Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Eleusine_20coracana_20subsp._20coracana_20[genbank_20GCA_5F002180455
.1_202017-06-08] 525,627 sequences; 1,195,986,209 total letters
Query= AAMG01002223.1
Length=366
Score E
Sequences producing significant alignments: (Bits) Value
seq361842 327 2e-87
seq265621 304 3e-80
seq353491 284 3e-74
seq266671 246 6e-63
seq102997 244 2e-62
seq488541 219 9e-55
seq472377 187 5e-45
seq142100 158 3e-36
seq384718 152 1e-34
seq35649 152 1e-34
seq453768 149 1e-33
seq283931 147 5e-33
seq50800 141 2e-31
seq101571 132 1e-28
seq40001 120 6e-25
seq473580 114 3e-23
seq323032 113 1e-22
seq86598 109 1e-21
seq316935 105 1e-20
seq125478 104 5e-20
seq321222 95.1 3e-17
seq120832 89.7 1e-15
seq183381 87.8 4e-15
seq162720 86.0 1e-14
>seq361842
Length=689
Score = 327 bits (362), Expect = 2e-87
Identities = 292/366 (80%), Gaps = 0/366 (0%)
Strand=Plus/Plus
Query 1 GGCTGCTGGCACGGAGTTAGCCGATGCTTATTCATAAGGTACATACAAGCTCCCACACGT 60
||||||||||||||||||||||||| ||||||| || |||||| || || |||||||
Sbjct 275 GGCTGCTGGCACGGAGTTAGCCGATCCTTATTCTTACCGTACATTCAGCTTCTCACACGT 334
Query 61 GGAAGGTTTTATTCCCTTATAAAAGAAGTTTACAATCCGTAGAACCTTCATCCTTCACGC 120
| || | |||||||| || ||||| ||||||||| |||||| || || |||| |||||
Sbjct 335 GAAAAGGTTTATTCCGGTACAAAAGCAGTTTACAACCCGTAGGGCCGTCTTCCTGCACGC 394
Query 121 TACTTGGCTGGTTCAGACTCTCGTCCATTGACCAATATTCCTCACTGCTGCCTCCCGTAG 180
| ||||||||||||||| ||||||||||||||||||||| |||||||||||||||||
Sbjct 395 GGCATGGCTGGTTCAGACTTGCGTCCATTGACCAATATTCCTTACTGCTGCCTCCCGTAG 454
Query 181 GAGTTTGGACCGTGTCTCAGTTCCAATGTGGGGGACCTTCCTCTCAGAACCCCTATCCAT 240
|||| ||| |||||||||||| ||| |||||||| | |||||||||| |||||| |||
Sbjct 455 GAGTCTGGTCCGTGTCTCAGTACCAGTGTGGGGGGTCATCCTCTCAGATCCCCTAAACAT 514
Query 241 CGTAGGCTAGGTGGGCCGTTACCCCGCCTACTACCTAATGGAACGCATCCCCATCGTACA 300
||||| || ||| ||||||||| | || |||| |||||| ||||| |||||| ||
Sbjct 515 CGTAGCCTTGGTATGCCGTTACCACACCAACTAGCTAATGTTCCGCATGCCCATCTTAAT 574
Query 301 CCGATGAATCTTTAATGATGATACCATGCAATCTCATCATACCATCAGGTATTAATCTTT 360
|| || ||| ||| || || | | |||| || || || || ||| ||||||| |
Sbjct 575 CCTATAAATATTTGATTATTAAATAATGCTATTCAATAATGTTATGCGGTGTTAATCTCT 634
Query 361 CTTTCG 366
||||||
Sbjct 635 CTTTCG 640
>seq265621
Length=2901
Score = 304 bits (336), Expect = 3e-80
Identities = 261/320 (82%), Gaps = 2/320 (1%)
Strand=Plus/Plus
Query 1 GGCTGCTGGCACGGAGTTAGCCGATGCTTATTCATAAGGTACATACAAGCT-CCCACACG 59
||||||||||||||||||||||||| ||||||| | ||||||| | |||| |||||
Sbjct 1834 GGCTGCTGGCACGGAGTTAGCCGATCCTTATTCCTTCGGTACATTC-AGCTATTTACACG 1892
Query 60 TGGAAGGTTTTATTCCCTTATAAAAGAAGTTTACAATCCGTAGAACCTTCATCCTTCACG 119
| | | ||||||||| ||||||| ||||||||| || || || || |||| ||||
Sbjct 1893 TAAATAGGTTTATTCCCGAATAAAAGCAGTTTACAACCCAGAGGGCCGTCTTCCTGCACG 1952
Query 120 CTACTTGGCTGGTTCAGACTCTCGTCCATTGACCAATATTCCTCACTGCTGCCTCCCGTA 179
| | ||||||||||||| | | ||||||||||||||||||| ||||||||||||||||
