Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ensete_20ventricosum_20[genbank_20GCA_5F000818735.2_202015-11-23]
45,745 sequences; 451,284,018 total letters
Query= AAMG01001083.1
Length=339
Score E
Sequences producing significant alignments: (Bits) Value
seq20979 183 6e-44
seq10492 183 6e-44
seq731 183 6e-44
seq15655 131 3e-28
seq519 107 4e-21
seq25381 105 1e-20
>seq20979
Length=5273
Score = 183 bits (202), Expect = 6e-44
Identities = 180/230 (78%), Gaps = 2/230 (1%)
Strand=Plus/Plus
Query 111 GGGACAGTGTCAGTCGGGCAGTTTGACTGGGGCGGTCGCCTCCCAAAGAGTAACGGAGGC 170
|||||||| |||| | |||||| ||||||| |||||||||| |||||||||||
Sbjct 2355 GGGACAGTCTCAGGTAGACAGTTTCTATGGGGCGTAGGCCTCCCAAAAGGTAACGGAGGC 2414
Query 171 GCCCAAAGATACCCTCAGCTTGGATGGAAACCATGCGCAC-AGTGCAAAGGCAAAAGGGT 229
| ||||| | |||| | ||| ||| | || | | |||||||||||| |||||
Sbjct 2415 GTGCAAAGGTTTCCTCGGGCCGGACGGAGATTG-GCCCTCGAGTGCAAAGGCAGAAGGGA 2473
Query 230 GTTTGACTGCGACACCCTCAAGTCTAGCAGGGACGAAAGTCGGGCTTAATGATCCGGCGG 289
| |||||||| | |||| | ||| |||||||||||||||||| |||| ||||||| |||
Sbjct 2474 GCTTGACTGCAAGACCCACCCGTCGAGCAGGGACGAAAGTCGGCCTTAGTGATCCGACGG 2533
Query 290 TGCTGAATGGAACGGCCGTCGCTCGACGGATAAAAGCTACCCTGGGGATA 339
||| || ||||| ||||||||||| ||||||||||| ||| || ||||||
Sbjct 2534 TGCCGAGTGGAAGGGCCGTCGCTCAACGGATAAAAGTTACTCTAGGGATA 2583
>seq10492
Length=13276
Score = 183 bits (202), Expect = 6e-44
Identities = 180/230 (78%), Gaps = 2/230 (1%)
Strand=Plus/Plus
Query 111 GGGACAGTGTCAGTCGGGCAGTTTGACTGGGGCGGTCGCCTCCCAAAGAGTAACGGAGGC 170
|||||||| |||| | |||||| ||||||| |||||||||| |||||||||||
Sbjct 10358 GGGACAGTCTCAGGTAGACAGTTTCTATGGGGCGTAGGCCTCCCAAAAGGTAACGGAGGC 10417
Query 171 GCCCAAAGATACCCTCAGCTTGGATGGAAACCATGCGCAC-AGTGCAAAGGCAAAAGGGT 229
| ||||| | |||| | ||| ||| | || | | |||||||||||| |||||
Sbjct 10418 GTGCAAAGGTTTCCTCGGGCCGGACGGAGATTG-GCCCTCGAGTGCAAAGGCAGAAGGGA 10476
Query 230 GTTTGACTGCGACACCCTCAAGTCTAGCAGGGACGAAAGTCGGGCTTAATGATCCGGCGG 289
| |||||||| | |||| | ||| |||||||||||||||||| |||| ||||||| |||
Sbjct 10477 GCTTGACTGCAAGACCCACCCGTCGAGCAGGGACGAAAGTCGGCCTTAGTGATCCGACGG 10536
Query 290 TGCTGAATGGAACGGCCGTCGCTCGACGGATAAAAGCTACCCTGGGGATA 339
||| || ||||| ||||||||||| ||||||||||| ||| || ||||||
Sbjct 10537 TGCCGAGTGGAAGGGCCGTCGCTCAACGGATAAAAGTTACTCTAGGGATA 10586
>seq731
Length=56363
Score = 183 bits (202), Expect = 6e-44
Identities = 180/230 (78%), Gaps = 2/230 (1%)
Strand=Plus/Plus
Query 111 GGGACAGTGTCAGTCGGGCAGTTTGACTGGGGCGGTCGCCTCCCAAAGAGTAACGGAGGC 170
|||||||| |||| | |||||| ||||||| |||||||||| |||||||||||
Sbjct 42472 GGGACAGTCTCAGGTAGACAGTTTCTATGGGGCGTAGGCCTCCCAAAAGGTAACGGAGGC 42531
Query 171 GCCCAAAGATACCCTCAGCTTGGATGGAAACCATGCGCAC-AGTGCAAAGGCAAAAGGGT 229
| ||||| | |||| | ||| ||| | || | | |||||||||||| |||||
Sbjct 42532 GTGCAAAGGTTTCCTCGGGCCGGACGGAGATTG-GCCCTCGAGTGCAAAGGCAGAAGGGA 42590
Query 230 GTTTGACTGCGACACCCTCAAGTCTAGCAGGGACGAAAGTCGGGCTTAATGATCCGGCGG 289
| |||||||| | |||| | ||| |||||||||||||||||| |||| ||||||| |||
Sbjct 42591 GCTTGACTGCAAGACCCACCCGTCGAGCAGGGACGAAAGTCGGCCTTAGTGATCCGACGG 42650
Query 290 TGCTGAATGGAACGGCCGTCGCTCGACGGATAAAAGCTACCCTGGGGATA 339
||| || ||||| ||||||||||| ||||||||||| ||| || ||||||
Sbjct 42651 TGCCGAGTGGAAGGGCCGTCGCTCAACGGATAAAAGTTACTCTAGGGATA 42700
>seq15655
Length=8305
Score = 131 bits (144), Expect = 3e-28
Identities = 143/186 (77%), Gaps = 3/186 (2%)
Strand=Plus/Plus
Query 155 AAAGAGTAACGGAGGCGCCCAAAGATACCCTCAGCTTGGATGGAAACCATGCGCAC-AGT 213
|||| |||||||||||| ||||| | |||| | ||||| | || | | |||
Sbjct 5432 AAAG-GTAACGGAGGCGTGCAAAGGTTTCCTCGTGCCGAATGGAGATTG-GCCCTCGAGT 5489
Query 214 GCAAAGGCAAAAGGGTGTTTGACTGCGACACCCTCAAGTCTAGCAGGGACGAAAGTCGGG 273
||||||||| ||||| | |||||||| | |||| | ||| ||||||||||||||||||
Sbjct 5490 GCAAAGGCAGAAGGGAGCTTGACTGCAAGACCCACCCGTCGAGCAGGGACGAAAGTCGGC 5549
Query 274 CTTAATGATCCGGCGGTGCTGAATGGAACGGCCGTCGCTCGACGGATAAAAGCTACCCTG 333
|||| ||||| | | ||| || ||||| ||||||| ||| ||||||||||| ||| ||
Sbjct 5550 CTTAGTGATCTGACAATGCCGAGTGGAAGGGCCGTCACTCAACGGATAAAAGTTACTCTA 5609
Query 334 GGGATA 339
||||||
Sbjct 5610 GGGATA 5615
>seq519
Length=62486
Score = 107 bits (118), Expect = 4e-21
Identities = 165/234 (71%), Gaps = 6/234 (3%)
Strand=Plus/Minus
Query 107 TGACGGGACAGTGTCAGTCGGGCAGTTTGACTGGGGCGGTCGCCTCCCAAAGAGTAACGG 166
|| ||||||| | | || ||| ||||| ||||||||| |||||| ||||||||||||
Sbjct 51255 TGGCGGGACACTTTGAGGTGGGTAGTTTTTCTGGGGCGGATGCCTCCTAAAGAGTAACGG 51196
Query 167 AGGCGCCCAAAGATACCCTC-AGCTTGGATGGAAACCATGCGCACAGTGCAAAGGCAAAA 225
||| | | ||| || ||| ||| | ||| | | || || | || || | ||
Sbjct 51195 AGGTGTGCGAAGGTAGGCTCAAGCGTTGATTCAGCTCGTG-----AGCGTAATGGTATAA 51141
Query 226 GGGTGTTTGACTGCGACACCCTCAAGTCTAGCAGGGACGAAAGTCGGGCTTAATGATCCG 285
| || |||||| || ||| | ||| | ||| ||| |||||||| | || |||||||
Sbjct 51140 GCCTGCCTGACTGTGAGACCTACTGGTCGAACAGAGACTAAAGTCGGCCATAGTGATCCG 51081
Query 286 GCGGTGCTGAATGGAACGGCCGTCGCTCGACGGATAAAAGCTACCCTGGGGATA 339
| || | | ||||| ||| |||||| |||||| |||| ||| | |||||||
Sbjct 51080 GGAGTCCCGTGTGGAAGGGCTCTCGCTCAACGGATCAAAGGTACGCCGGGGATA 51027
>seq25381
Length=3716
Score = 105 bits (116), Expect = 1e-20
Identities = 81/96 (84%), Gaps = 0/96 (0%)
Strand=Plus/Plus
Query 211 AGTGCAAAGGCAAAAGGGTGTTTGACTGCGACACCCTCAAGTCTAGCAGGGACGAAAGTC 270
|||||||||||| ||||| | |||||||| | |||| | ||| ||||||||||||||||
Sbjct 32 AGTGCAAAGGCAGAAGGGAGCTTGACTGCAAGACCCACCCGTCGAGCAGGGACGAAAGTC 91
Query 271 GGGCTTAATGATCCGGCGGTGCTGAATGGAACGGCC 306
|| |||| ||||||| |||||| || ||||| ||||
Sbjct 92 GGCCTTAGTGATCCGACGGTGCCGAGTGGAAGGGCC 127
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 981950601120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |