Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eleusine_20coracana_20subsp._20coracana_20[genbank_20GCA_5F002180455 .1_202017-06-08] 525,627 sequences; 1,195,986,209 total letters Query= AAMG01002120.1 Length=347 Score E Sequences producing significant alignments: (Bits) Value seq133636 322 1e-85 >seq133636 Length=503 Score = 322 bits (356), Expect = 1e-85 Identities = 249/296 (84%), Gaps = 0/296 (0%) Strand=Plus/Plus Query 50 TCACCGTGGTTGCCCTCGGCGTTGTTCAGGCCGAACAGGCGCTCCTTGATGATTCCATCG 109 || || |||||||||||||||||| ||||||||||||| |||||||||| || ||| Sbjct 23 TCGCCATGGTTGCCCTCGGCGTTGGTCAGGCCGAACAGCCGCTCCTTGAGGAAGGGGTCG 82 Query 110 CGCTCGTTCCACAGGGCCAGGCCCAGGCACCAACGTTGCGCCTTGTCACTGAACCCCGCC 169 ||||||||||| ||||| | |||||||||||| | || |||||||| | ||| || ||| Sbjct 83 CGCTCGTTCCAGAGGGCGATGCCCAGGCACCATTGCTGGGCCTTGTCGCAGAAACCGGCC 142 Query 170 AGGCCGTCCTCGCCCCAACGGTAGGCGCGGCTGCGTGCATGGTCATGGGGGAAGTAGGCC 229 |||||||| |||||||| || |||||||||||||| |||||||||||||| |||||| | Sbjct 143 AGGCCGTCTTCGCCCCAGCGATAGGCGCGGCTGCGCGCATGGTCATGGGGAAAGTAGCGC 202 Query 230 CAGGCGTCGCCATCGGCGCTGTAGTCTTCGCGCACCGTGCCCCATTGGCGTTCGCTCAGG 289 ||||||||||| ||||||||||||||||| || |||||| |||| ||||| ||||||||| Sbjct 203 CAGGCGTCGCCGTCGGCGCTGTAGTCTTCACGGACCGTGGCCCACTGGCGCTCGCTCAGG 262 Query 290 TAGGGGCCCCACTCGCGCCAGCGCTCGGCGTCGCTGGTTGCCAGGCGTTGGCCTTC 345 ||||| ||||||| |||||| |||||||| | |||||||| |||||||| Sbjct 263 TAGGGTCCCCACTGTCGCCAGGCGGCGGCGTCGGTATCAGCCAGGCGCTGGCCTTC 318 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1002701679840