Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ensete_20ventricosum_20[genbank_20GCA_5F000818735.2_202015-11-23]
45,745 sequences; 451,284,018 total letters
Query= AAMG01000538.1
Length=248
Score E
Sequences producing significant alignments: (Bits) Value
seq519 145 1e-32
seq20979 141 1e-31
seq731 141 1e-31
seq10492 118 1e-24
seq1397 114 2e-23
seq11490 111 2e-22
seq4935 105 9e-21
>seq519
Length=62486
Score = 145 bits (160), Expect = 1e-32
Identities = 183/245 (75%), Gaps = 10/245 (4%)
Strand=Plus/Plus
Query 6 CCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCACGGACC 65
||||||| ||||||||||| ||||| | ||||||||| ||||| ||| ||| | ||
Sbjct 51607 CCTTCCAGCACCGGGCAGGTGTCAGACTCTATACATCGTGTTACCA-CTTAGCAGAGTCC 51665
Query 66 TGTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCTCA-ACAC 124
|||||||||| |||||||||||| ||| || | | ||| || | | ||| |
Sbjct 51666 TGTGTTTTTAATAAACAGTCGCTACCCCCTGGTATGTGCCACTTTCCTAA--TCATAGTT 51723
Query 125 GTCGTTCACCAGCAGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTCC 184
|| || || || | ||||||||||||||||||||||||| ||||||||||| ||||
Sbjct 51724 GTATTT----AGGAGAG-CACCCCTTCTCCCGAAGTTACGGGGTCATTTTGCCGAGTTCC 51778
Query 185 TTAACCACAGTTCACCCGA-ACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGGTTTA 243
|| || |||| | ||| |||| |||||| || ||| || ||||||||||||||
Sbjct 51779 TTCGACATGGTTCTCTCGATGCGCCCTAGTATACTATACTTGTGAACCTGTGTCGGTTTG 51838
Query 244 CGGTA 248
||||
Sbjct 51839 GGGTA 51843
>seq20979
Length=5273
Score = 141 bits (156), Expect = 1e-31
Identities = 177/243 (73%), Gaps = 20/243 (8%)
Strand=Plus/Minus
Query 6 CCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCACGGACC 65
|||||| ||| ||||||||||||| || |||||| | ||||| | ||| || ||||
Sbjct 1976 CCTTCCGGCACTGGGCAGGCGTCAGCCCCCATACATGGTCTTAC-GACTTTGCGGAGACC 1918
Query 66 TGTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCTCAACACG 125
||||||||| |||||||||||| || || |||||||| ||
Sbjct 1917 TGTGTTTTTGGTAAACAGTCGCCCGGGCCTGGTCACTGCGACCCCCT------------- 1871
Query 126 TCGTTCACCAGCAGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTCCT 185
| || || || ||||||||||||||||||||||||||| |||||||||| |||||
Sbjct 1870 TTGTG----AGGAG--GCACCCCTTCTCCCGAAGTTACGGGGCTATTTTGCCGAGTTCCT 1817
Query 186 TAACCACAGTTCACCCGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGGTTTACG 245
|| | |||| | || | ||| ||||||||||||| |||||||||||||||| |
Sbjct 1816 TAGAGAGAGTTGTCTCGCGCCCCTAGGTATTCTCTACCTACCCACCTGTGTCGGTTTCGG 1757
Query 246 GTA 248
|||
Sbjct 1756 GTA 1754
>seq731
Length=56363
Score = 141 bits (156), Expect = 1e-31
Identities = 177/243 (73%), Gaps = 20/243 (8%)
Strand=Plus/Minus
Query 6 CCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCACGGACC 65
|||||| ||| ||||||||||||| || |||||| | ||||| | ||| || ||||
Sbjct 42093 CCTTCCGGCACTGGGCAGGCGTCAGCCCCCATACATGGTCTTAC-GACTTTGCGGAGACC 42035
Query 66 TGTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCTCAACACG 125
||||||||| |||||||||||| || || |||||||| ||
Sbjct 42034 TGTGTTTTTGGTAAACAGTCGCCCGGGCCTGGTCACTGCGACCCCCT------------- 41988
Query 126 TCGTTCACCAGCAGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTCCT 185
| || || || ||||||||||||||||||||||||||| |||||||||| |||||