Sbjct 1953 CGGCATGGCTGGTTCAGAGTTCCCTCCATTGACCAATATTCCTTACTGCTGCCTCCCGTA 2012
Query 180 GGAGTTTGGACCGTGTCTCAGTTCCAATGTGGGGGACCTTCCTCTCAGAACCCCTATCCA 239
||||| ||| |||||||||||| ||| |||||||| || |||||||||| |||||| ||
Sbjct 2013 GGAGTCTGGTCCGTGTCTCAGTACCAGTGTGGGGGGCCATCCTCTCAGATCCCCTAGTCA 2072
Query 240 TCGTAGGCTAGGTGGGCCGTTACCCCGCCTACTACCTAATGGAACGCATCCCCATCGTAC 299
|||| | || ||||||||||||||||||| |||| |||||| |||||| |||||| ||
Sbjct 2073 TCGTCGCCTTGGTGGGCCGTTACCCCGCCAACTAGCTAATGACACGCATGCCCATCTTAT 2132
Query 300 ACCGATGAATCTTTAATGAT 319
|| || ||| ||| || ||
Sbjct 2133 TCCTATAAATATTTGATCAT 2152
>seq353491
Length=550
Score = 284 bits (314), Expect = 3e-74
Identities = 240/295 (81%), Gaps = 0/295 (0%)
Strand=Plus/Minus
Query 1 GGCTGCTGGCACGGAGTTAGCCGATGCTTATTCATAAGGTACATACAAGCTCCCACACGT 60
||||||||||||||||||||||||| ||||||| || ||||||| || ||| | || |
Sbjct 377 GGCTGCTGGCACGGAGTTAGCCGATCCTTATTCTTACGGTACATTCAGCTTCCTATACAT 318
Query 61 GGAAGGTTTTATTCCCTTATAAAAGAAGTTTACAATCCGTAGAACCTTCATCCTTCACGC 120
||| | |||||||| || ||||| ||||||||| || ||| | ||||||| |||||
Sbjct 317 AGAAAGGGTTATTCCCGTACAAAAGCAGTTTACAACCCATAGGGCAGTCATCCTGCACGC 258
Query 121 TACTTGGCTGGTTCAGACTCTCGTCCATTGACCAATATTCCTCACTGCTGCCTCCCGTAG 180
| |||||||||||| || || |||||||||||||||||| |||||||||||||||||
Sbjct 257 GGCATGGCTGGTTCAGGCTTGCGCCCATTGACCAATATTCCTTACTGCTGCCTCCCGTAG 198
Query 181 GAGTTTGGACCGTGTCTCAGTTCCAATGTGGGGGACCTTCCTCTCAGAACCCCTATCCAT 240
|||| ||| |||||||||||| ||| ||||||||| |||||||||| |||||| |||
Sbjct 197 GAGTCTGGTCCGTGTCTCAGTACCAGTGTGGGGGATTCTCCTCTCAGAGCCCCTAGACAT 138
Query 241 CGTAGGCTAGGTGGGCCGTTACCCCGCCTACTACCTAATGGAACGCATCCCCATC 295
||| | || ||| ||||||||||| || |||| |||||| |||| ||||||
Sbjct 137 CGTTGCCTTGGTAGGCCGTTACCCTACCAACTAGCTAATGTCACGCGAGCCCATC 83
Score = 93.3 bits (102), Expect = 9e-17
Identities = 84/103 (82%), Gaps = 2/103 (2%)
Strand=Plus/Minus
Query 1 GGCTGCTGGCACGGAGTTAGCCGATGCTTATTCATAAGGTACATACAAGCT-CCCACACG 59
||||||||||||||||||||||||| ||||||| | |||||||| | |||| | | ||
Sbjct 523 GGCTGCTGGCACGGAGTTAGCCGATCCTTATTCTTCAGGTACATTC-AGCTATCTATACA 465
Query 60 TGGAAGGTTTTATTCCCTTATAAAAGAAGTTTACAATCCGTAG 102
| || | |||||||||| | ||||| ||||||||| || |||
Sbjct 464 TAGATAGGTTTATTCCCTGACAAAAGCAGTTTACAACCCATAG 422
>seq266671
Length=1116
Score = 246 bits (272), Expect = 6e-63
Identities = 224/280 (80%), Gaps = 2/280 (1%)
Strand=Plus/Plus
Query 1 GGCTGCTGGCACGGAGTTAGCCGATGCTTATTCATAAGGTACATACAAGCT-CCCACACG 59
||||||||||||||||||||||| ||||||||| || |||| | | |||| ||| ||||
Sbjct 331 GGCTGCTGGCACGGAGTTAGCCGGTGCTTATTCGTACAGTACCTTC-AGCTACCCTCACG 389
Query 60 TGGAAGGTTTTATTCCCTTATAAAAGAAGTTTACAATCCGTAGAACCTTCATCCTTCACG 119
|| | ||||| || || ||||||||||||||| || ||| || || |||||||||
Sbjct 390 AGGGTAGGTTTATCCCTGTACAAAAGAAGTTTACAACCCATAGGGCCGTCGTCCTTCACG 449
Query 120 CTACTTGGCTGGTTCAGACTCTCGTCCATTGACCAATATTCCTCACTGCTGCCTCCCGTA 179
| ||||||| |||| | || |||||| ||||||||||||||||||||||||||||
Sbjct 450 CGGGATGGCTGGATCAGGCGCTAACCCATTGTCCAATATTCCTCACTGCTGCCTCCCGTA 509
Query 180 GGAGTTTGGACCGTGTCTCAGTTCCAATGTGGGGGACCTTCCTCTCAGAACCCCTATCCA 239
||||| ||| |||||||||||| ||| ||||||||| | |||||||| |||||| |
Sbjct 510 GGAGTCTGGTCCGTGTCTCAGTACCAGTGTGGGGGATCACCCTCTCAGGCCCCCTAAAGA 569
Query 240 TCGTAGGCTAGGTGGGCCGTTACCCCGCCTACTACCTAAT 279
|| | | || |||| ||||||||| | || |||| |||||
Sbjct 570 TCATCGACTTGGTGAGCCGTTACCTCACCAACTATCTAAT 609
Score = 156 bits (172), Expect = 9e-36
Identities = 172/225 (76%), Gaps = 7/225 (3%)
Strand=Plus/Plus
Query 145 CCATTGACCAATATTCCTCACTGCTGCCTCCCGTAGGAGTTTGGACCGTGTCTCAGTTCC 204
|||||| ||||||||||||||||||||||||||||||||| ||| |||||||||||| ||
Sbjct 637 CCATTGTCCAATATTCCTCACTGCTGCCTCCCGTAGGAGTCTGGTCCGTGTCTCAGTACC 696
Query 205 AATGTGGGGGACCTTCCTCTCAGAACCCCTATCCATCGTAGGCTAGGTGGGCCGTTACCC 264
| ||||||||| | |||||||| |||||| ||| | | || |||| |||||||||
Sbjct 697 AGTGTGGGGGATCACCCTCTCAGGCCCCCTAAAGATCATCGACTTGGTGAGCCGTTACCT 756
Query 265 CGCCTACTACCTAATGGAACGCATCCCCATC---GTACACCGATGAATCTTTAATGATGA 321
| || |||| ||||| ||| | |||||| | ||||| || | || ||| || |
Sbjct 757 CACCAACTATCTAATCTTGCGCGTGCCCATCTCTATCCACCG--GAGTTTTCAAT-ATCA 813
Query 322 TACCATGCAATCTCATCATACCATCAGGTATTAATCTTTCTTTCG 366
| |||| | || | ||| || |||||||||||| ||||||
Sbjct 814 AATGATGCCA-CTTAATATATTATGGGGTATTAATCTTCCTTTCG 857
>seq102997
Length=950
Score = 244 bits (270), Expect = 2e-62
Identities = 245/316 (78%), Gaps = 4/316 (1%)
Strand=Plus/Plus
Query 1 GGCTGCTGGCACGGAGTTAGCCGATGCTTATTCATAAGGTACAT--ACAAGCTCCCACAC 58
||||||||||||||||||||||| ||||||||| | ||||| ||| | ||| ||
Sbjct 633 GGCTGCTGGCACGGAGTTAGCCGGTGCTTATTCCTCTGGTACCGTCACATGACCCCGCAG 692
Query 59 GTGGAAGGTTTTATTCCCTTATAAAAGAAGTTTACAATCCGTAGAACCTTCATCCTTCAC 118
| | |||| ||||| ||||||| ||||||||| | || |||||||||| |||
Sbjct 693 GACCAC--TTTTCTTCCCAGATAAAAGCAGTTTACAACGCTGAGCGCCTTCATCCTGCAC 750
Query 119 GCTACTTGGCTGGTTCAGACTCTCGTCCATTGACCAATATTCCTCACTGCTGCCTCCCGT 178
|| | ||||||| ||||| | | ||||||| |||||||||| |||||||||||||||
Sbjct 751 GCGGCATGGCTGGGTCAGAGTTGCCTCCATTGCCCAATATTCCCTACTGCTGCCTCCCGT 810
Query 179 AGGAGTTTGGACCGTGTCTCAGTTCCAATGTGGGGGACCTTCCTCTCAGAACCCCTATCC 238
||||||| || |||| ||||||| || ||||||||| | |||||||||||||||||
Sbjct 811 AGGAGTTGGGTCCGTATCTCAGTACCCATGTGGGGGCCAATCCTCTCAGAACCCCTACTG 870
Query 239 ATCGTAGGCTAGGTGGGCCGTTACCCCGCCTACTACCTAATGGAACGCATCCCCATCGTA 298
||| | | || ||| ||||||||||| ||| |||| ||||| ||||| ||| || |
Sbjct 871 ATCATCGCCTTGGTAGGCCGTTACCCTGCCAACTAGCTAATCAGACGCAAGCCCCTCCTC 930
Query 299 CACCGATGAATCTTTA 314
||| |||||| ||||
Sbjct 931 AACCCATGAATGTTTA 946
>seq488541
Length=418
Score = 219 bits (242), Expect = 9e-55
Identities = 177/214 (83%), Gaps = 0/214 (0%)
Strand=Plus/Plus
Query 1 GGCTGCTGGCACGGAGTTAGCCGATGCTTATTCATAAGGTACATACAAGCTCCCACACGT 60
||||||||||||||||||||||||| ||||||| || ||||||| || || | || |
Sbjct 12 GGCTGCTGGCACGGAGTTAGCCGATCCTTATTCTTACGGTACATTCAGCCTATTATACAT 71
Query 61 GGAAGGTTTTATTCCCTTATAAAAGAAGTTTACAATCCGTAGAACCTTCATCCTTCACGC 120
||| |||||||| || ||||| ||||||||| |||||| | ||||||| |||||
Sbjct 72 AATAGGGGTTATTCCCGTACAAAAGCAGTTTACAACCCGTAGGGCAGTCATCCTGCACGC 131
Query 121 TACTTGGCTGGTTCAGACTCTCGTCCATTGACCAATATTCCTCACTGCTGCCTCCCGTAG 180
| ||||||||||||| | | ||||||||||||||||||| |||||||||||||||||
Sbjct 132 GGCATGGCTGGTTCAGAGTTGCCTCCATTGACCAATATTCCTTACTGCTGCCTCCCGTAG 191
Query 181 GAGTTTGGACCGTGTCTCAGTTCCAATGTGGGGG 214
|||| ||| |||||||||||| ||| ||||||||
Sbjct 192 GAGTCTGGTCCGTGTCTCAGTACCAGTGTGGGGG 225
>seq472377
Length=231
Score = 187 bits (206), Expect = 5e-45
Identities = 166/205 (81%), Gaps = 2/205 (1%)
Strand=Plus/Minus
Query 1 GGCTGCTGGCACGGAGTTAGCCGATGCTTATTCATAAGGTACATACAAGCTCCC-ACACG 59
||||||||||||||||||||||||| ||||||| | |||| | || ||| | |||||
Sbjct 204 GGCTGCTGGCACGGAGTTAGCCGATCCTTATTCTTCGAGTACGTTCA-GCTATCTACACG 146
Query 60 TGGAAGGTTTTATTCCCTTATAAAAGAAGTTTACAATCCGTAGAACCTTCATCCTTCACG 119
| || | |||||||| | ||||| ||||||||| || ||| | || |||| ||||
Sbjct 145 TAGATAGGTTTATTCCTCGACAAAAGCAGTTTACAACCCATAGGGCAGTCGTCCTGCACG 86
Query 120 CTACTTGGCTGGTTCAGACTCTCGTCCATTGACCAATATTCCTCACTGCTGCCTCCCGTA 179
| | |||||||||||| || || |||||||||||||||||| ||||||||||||||||
Sbjct 85 CGGCATGGCTGGTTCAGGCTTCCGCCCATTGACCAATATTCCTTACTGCTGCCTCCCGTA 26
Query 180 GGAGTTTGGACCGTGTCTCAGTTCC 204
||||| ||| |||||||||||| ||
Sbjct 25 GGAGTCTGGTCCGTGTCTCAGTACC 1
>seq142100
Length=237
Score = 158 bits (174), Expect = 3e-36
Identities = 158/204 (77%), Gaps = 1/204 (0%)
Strand=Plus/Plus
Query 1 GGCTGCTGGCACGGAGTTAGCCGATGCTTATTCATAAGGTACATACAAGCTCCCACACGT 60
||||||||||||| ||||||||| ||||||||| |||||| ||| ||| | |
Sbjct 35 GGCTGCTGGCACGTAGTTAGCCGGTGCTTATTCGATAGGTACCGTCAACTGGTCACGCAT 94
Query 61 GGAAGGTTTTATTCCCTTATAAAAGAAGTTTACAATCCGTAGAACCTTCATCCTTCACGC 120
| | ||| |||||| ||||| ||||||||| || || ||||| |||| |||||
Sbjct 95 G-ACCTCTTTCTTCCCTATCAAAAGCAGTTTACAACCCAGAGGGCCTTCTTCCTGCACGC 153
Query 121 TACTTGGCTGGTTCAGACTCTCGTCCATTGACCAATATTCCTCACTGCTGCCTCCCGTAG 180
| ||||||| ||||| | || ||||||| |||||||||| |||||||||||||||||
Sbjct 154 GGCATGGCTGGGTCAGAGTTTCCTCCATTGCCCAATATTCCCTACTGCTGCCTCCCGTAG 213
Query 181 GAGTTTGGACCGTGTCTCAGTTCC 204
|||| ||| |||| ||||||| ||
Sbjct 214 GAGTCTGGCCCGTATCTCAGTGCC 237
>seq384718
Length=777
Score = 152 bits (168), Expect = 1e-34
Identities = 207/288 (72%), Gaps = 13/288 (5%)
Strand=Plus/Plus
Query 1 GGCTGCTGGCACGGAGTTAGCCGATGCTTATTCATAAGGTACATACAAGCTCCCA----- 55
||||||||||||| ||||||||| ||||||||| |||||| || | ||
Sbjct 8 GGCTGCTGGCACGTAGTTAGCCGGTGCTTATTCTGCAGGTACCGTCATCTGCGCATGGTA 67
Query 56 ----CACGTGGAAGGTTTTATTCCCTTATAAAAGAAGTTTACAATCCGTAGAACCTTCAT 111
|||| | | ||| || ||| ||||| ||||||| ||| || |||||||
Sbjct 68 TTAACACGCGCCA---TTTCTTTCCTGCCAAAAGTGCTTTACAACCCGAAGG-CCTTCAT 123
Query 112 CCTTCACGCTACTTGGCTGGTTCAGACTCTCGTCCATTGACCAATATTCCTCACTGCTGC 171
| ||||| ||||||| |||| | || |||||| |||| ||||| |||||||||
Sbjct 124 CGCACACGCGGGATGGCTGGATCAGGGTTTCCCCCATTGTCCAAAATTCCCCACTGCTGC 183
Query 172 CTCCCGTAGGAGTTTGGACCGTGTCTCAGTTCCAATGTGGGGGACCTTCCTCTCAGAACC 231
||||||||||||| ||| |||||||||||| ||| ||||| | | |||||||| | |
Sbjct 184 CTCCCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCTGGTCGTCCTCTCAAACCA 243
Query 232 CCTATCCATCGTAGGCTAGGTGGGCCGTTACCCCGCCTACTACCTAAT 279
||| ||||| | || |||| ||| ||||| | || |||| |||||
Sbjct 244 GCTACGGATCGTCGCCTTGGTGAGCCATTACCTCACCAACTAGCTAAT 291
>seq35649
Length=525
Score = 152 bits (168), Expect = 1e-34
Identities = 133/163 (82%), Gaps = 2/163 (1%)
Strand=Plus/Plus
Query 1 GGCTGCTGGCACGGAGTTAGCCGATGCTTATTCATAAGGTACATACAAGCTCCC-ACACG 59
||||||||||||||||||||||||| ||||||| || ||||||| || |||| | | ||
Sbjct 364 GGCTGCTGGCACGGAGTTAGCCGATCCTTATTCTTACGGTACATTCA-GCTCTCTATACA 422
Query 60 TGGAAGGTTTTATTCCCTTATAAAAGAAGTTTACAATCCGTAGAACCTTCATCCTTCACG 119
| | | |||||||| |||||||| ||||||||| |||||| | ||||||| ||||
Sbjct 423 TAAAGAGGGTTATTCCCGTATAAAAGCAGTTTACAACCCGTAGGGCAGTCATCCTGCACG 482
Query 120 CTACTTGGCTGGTTCAGACTCTCGTCCATTGACCAATATTCCT 162
| | |||||||||||| || || ||||||||||||||||||
Sbjct 483 CGGCATGGCTGGTTCAGGCTTGCGCCCATTGACCAATATTCCT 525
>seq453768
Length=293
Score = 149 bits (164), Expect = 1e-33
Identities = 139/177 (79%), Gaps = 0/177 (0%)
Strand=Plus/Minus
Query 181 GAGTTTGGACCGTGTCTCAGTTCCAATGTGGGGGACCTTCCTCTCAGAACCCCTATCCAT 240
|||| ||| |||||||||||| ||| ||||||||| || |||||||| ||||||| ||||
Sbjct 293 GAGTCTGGTCCGTGTCTCAGTACCAGTGTGGGGGATCTCCCTCTCAGGACCCCTACCCAT 234
Query 241 CGTAGGCTAGGTGGGCCGTTACCCCGCCTACTACCTAATGGAACGCATCCCCATCGTACA 300
| | | || ||| ||||||||| || |||| ||||||| |||||| | |||| ||||
Sbjct 233 CATCGCCTTGGTATGCCGTTACCATACCAACTAGCTAATGGGACGCATGCTCATCTTACA 174
Query 301 CCGATGAATCTTTAATGATGATACCATGCAATCTCATCATACCATCAGGTATTAATC 357
||||| |||||||||| | || |||| | ||| |||| || ||||||||||
Sbjct 173 CCGATAAATCTTTAATATTAATGTGATGCCACATCAGTATACTATAGGGTATTAATC 117
>seq283931
Length=338
Score = 147 bits (162), Expect = 5e-33
Identities = 146/187 (78%), Gaps = 4/187 (2%)
Strand=Plus/Minus
Query 173 TCCCGTAGGAGTTTGGACCGTGTCTCAGTTCCAATGTGGGGGACCTTCCTCTCAGAACCC 232
|||||||||||| ||| |||||||||||| ||| |||||||| | |||||||||| |||
Sbjct 338 TCCCGTAGGAGTCTGGTCCGTGTCTCAGTACCAGTGTGGGGGGTCATCCTCTCAGATCCC 279
Query 233 CTATCCATCGTAGGCTAGGTGGGCCGTTACCCCGCCTACTACCTAATGGAACGCATCCCC 292
||| |||||| | || ||||||||||||||||||| |||| |||||| |||||| |||
Sbjct 278 CTAGTCATCGTCGCCTTGGTGGGCCGTTACCCCGCCAACTAGCTAATGACACGCATGCCC 219
Query 293 ATCGTACACCGATGAATCTTTAATGAT--GATACCATGCAATCTCATCATACCATCAGGT 350
||| | || || ||| ||| || || |||| |||| ||| | || || |||
Sbjct 218 ATCTTTATCCCATAAATGTTTGATCATTGGATA--ATGCCATCCTGTGATTTTATGCGGT 161
Query 351 ATTAATC 357
|||||||
Sbjct 160 ATTAATC 154
>seq50800
Length=353
Score = 141 bits (156), Expect = 2e-31
Identities = 129/163 (79%), Gaps = 0/163 (0%)
Strand=Plus/Minus
Query 152 CCAATATTCCTCACTGCTGCCTCCCGTAGGAGTTTGGACCGTGTCTCAGTTCCAATGTGG 211
|||||||||| ||||||||||||||||||||| ||| |||| ||||||| ||| |||||
Sbjct 353 CCAATATTCCCTACTGCTGCCTCCCGTAGGAGTCTGGCCCGTATCTCAGTGCCAGTGTGG 294
Query 212 GGGACCTTCCTCTCAGAACCCCTATCCATCGTAGGCTAGGTGGGCCGTTACCCCGCCTAC 271
||| | |||||||||| |||||| ||| | | || |||| ||||||||||| || ||
Sbjct 293 GGGCCGCTCCTCTCAGAGCCCCTACTGATCATCGCCTTGGTGAGCCGTTACCCCACCAAC 234
Query 272 TACCTAATGGAACGCATCCCCATCGTACACCGATGAATCTTTA 314
|| ||||| ||||| |||||| ||| || ||| ||||
Sbjct 233 TAGCTAATCAGACGCAAGCCCATCCACTACCAATAAATTTTTA 191
>seq101571
Length=235
Score = 132 bits (146), Expect = 1e-28
Identities = 111/136 (82%), Gaps = 0/136 (0%)
Strand=Plus/Minus
Query 181 GAGTTTGGACCGTGTCTCAGTTCCAATGTGGGGGACCTTCCTCTCAGAACCCCTATCCAT 240
|||| ||| |||||||||||| ||| ||||||||| || |||||||| ||||||| ||||
Sbjct 235 GAGTCTGGTCCGTGTCTCAGTACCAGTGTGGGGGATCTCCCTCTCAGGACCCCTACCCAT 176
Query 241 CGTAGGCTAGGTGGGCCGTTACCCCGCCTACTACCTAATGGAACGCATCCCCATCGTACA 300
| ||| || |||| ||||||||| | || |||| ||||||| |||||| | |||| | |
Sbjct 175 CATAGCCTTGGTGTGCCGTTACCACACCAACTAGCTAATGGGACGCATGCTCATCTTGTA 116
Query 301 CCGATGAATCTTTAAT 316
||| || | |||||||
Sbjct 115 CCGTTGGAACTTTAAT 100
>seq40001
Length=498
Score = 120 bits (132), Expect = 6e-25
Identities = 160/220 (73%), Gaps = 13/220 (6%)
Strand=Plus/Plus
Query 1 GGCTGCTGGCACGGAGTTAGCCGATGCTTATTCATAAGGTACA-----TACAAGCTCC-- 53
||||||||||||| ||||||||| |||| | | |||||| | |||| |
Sbjct 280 GGCTGCTGGCACGTAGTTAGCCGGGGCTTTCTTCTCAGGTACCGTCACTCCAAGTGCAGT 339
Query 54 --CACACGTGGAAGGTTTTATTCCCTTATAAAAGAAGTTTACAATCCGTAGAACCTTCAT 111
| ||| |||| | || |||||| || ||| ||||| ||||| | |||||||||
Sbjct 340 TACTCACCTGGACG---TTCTTCCCTGGCAACAGAGCTTTACGATCCGAA-AACCTTCAT 395
Query 112 CCTTCACGCTACTTGGCTGGTTCAGACTCTCGTCCATTGACCAATATTCCTCACTGCTGC 171
| |||||| | | ||| |||| || ||| |||||| || ||||| ||||||||
Sbjct 396 CACTCACGCGGCATTGCTCCATCAGGCTTTCGCCCATTGTGGAAGATTCCCTACTGCTGC 455
Query 172 CTCCCGTAGGAGTTTGGACCGTGTCTCAGTTCCAATGTGG 211
||||||||||||| ||| |||||||||||| ||| |||||
Sbjct 456 CTCCCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAGTGTGG 495
>seq473580
Length=775
Score = 114 bits (126), Expect = 3e-23
Identities = 145/198 (73%), Gaps = 1/198 (1%)
Strand=Plus/Plus
Query 82 AAAGAAGTTTACAATCCGTAGAACCTTCATCCTTCACGCTACTTGGCTGGTTCAGACTCT 141
||||| |||||||| ||| || || |||||| |||| | | |||| |||| ||
Sbjct 4 AAAGAGGTTTACAACCCGAAGG-CCGTCATCCCCCACGTGGCGTTGCTGCGTCAGGCTTC 62
Query 142 CGTCCATTGACCAATATTCCTCACTGCTGCCTCCCGTAGGAGTTTGGACCGTGTCTCAGT 201
|| |||||| ||| ||||| |||||||||||||||||||||| ||| |||| |||||||
Sbjct 63 CGCCCATTGCGCAAGATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTATCTCAGT 122
Query 202 TCCAATGTGGGGGACCTTCCTCTCAGAACCCCTATCCATCGTAGGCTAGGTGGGCCGTTA 261
||| ||||| | | |||||||| | ||| || |||| | || ||| ||| | |
Sbjct 123 CCCAGTGTGGCCGGTCACCCTCTCAGGCCGGCTACCCGTCGTCGCCTTGGTACGCCATCA 182
Query 262 CCCCGCCTACTACCTAAT 279
|| | || || | || ||
Sbjct 183 CCGCACCAACAAGCTGAT 200
>seq323032
Length=3878
Score = 113 bits (124), Expect = 1e-22
Identities = 161/228 (71%), Gaps = 18/228 (8%)
Strand=Plus/Plus
Query 1 GGCTGCTGGCACGGAGTTAGCCGATGCTTATTCATAAGGTACATACAAGCTCCCACACGT 60
|||||||||||| ||||||| ||||||||||| | || ||| || |
Sbjct 3280 GGCTGCTGGCACAGAGTTAGATGATGCTTATTCCTCAGATACCGTCAT-----------T 3328
Query 61 GGAAGGTTTTATTCCCTTATAAAAGAAGTTTACAATCCGTAGAACCTTCATCCTTCACGC 120
| ||| ||| | | |||||||||| || | | |||| ||||| ||| |||||
Sbjct 3329 G------TTTCTTCTCCGAGAAAAGAAGTTGACGACCTGTAGG-CCTTCCACCTCCACGC 3381
Query 121 TACTTGGCTGGTTCAGACTCTCGTCCATTGACCAATATTCCTCACTGCTGCCTCCCGTAG 180
| | ||| |||| || ||| ||||| || ||||| ||||||||||||||||||
Sbjct 3382 GGCATTGCTCCGTCAGGCTTTCGCCCATTACGTAAAATTCCCCACTGCTGCCTCCCGTAG 3441
Query 181 GAGTTTGGACCGTGTCTCAGTTCCAATGTGGGGGACCTTCCTCTCAGA 228
|||| ||| | |||||||||| ||| ||||| || | ||||||| ||
Sbjct 3442 GAGTCTGGGCTGTGTCTCAGTCCCAGTGTGGTTGATCATCCTCTCGGA 3489
>seq86598
Length=14488
Score = 109 bits (120), Expect = 1e-21
Identities = 191/279 (68%), Gaps = 18/279 (6%)
Strand=Plus/Minus
Query 1 GGCTGCTGGCACGGAGTTAGCCGATGCTTATTCATAAGGTACATACAAGCTCCCACACGT 60
|| ||||||||| ||||||| |||||||||||| | || ||| || |
Sbjct 2318 GGTTGCTGGCACAGAGTTAGTCGATGCTTATTCCTCAGATACCGTCAT-----------T 2270
Query 61 GGAAGGTTTTATTCCCTTATAAAAGAAGTTTACAATCCGTAGAACCTTCATCCTTCACGC 120
| ||| ||| || | |||||||||| || | ||||| | | |||| | || |
Sbjct 2269 G------TTTCTTCTCTGAGAAAAGAAGTTGACGACTCGTAGGCCTTCCATC-TCCATGT 2217
Query 121 TACTTGGCTGGTTCAGACTCTCGTCCATTGACCAATATTCCTCACTGCTGCCTCCCGTAG 180
| | ||| |||| || | | |||||| || ||||| ||||||||||||||||||
Sbjct 2216 GGCATTGCTCCGTCAGGCTTTTGCCCATTGTGGAAAATTCCCCACTGCTGCCTCCCGTAG 2157
Query 181 GAGTTTGGACCGTGTCTCAGTTCCAATGTGGGGGACCTTCCTCTCAGAACCCCTATCCAT 240
|||| ||| |||||||||| | ||| ||||| || | ||||||| || | ||| ||
Sbjct 2156 GAGTCTGGGCCGTGTCTCAATCCCAGTGTGGCTGATCATCCTCTCGGACCAGCTACTAAT 2097
Query 241 CGTAGGCTAGGTGGGCCGTTACCCCGCCTACTACCTAAT 279
| | | || ||| || || || | || |||| |||||
Sbjct 2096 CATCGCCTTGGTAAGCTATTGCCTCACCAACTAGCTAAT 2058
>seq316935
Length=216
Score = 105 bits (116), Expect = 1e-20
Identities = 109/140 (78%), Gaps = 2/140 (1%)
Strand=Plus/Minus
Query 191 CGTGTCTCAGTTCCAATGTGGGGGACCTTCCTCTCAGAACCCCTATCCATCGTAGGCTAG 250
||||||||||| ||| ||||||||| |||||||||| |||||| |||||| | || |
Sbjct 216 CGTGTCTCAGTACCAGTGTGGGGGATTCTCCTCTCAGAGCCCCTAGACATCGTCGCCTTG 157
Query 251 GTGGGCCGTTACCCCGCCTACTACCTAATGGAACGCATCCCCATCGTACACCGATGAATC 310
||||||||||||||| || |||| |||||| |||| |||||| || || |||
Sbjct 156 GTGGGCCGTTACCCCACCAACTAGCTAATGTCACGCGAGCCCATCCATATCCTATAAATA 97
Query 311 TTTAA-TGATGATACCATGC 329
||||| | || ||||||||
Sbjct 96 TTTAACAGCTG-TACCATGC 78
>seq125478
Length=564
Score = 104 bits (114), Expect = 5e-20
Identities = 95/120 (79%), Gaps = 0/120 (0%)
Strand=Plus/Minus
Query 1 GGCTGCTGGCACGGAGTTAGCCGATGCTTATTCATAAGGTACATACAAGCTCCCACACGT 60
