Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eleusine_20coracana_20subsp._20coracana_20[genbank_20GCA_5F002180455 .1_202017-06-08] 525,627 sequences; 1,195,986,209 total letters Query= AAMG01001989.1 Length=469 Score E Sequences producing significant alignments: (Bits) Value seq426090 77.0 9e-12 seq203558 77.0 9e-12 >seq426090 Length=1297 Score = 77.0 bits (84), Expect = 9e-12 Identities = 93/126 (74%), Gaps = 3/126 (2%) Strand=Plus/Plus Query 236 AATGGCGCCAACCCGCAAACCCACCGCGACACCACCGCACCCGAGATCCTGCGCGCTTTT 295 |||| ||||||||| | ||||||| | |||||||| ||||||||||||| Sbjct 698 AATGAGGCCAACCCGGCCATCCACCGCAAGACCACCGCCGAAGAGATCCTGCGCGACACC 757 Query 296 GGTGAGCGGCGCGTGGACTACTTCGTCAGCGGCATCGGCACCGGTGGCCACATCACCGGC 355 | || | || |||||||||||| |||||||||||| || ||| |||||||||| Sbjct 758 G---AGGGCAAGGTCGACTACTTCGTCGCCGGCATCGGCACGGGCGGCACCATCACCGGC 814 Query 356 ATCGGC 361 ||||| Sbjct 815 GTCGGC 820 >seq203558 Length=240 Score = 77.0 bits (84), Expect = 9e-12 Identities = 81/107 (76%), Gaps = 0/107 (0%) Strand=Plus/Plus Query 267 CCACCGCACCCGAGATCCTGCGCGCTTTTGGTGAGCGGCGCGTGGACTACTTCGTCAGCG 326 ||||||| || || |||||||||| || | | |||| |||||| ||||||||||| Sbjct 1 CCACCGCTCCGGAAATCCTGCGCGACTTCGCCGGCAAGCGCCTGGACTTCTTCGTCAGCG 60 Query 327 GCATCGGCACCGGTGGCCACATCACCGGCATCGGCGAAACCCTCAAG 373 || |||||||| ||| | |||||||| | |||||| ||| ||| Sbjct 61 GCTGGGGCACCGGCGGCACCCTCACCGGCGTGGGCGAAGTCCTGAAG 107 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1391049632032