Sbjct 41987 TTGTG----AGGAG--GCACCCCTTCTCCCGAAGTTACGGGGCTATTTTGCCGAGTTCCT 41934
Query 186 TAACCACAGTTCACCCGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGGTTTACG 245
|| | |||| | || | ||| ||||||||||||| |||||||||||||||| |
Sbjct 41933 TAGAGAGAGTTGTCTCGCGCCCCTAGGTATTCTCTACCTACCCACCTGTGTCGGTTTCGG 41874
Query 246 GTA 248
|||
Sbjct 41873 GTA 41871
>seq10492
Length=13276
Score = 118 bits (130), Expect = 1e-24
Identities = 172/243 (71%), Gaps = 20/243 (8%)
Strand=Plus/Minus
Query 6 CCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCACGGACC 65
|||||| ||| || ||||||||| || |||||| | ||||| | ||| || ||||
Sbjct 9979 CCTTCCGGCACTGGATAGGCGTCAGCCCCCATACATGGTCTTAC-GACTTTGCGGAGACC 9921
Query 66 TGTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCTCAACACG 125
| ||||||| |||||||||||| || || ||| |||| ||
Sbjct 9920 TATGTTTTTGGTAAACAGTCGCCCGGGCCTGGTCACTGTGACCCCCT------------- 9874
Query 126 TCGTTCACCAGCAGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTCCT 185
| || || || ||||||||||||||||||||||||||| |||||||||| |||||
Sbjct 9873 TTGTG----AGGAG--GCACCCCTTCTCCCGAAGTTACGGGGCTATTTTGCCGAGTTCCT 9820
Query 186 TAACCACAGTTCACCCGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGGTTTACG 245
|| | |||| | || | ||| ||||||||||||| |||||| ||||||||| |
Sbjct 9819 TAGAGAGAGTTGTCTCGCGCCCCTAGGTATTCTCTACCTACCCACCTATGTCGGTTTCGG 9760
Query 246 GTA 248
|||
Sbjct 9759 GTA 9757
>seq1397
Length=44699
Score = 114 bits (126), Expect = 2e-23
Identities = 90/108 (83%), Gaps = 0/108 (0%)
Strand=Plus/Plus
Query 141 GGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTCCTTAACCACAGTTCACC 200
|||||||||||||||||||||||||||| |||||||||| ||||||| | |||| |
Sbjct 15091 GGCACCCCTTCTCCCGAAGTTACGGGGCTATTTTGCCGAGTTCCTTAGAGAGAGTTGTCT 15150
Query 201 CGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGGTTTACGGTA 248
|| | ||| ||||||||||||| |||||||||||||||| ||||
Sbjct 15151 CGCGCCCCTAGGTATTCTCTACCTACCCACCTGTGTCGGTTTCGGGTA 15198
>seq11490
Length=12124
Score = 111 bits (122), Expect = 2e-22
Identities = 90/108 (83%), Gaps = 1/108 (1%)
Strand=Plus/Plus
Query 141 GGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTCCTTAACCACAGTTCACC 200
|||||||||||||||||||||||||||| |||||||||| ||||||| | |||| |
Sbjct 10552 GGCACCCCTTCTCCCGAAGTTACGGGGCTATTTTGCCGAGTTCCTTAGAGAGAGTTGTCT 10611
Query 201 CGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGGTTTACGGTA 248
|| | ||| ||||||||||||| |||||| ||||||||| |||||
Sbjct 10612 CGCGCCCCTAGGTATTCTCTACCTACCCACCTATGTCGGTTT-CGGTA 10658
>seq4935
Length=24063
Score = 105 bits (116), Expect = 9e-21
Identities = 88/108 (81%), Gaps = 0/108 (0%)
Strand=Plus/Minus
Query 141 GGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTCCTTAACCACAGTTCACC 200
|||||||||||||||||||||||||||| |||||||||| ||||||| | |||| |
Sbjct 17628 GGCACCCCTTCTCCCGAAGTTACGGGGCTATTTTGCCGAGTTCCTTAGAGAGAGTTGTCT 17569
Query 201 CGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGGTTTACGGTA 248
| | ||| ||||||||||||| |||||| ||||||||| ||||
Sbjct 17568 CATGCCCCTAGGTATTCTCTACCTACCCACCTATGTCGGTTTCAGGTA 17521
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 694092273385
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |