCTCTGGATACATTAGCATGGG 33023
Query 73 ATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGATAA 132
|||| | ||||| | |||| ||||| | | || | ||| || |||||||| |
Sbjct 33024 ATAACATCATAGGGT-TCCGGTCCTATTGTATTGGCCTTCGGGATCGGA-GTAATGATTA 33081
Query 133 ATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGATTTAT 190
||| ||| ||||||||| | ||||| || |||| |||||||||||||||||||||
Sbjct 33082 ATATGGACAGTCGGGGGCATTCGTATTTCATAGTCAGAGGTGAAATTCTTGGATTTAT 33139
>seq342117
Length=16184
Score = 116 bits (128), Expect = 4e-24
Identities = 135/178 (76%), Gaps = 3/178 (2%)
Strand=Plus/Plus
Query 14 TTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTC-GAATACATTACCATGGA 72
|||||||||| |||||||| | |||||||| ||| | ||| | |||||||| |||||
Sbjct 6083 TTACTTTGAAGAAATTAGACTGCTCAAAGCAAGCCATCACTCTGGATACATTAGCATGGG 6142
Query 73 ATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGATAA 132
|||| | |||||| | |||| ||||| | | || | ||| || |||||||| |
Sbjct 6143 ATAACATCATAGGAT-TCCGGTCCTATTGTTTTGGCCTTCGGGATCGGA-GTAATGATTA 6200
Query 133 ATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGATTTAT 190
||| ||| ||||||||| | ||||| || |||| ||| |||||||||||||||||
Sbjct 6201 ATAGGGACAGTCGGGGGGATTCGTATTTCATAGTCAGAGGAGAAATTCTTGGATTTAT 6258
>seq256932
Length=11616
Score = 116 bits (128), Expect = 4e-24
Identities = 135/178 (76%), Gaps = 3/178 (2%)
Strand=Plus/Plus
Query 14 TTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTC-GAATACATTACCATGGA 72
|||||||||| |||||| || | |||||| | ||| | |||| | |||||||| ||||
Sbjct 6184 TTACTTTGAAGAAATTATAGTGCTCAAAGAAAGCCATCGCTCTGGATACATTAGCATGTG 6243
Query 73 ATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGATAA 132
|||| | |||||| | |||| ||||| ||| || | | ||| || |||||||| |
Sbjct 6244 ATAACATCATAGGAT-TCCGGTCCTATTGTGTTGGCCTTTTGGATCGGA-GTAATGATTA 6301
Query 133 ATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGATTTAT 190
||| ||| | || |||| | ||||| || |||| |||||||||||||||||||||
Sbjct 6302 ATAGGGACAATCAGGGGCATTCGTATTTCATAGTCAGAGGTGAAATTCTTGGATTTAT 6359
>seq186638
Length=10844
Score = 116 bits (128), Expect = 4e-24
Identities = 135/178 (76%), Gaps = 3/178 (2%)
Strand=Plus/Minus
Query 14 TTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTC-GAATACATTACCATGGA 72
|||| ||||| ||||||||| | |||||||| || | |||| | |||||||| ||||
Sbjct 5921 TTACATTGAAGAAATTAGAGTGCTCAAAGCAATCCATCGCTCTGGATACATTAGAATGGG 5862
Query 73 ATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGATAA 132
|||| | |||||| | |||| ||||| ||| || | ||| || |||||||| |
Sbjct 5861 ATAACATCATAGGATTT-CGGTCCTATTGTGTTGGCCTTCGGGATCGGA-GTAATGATTA 5804
Query 133 ATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGATTTAT 190
||| ||||||| ||||| | ||||| || |||| |||||||||||| ||||||||
Sbjct 5803 ATAGGGATAGTTGGGGGCATTCGTATTTCATAGTCAGAGGTGAAATTCTGGGATTTAT 5746
>seq491185
Length=6566
Score = 113 bits (124), Expect = 5e-23
Identities = 134/178 (75%), Gaps = 3/178 (2%)
Strand=Plus/Plus
Query 14 TTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGA-ATACATTACCATGGA 72
|||||||||| ||||||||| | |||||||| ||| | |||| | ||||||||||||
Sbjct 4892 TTACTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCATCGCTCTCGACACATTACCATGGG 4951
Query 73 ATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGATAA 132
|||| | |||||| | |||| ||||| ||| || | ||| || ||| || |
Sbjct 4952 ATAACATCATAGGAT-TCCGGTCCTATTGTGTTGGCCTTCGGGATCGGAA-TAACAATTA 5009
Query 133 ATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGATTTAT 190
||| ||| ||| ||||| | ||||| || |||| |||||||||||||||||||||
Sbjct 5010 ATAGGGACAGTTGGGGGCATTCGTATTTCATAGTCAGAGGTGAAATTCTTGGATTTAT 5067
>seq152511
Length=2240
Score = 113 bits (124), Expect = 5e-23
Identities = 136/181 (75%), Gaps = 3/181 (2%)
Strand=Plus/Plus
Query 11 CTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTC-GAATACATTACCAT 69
|| |||||||||| ||||||||| | |||||||| | | || | |||||||| |||
Sbjct 879 CTATTACTTTGAAGAAATTAGAGTGCTCAAAGCAAAACATCACTTTGGATACATTAGCAT 938
Query 70 GGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGA 129
|| |||| | |||||| | ||| ||||| ||| || | ||| || |||||||
Sbjct 939 GGGATAACATCATAGGAT-TCTGGTCCTATTGTGTTGGCCTTCGGGATCGGA-GTAATGA 996
Query 130 TAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGATTTA 189
| |||| ||| ||||||||| | ||||| || |||| ||||||||||||||||||||
Sbjct 997 TTAATAGGGACAGTCGGGGGCATTCGTATTTCATAGTCAGAGGTGAAATTCTTGGATTTA 1056
Query 190 T 190
|
Sbjct 1057 T 1057
>seq298065
Length=1321
Score = 104 bits (114), Expect = 2e-20
Identities = 128/171 (75%), Gaps = 3/171 (2%)
Strand=Plus/Minus
Query 14 TTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTC-GAATACATTACCATGGA 72
|||||||||| ||||||||| | |||||||| ||| | |||| | |||||||| |||||
Sbjct 169 TTACTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCATCGCTCTGGATACATTAGCATGGG 110
Query 73 ATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGATAA 132
|||| | |||||| | ||| ||| | ||| || | ||| | |||||||| |
Sbjct 109 ATAACATCATAGGAT-TCTGGTCCTACTGTGTTGGCCTTCGGGATCAGA-GTAATGATTA 52
Query 133 ATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTG 183
||| ||| ||||| ||| | ||||| || |||| ||||||||||||||
Sbjct 51 ATAGGGACAGTCGAGGGCATTCGTATTTCATAGTCAGAGGTGAAATTCTTG 1
>seq263020
Length=843
Score = 104 bits (114), Expect = 2e-20
Identities = 68/75 (91%), Gaps = 0/75 (0%)
Strand=Plus/Minus
Query 1 GGAACCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGAATA 60
|||| |||||||||||||||||||||||||||| | || | |||||||| ||||||||||
Sbjct 75 GGAAGCAGGACTTTTACTTTGAAAAAATTAGAGTGCTCCAGGCAGGCCTATGCTCGAATA 16
Query 61 CATTACCATGGAATA 75
||||| |||||||||
Sbjct 15 CATTAGCATGGAATA 1
>seq188437
Length=853
Score = 102 bits (112), Expect = 8e-20
Identities = 118/155 (76%), Gaps = 3/155 (2%)
Strand=Plus/Plus
Query 37 TCAAAGCAGGCCTTTGCTC-GAATACATTACCATGGAATAATAGAATAGGACGTGCGGTT 95
|||||||| ||| | |||| | |||||||| ||||| |||| | |||||| | ||||
Sbjct 453 TCAAAGCAAGCCATCGCTCTGGATACATTAGCATGGGATAACATCATAGGAT-TCCGGTC 511
Query 96 CTATTTTGTAGGTTTCTAGGACCGCCCGTAATGATAAATACGGATAGTCGGGGGTGTCAG 155
|||| ||| || | | ||| || |||||||| |||| ||| ||||||||| |
Sbjct 512 ATATTGTGTTGGCCTTTGGGATCGAA-GTAATGATTAATAGGGACAGTCGGGGGCATTCA 570
Query 156 TATTCAATTGTCAAAGGTGAAATTCTTGGATTTAT 190
|||| || |||| |||||||||||||||||||||
Sbjct 571 TATTTCATAGTCAGAGGTGAAATTCTTGGATTTAT 605
>seq131970
Length=1734
Score = 102 bits (112), Expect = 8e-20
Identities = 133/179 (74%), Gaps = 5/179 (3%)
Strand=Plus/Plus
Query 14 TTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTC-GAATACATTACCATGGA 72
|||||||||| ||||||||| | | |||||| | | |||| | |||||||| |||||
Sbjct 1003 TTACTTTGAAGAAATTAGAGTGCTTAAAGCAAAACATCGCTCTGGATACATTAGCATGGG 1062
Query 73 ATAATAGAATAGGACGTGCGGTTC-TATTTTGTAGGTTTCTAGGACCGCCCGTAATGATA 131
|||| | |||||| | | |||| |||| || | ||| || ||||||||
Sbjct 1063 ATAACATCATAGGA--TTCTGTTCCTATTGGCGGGGCCTTCGGGATCGGA-GTAATGATT 1119
Query 132 AATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGATTTAT 190
|||| ||| ||||||||| | ||||| || |||| |||||||||||||||||||||
Sbjct 1120 AATAGGGACAGTCGGGGGCATTCGTATTTCATAGTCAGAGGTGAAATTCTTGGATTTAT 1178
>seq491352
Length=12198
Score = 100 bits (110), Expect = 3e-19
Identities = 124/166 (75%), Gaps = 3/166 (2%)
Strand=Plus/Minus
Query 26 AATTAGAGCGTTCAAAGCAGGCCTTTGCTC-GAATACATTACCATGGAATAATAGAATAG 84
|||||||| | |||||||| || | ||| | ||||| || ||||| | || | ||||
Sbjct 5197 AATTAGAGTGCTCAAAGCAAGCTATCGCTTTGGATACAATAGCATGGGACAACATCATAG 5138
Query 85 GACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGATAAATACGGATAGTC 144
|| | |||| ||||| |||||| | ||| || |||||||| |||| ||| || |
Sbjct 5137 GAT-TCCGGTCCTATTGTGTAGGCCTTCGGGATCGGA-GTAATGATTAATAGGGACAGCC 5080
Query 145 GGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGATTTAT 190
||||| | ||||| || |||| |||||||||||||||||||||
Sbjct 5079 GGGGGCATTCGTATTTCATAGTCAGAGGTGAAATTCTTGGATTTAT 5034
>seq416877
Length=247
Score = 96.9 bits (106), Expect = 4e-18
Identities = 78/93 (84%), Gaps = 1/93 (1%)
Strand=Plus/Plus
Query 98 ATTTTGTAGGTTTCTAGGACCGCCCGTAATGATAAATACGGATAGTCGGGGGTGTCAGTA 157
||||||| ||||||||||| |||| |||||||| |||| ||| |||||||| | ||||
Sbjct 1 ATTTTGTTGGTTTCTAGGATCGCC-GTAATGATTAATAGGGACGGTCGGGGGCATTAGTA 59
Query 158 TTCAATTGTCAAAGGTGAAATTCTTGGATTTAT 190
||| |||| | ||||||||||||| |||||||
Sbjct 60 TTCCATTGCTAGAGGTGAAATTCTTAGATTTAT 92
>seq15692
Length=234
Score = 96.9 bits (106), Expect = 4e-18
Identities = 64/71 (90%), Gaps = 0/71 (0%)
Strand=Plus/Minus
Query 3 AACCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGAATACA 62
||| ||||| ||||||||||||||||||||| ||| |||||||||||| ||| |||||||
Sbjct 71 AACTAGGACGTTTACTTTGAAAAAATTAGAGTGTTTAAAGCAGGCCTTCGCTTGAATACA 12
Query 63 TTACCATGGAA 73
||| |||||||
Sbjct 11 TTAGCATGGAA 1
>seq188736
Length=346
Score = 89.7 bits (98), Expect = 5e-16
Identities = 127/174 (73%), Gaps = 5/174 (3%)
Strand=Plus/Minus
Query 14 TTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTC-GAATACATTACCATGGA 72
|||||||||| | ||||||| | |||||||| || | |||| | |||||||| |||||
Sbjct 171 TTACTTTGAAGATATTAGAGTGCTCAAAGCAAGCTATCGCTCTGGATACATTAGCATGGG 112
Query 73 ATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGT-TTCTAGGACCGCCCGTAATGATA 131
|||| | ||||| | ||| ||||| ||| | ||| || | | | ||||||
Sbjct 111 ATAACATCGTAGGAT-TCTGGTCCTATTGTGTTGACCTTCGAGATCAGAGC--AATGATT 55
Query 132 AATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGA 185
|||| | | ||||||||| | |||| || |||| ||||||||||||||||
Sbjct 54 AATAGGAACAGTCGGGGGCATTCATATTTCATAGTCAGAGGTGAAATTCTTGGA 1
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 509392890080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |