Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eleusine_20coracana_20subsp._20coracana_20[genbank_20GCA_5F002180455 .1_202017-06-08] 525,627 sequences; 1,195,986,209 total letters Query= AAMG01001997.1 Length=304 Score E Sequences producing significant alignments: (Bits) Value seq344600 113 8e-23 seq401110 80.6 5e-13 >seq344600 Length=988 Score = 113 bits (124), Expect = 8e-23 Identities = 116/152 (76%), Gaps = 0/152 (0%) Strand=Plus/Minus Query 153 AGAGCATCAGCCGCACGACCGACTCACTCGGATCGCGGGTTTTACCAGCGGCTTTGAGCT 212 |||||||||| || ||||||||||| |||| ||||||| || || || || || Sbjct 836 AGAGCATCAGGCGTACGACCGACTCGTTCGGGTCGCGGGATTGGCCGGCAGCGGCCAGGG 777 Query 213 CGGCCAGGTAGTCGGCCCACAAAGCGTCCTGACGTACGGCCAACTGATAGAGGTAGTCCC 272 | |||||||||| ||||| ||||||| || | ||||| || | |||||||||| Sbjct 776 CATCCAGGTAGTCACGCCACAGTTCGTCCTGGCGCAGGGCCAGTTGGTGCAGGTAGTCCC 717 Query 273 AGGTGAACAGTCCGCTGTCATGACCGTCGTCG 304 || ||||||| ||||||||||| ||||| ||| Sbjct 716 AGCTGAACAGCCCGCTGTCATGGCCGTCATCG 685 >seq401110 Length=2462 Score = 80.6 bits (88), Expect = 5e-13 Identities = 71/89 (80%), Gaps = 0/89 (0%) Strand=Plus/Plus Query 216 CCAGGTAGTCGGCCCACAAAGCGTCCTGACGTACGGCCAACTGATAGAGGTAGTCCCAGG 275 |||||||||||||||| | ||||| | || | ||| | |||||| ||||||||| Sbjct 2163 CCAGGTAGTCGGCCCAGAGCGCGTCGCGGCGACTGCCCAGTTCATAGAGATAGTCCCAGC 2222 Query 276 TGAACAGTCCGCTGTCATGACCGTCGTCG 304 ||||||| |||||||| || ||||||||| Sbjct 2223 TGAACAGGCCGCTGTCGTGGCCGTCGTCG 2251 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 865824942592