||||||||||||||||||||||||| ||||||| || |||| || | | ||||
Sbjct 126 GGCTGCTGGCACGGAGTTAGCCGATCCTTATTCCTACAGTACCGTCAGTCCTTCTCACGA 67
Query 61 GGAAGGTTTTATTCCCTTATAAAAGAAGTTTACAATCCGTAGAACCTTCATCCTTCACGC 120
| | || ||| |||| |||||||| |||||||||||| ||| ||| ||||||| |||||
Sbjct 66 GAAGGGGTTTCTTCCTGTATAAAAGCAGTTTACAATCCATAGGACCGTCATCCTGCACGC 7
>seq321222
Length=580
Score = 95.1 bits (104), Expect = 3e-17
Identities = 84/105 (80%), Gaps = 0/105 (0%)
Strand=Plus/Plus
Query 191 CGTGTCTCAGTTCCAATGTGGGGGACCTTCCTCTCAGAACCCCTATCCATCGTAGGCTAG 250
||||||||||| ||| ||||||||| |||||||||| |||||| |||||| | || |
Sbjct 1 CGTGTCTCAGTACCAGTGTGGGGGATTCTCCTCTCAGAGCCCCTAGACATCGTCGCCTTG 60
Query 251 GTGGGCCGTTACCCCGCCTACTACCTAATGGAACGCATCCCCATC 295
||| ||||||||| | || |||| |||||| |||| ||||||
Sbjct 61 GTGAGCCGTTACCTCACCAACTAGCTAATGTCACGCGAGCCCATC 105
>seq120832
Length=624
Score = 89.7 bits (98), Expect = 1e-15
Identities = 108/147 (73%), Gaps = 0/147 (0%)
Strand=Plus/Minus
Query 133 TCAGACTCTCGTCCATTGACCAATATTCCTCACTGCTGCCTCCCGTAGGAGTTTGGACCG 192
|||| || ||| |||||| || ||||| |||||||||||||| ||||||| ||| | |
Sbjct 236 TCAGGCTTTCGCCCATTGCGGAAAATTCCCCACTGCTGCCTCCCATAGGAGTCTGGGCTG 177
Query 193 TGTCTCAGTTCCAATGTGGGGGACCTTCCTCTCAGAACCCCTATCCATCGTAGGCTAGGT 252
||||||||| ||| ||||| || | ||||||| || | ||| ||| | || |||
Sbjct 176 TGTCTCAGTCCCAGTGTGGCTGATCATCCTCTCGGACCAGCTACTGATCATCACCTTGGT 117
Query 253 GGGCCGTTACCCCGCCTACTACCTAAT 279
|| || || | || |||| |||||
Sbjct 116 AAGCTATTGCCTCACCAACTAGCTAAT 90
>seq183381
Length=792
Score = 87.8 bits (96), Expect = 4e-15
Identities = 98/131 (75%), Gaps = 0/131 (0%)
Strand=Plus/Plus
Query 183 GTTTGGACCGTGTCTCAGTTCCAATGTGGGGGACCTTCCTCTCAGAACCCCTATCCATCG 242
|| ||| |||||||||||| ||| ||||| || | |||||||||| | ||| ||||
Sbjct 1 GTCTGGGCCGTGTCTCAGTCCCAGTGTGGCTGATCATCCTCTCAGACCAGCTAAGGATCG 60
Query 243 TAGGCTAGGTGGGCCGTTACCCCGCCTACTACCTAATGGAACGCATCCCCATCGTACACC 302
| |||| ||| |||| ||||||| || |||||||||| |||| | |||| | |
Sbjct 61 TCGGCTTGGTAGGCCATTACCCCACCAACTACCTAATCCTACGCGGGCTCATCCCTCGGC 120
Query 303 GATGAATCTTT 313
||| |||||||
Sbjct 121 GATAAATCTTT 131
>seq162720
Length=707
Score = 86.0 bits (94), Expect = 1e-14
Identities = 107/147 (73%), Gaps = 0/147 (0%)
Strand=Plus/Minus
Query 133 TCAGACTCTCGTCCATTGACCAATATTCCTCACTGCTGCCTCCCGTAGGAGTTTGGACCG 192
|||| || || |||||| || ||||| |||||||||||| ||||||||| ||| |||
Sbjct 623 TCAGGCTTTCACCCATTGTGGAAAATTCCCCACTGCTGCCTCTCGTAGGAGTCTGGGCCG 564
Query 193 TGTCTCAGTTCCAATGTGGGGGACCTTCCTCTCAGAACCCCTATCCATCGTAGGCTAGGT 252
|||||| || | | ||||| || | ||||||| || | ||| ||| | | || |||
Sbjct 563 TGTCTCGGTCCTAGTGTGGCTGATCATCCTCTCGGACCAGCTACTGATCATTGCCTTGGT 504
Query 253 GGGCCGTTACCCCGCCTACTACCTAAT 279
|| || || | || |||| |||||
Sbjct 503 AAGCTATTGCCTCACCAACTAGCTAAT 477
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1063182098624
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |