Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ensete_20ventricosum_20[genbank_20GCA_5F000818735.2_202015-11-23]
45,745 sequences; 451,284,018 total letters
Query= AAMG01001178.1
Length=367
Score E
Sequences producing significant alignments: (Bits) Value
seq8764 230 5e-58
seq3783 230 5e-58
seq12963 203 7e-50
seq1023 154 3e-35
seq1100 143 6e-32
seq32455 138 2e-30
seq2968 134 3e-29
seq2655 125 2e-26
seq17192 116 8e-24
seq5989 100 6e-19
seq4598 82.4 2e-13
>seq8764
Length=15651
Score = 230 bits (254), Expect = 5e-58
Identities = 241/310 (78%), Gaps = 20/310 (6%)
Strand=Plus/Minus
Query 29 CACGCGGCATTGGCTGGATCAGGCTTTCGCCCATTGTCCAATATTCCCCACTGCTGCCTC 88
|||||||||||| || |||||||||||||||||| || ||||||||||||||||||
Sbjct 2440 CACGCGGCATTG-CTCCGTCAGGCTTTCGCCCATTGCGGAAAATTCCCCACTGCTGCCTC 2382
Query 89 CCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGACTGATCATCCTCTCAGACCAGTT 148
|||||||||||||| |||||||||||| |||||||| |||||||||||||| |||||| |
Sbjct 2381 CCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCTGATCATCCTCTCGGACCAGCT 2322
Query 149 ACGGATCGTCGCCTTGGTGAGCCATTACCTCACCAACTAGCTAATCCGAC-CTAGGCTCA 207
|| |||| |||||||||| ||| ||||||||||||||||||||||| ||| | || | |
Sbjct 2321 ACTGATCATCGCCTTGGTAAGCTATTACCTCACCAACTAGCTAATCAGACGCGAGCCCCT 2262
Query 208 TCTGATAGCGCAAGGCCCGAAGGTCCCCTGCTTTCTCCCGTAGGACGTATGCGGTATTAG 267
|| || ||| || ||| |||| | | | | | || | ||||||||
Sbjct 2261 CCT-----CG---GGC-----GGATTCCTCCTTTTGCTCCTCAG-CCTACGGGGTATTAG 2216
Query 268 CGTCCGTTTCCGAACGTTATCCCCCACTACCA--GGCAGATTCCTAGGCATTACTCACCC 325
| |||||||| ||| | ||| || ||| ||||| ||| || || ||||||||||
Sbjct 2215 CAACCGTTTCCAGTTGTTGTTCCC--CTCCCAAGGGCAGGTTCTTACGCGTTACTCACCC 2158
Query 326 GTCCGCCGCT 335
||||||| ||
Sbjct 2157 GTCCGCCACT 2148
>seq3783
Length=28200
Score = 230 bits (254), Expect = 5e-58
Identities = 241/310 (78%), Gaps = 20/310 (6%)
Strand=Plus/Minus
Query 29 CACGCGGCATTGGCTGGATCAGGCTTTCGCCCATTGTCCAATATTCCCCACTGCTGCCTC 88
|||||||||||| || |||||||||||||||||| || ||||||||||||||||||
Sbjct 18860 CACGCGGCATTG-CTCCGTCAGGCTTTCGCCCATTGCGGAAAATTCCCCACTGCTGCCTC 18802
Query 89 CCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGACTGATCATCCTCTCAGACCAGTT 148
|||||||||||||| |||||||||||| |||||||| |||||||||||||| |||||| |
Sbjct 18801 CCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCTGATCATCCTCTCGGACCAGCT 18742
Query 149 ACGGATCGTCGCCTTGGTGAGCCATTACCTCACCAACTAGCTAATCCGAC-CTAGGCTCA 207
|| |||| |||||||||| ||| ||||||||||||||||||||||| ||| | || | |
Sbjct 18741 ACTGATCATCGCCTTGGTAAGCTATTACCTCACCAACTAGCTAATCAGACGCGAGCCCCT 18682
Query 208 TCTGATAGCGCAAGGCCCGAAGGTCCCCTGCTTTCTCCCGTAGGACGTATGCGGTATTAG 267
|| || ||| || ||| |||| | | | | | || | ||||||||
Sbjct 18681 CCT-----CG---GGC-----GGATTCCTCCTTTTGCTCCTCAG-CCTACGGGGTATTAG 18636
Query 268 CGTCCGTTTCCGAACGTTATCCCCCACTACCA--GGCAGATTCCTAGGCATTACTCACCC 325
| |||||||| ||| | ||| || ||| ||||| ||| || || ||||||||||
Sbjct 18635 CAACCGTTTCCAGTTGTTGTTCCC--CTCCCAAGGGCAGGTTCTTACGCGTTACTCACCC 18578
Query 326 GTCCGCCGCT 335
||||||| ||
Sbjct 18577 GTCCGCCACT 18568
>seq12963
Length=10555
Score = 203 bits (224), Expect = 7e-50
Identities = 179/220 (81%), Gaps = 4/220 (2%)
Strand=Plus/Plus
Query 1 CTTTACAATCCGAA--GACCTTCTTTCACACACGCGGCATTGGCTGGATCAGGCTTTCGC 58
|||||||| | ||| | ||||||| ||| |||||| |||| ||||||| |||||||||
Sbjct 6211 CTTTACAAGCGGAATTGCCCTTCTT-CACTCACGCGATATTG-CTGGATCTGGCTTTCGC 6268
Query 59 CCATTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCC 118
||||||||||| |||||||||||| ||| ||||| |||||| || || ||||||||| ||
Sbjct 6269 CCATTGTCCAAGATTCCCCACTGCAGCCCCCCGTGGGAGTCCGGGCCCTGTCTCAGTCCC 6328
Query 119 AGTGTGACTGATCATCCTCTCAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCT 178
|||||| |||||||||| ||||||| || | ||| | | |||||| |||| ||||||
Sbjct 6329 AGTGTGGCTGATCATCCGAAAAGACCAGCTAAGCATCATTGGCTTGGTTAGCCTTTACCT 6388
Query 179 CACCAACTAGCTAATCCGACCTAGGCTCATCTGATAGCGC 218
|||||||| ||||| | || ||||||||| | |||||
Sbjct 6389 GACCAACTACCTAATACTACGCAGGCTCATCAAACAGCGC 6428
>seq1023
Length=49709
Score = 154 bits (170), Expect = 3e-35
Identities = 125/150 (83%), Gaps = 1/150 (1%)
Strand=Plus/Minus
Query 49 AGGCTTTCGCCCATTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTG 108
|||||||||| |||| || |||||| |||||| |||||| ||||||||||| |||||
Sbjct 2978 AGGCTTTCGCTCATTACGAAAAATTCCCTACTGCTACCTCCCATAGGAGTCTGGGCCGTG 2919
Query 109 TCTCAGTTCCAGTGTGACTGATCATCCTCTCAGACCAGTTACGGATCGTCGCCTTGGTGA 168
||||||| ||| ||| || |||||||||| ||| || ||| |||| |||||||| | |
Sbjct 2918 TCTCAGTCTCAG-GTGGCTAATCATCCTCTTGGACTAGCTACTGATCATCGCCTTGATAA 2860
Query 169 GCCATTACCTCACCAACTAGCTAATCCGAC 198
|| ||||||||||||||||||||||| |||
Sbjct 2859 GCTATTACCTCACCAACTAGCTAATCAGAC 2830
>seq1100
Length=48287
Score = 143 bits (158), Expect = 6e-32
Identities = 117/141 (83%), Gaps = 1/141 (1%)
Strand=Plus/Plus
Query 54 TTCGCCCATTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCA 113
||||| |||| || |||||| |||||| |||||| ||||||||||| ||||||||||
Sbjct 1 TTCGCTCATTACGAAAAATTCCCTACTGCTACCTCCCATAGGAGTCTGGGCCGTGTCTCA 60
Query 114 GTTCCAGTGTGACTGATCATCCTCTCAGACCAGTTACGGATCGTCGCCTTGGTGAGCCAT 173
|| |||| ||| || |||||||||| ||| || ||| |||| |||||||| | ||| ||
Sbjct 61 GTCCCAG-GTGGCTAATCATCCTCTTGGACTAGCTACTGATCATCGCCTTGATAAGCTAT 119
Query 174 TACCTCACCAACTAGCTAATC 194
||||||||| |||||||||||
Sbjct 120 TACCTCACCGACTAGCTAATC 140
>seq32455
Length=2251
Score = 138 bits (152), Expect = 2e-30
Identities = 95/106 (90%), Gaps = 1/106 (1%)
Strand=Plus/Plus
Query 29 CACGCGGCATTGGCTGGATCAGGCTTTCGCCCATTGTCCAATATTCCCCACTGCTGCCTC 88
|||||||||||| || |||||||||||||||||| || ||||||||||||||||||
Sbjct 2147 CACGCGGCATTG-CTCCGTCAGGCTTTCGCCCATTGCGGAAAATTCCCCACTGCTGCCTC 2205
Query 89 CCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGACTGATCATC 134
|||||||||||||| |||||||||||| |||||||| |||||||||
Sbjct 2206 CCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCTGATCATC 2251
>seq2968
Length=32214
Score = 134 bits (148), Expect = 3e-29
Identities = 121/152 (80%), Gaps = 0/152 (0%)
Strand=Plus/Minus
Query 46 ATCAGGCTTTCGCCCATTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACC 105
|||| ||| |||||||| || ||| ||||| ||||||||| || ||||||||| |
Sbjct 21636 ATCAAACTTCTGCCCATTGCAAAAAATTTGCCACTACTGCCTCCCATAAGAGTCTGGATC 21577
Query 106 GTGTCTCAGTTCCAGTGTGACTGATCATCCTCTCAGACCAGTTACGGATCGTCGCCTTGG 165
||||||| | | |||||| ||||||||||||||||| || || ||| ||| ||| |
Sbjct 21576 ATGTCTCAATCCTAGTGTGGCTGATCATCCTCTCAGATCAACTATTGATTATCGTCTTTG 21517
Query 166 TGAGCCATTACCTCACCAACTAGCTAATCCGA 197
| ||| ||||||||||||||||||||||| ||
Sbjct 21516 TAAGCTATTACCTCACCAACTAGCTAATCTGA 21485
>seq2655
Length=33981
Score = 125 bits (138), Expect = 2e-26
Identities = 90/104 (87%), Gaps = 0/104 (0%)
Strand=Plus/Minus
Query 47 TCAGGCTTTCGCCCATTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCG 106
||||| ||| ||||||| || |||||||| ||||||||| ||||||||||||| |||
Sbjct 12609 TCAGGTTTTTACCCATTGCGGAAAATTCCCCATTGCTGCCTCTCGTAGGAGTCTGGGCCG 12550
Query 107 TGTCTCAGTTCCAGTGTGACTGATCATCCTCTCAGACCAGTTAC 150
||||||||| |||||||| |||||||||||||| |||||| |||
Sbjct 12549 TGTCTCAGTCCCAGTGTGGCTGATCATCCTCTCGGACCAGCTAC 12506
>seq17192
Length=7262
Score = 116 bits (128), Expect = 8e-24
Identities = 78/87 (90%), Gaps = 0/87 (0%)
Strand=Plus/Plus
Query 112 CAGTTCCAGTGTGACTGATCATCCTCTCAGACCAGTTACGGATCGTCGCCTTGGTGAGCC 171
|||| |||||||| |||||||||||||| |||||| ||| |||| |||||||||| |||
Sbjct 1 CAGTCCCAGTGTGGCTGATCATCCTCTCGGACCAGCTACTGATCATCGCCTTGGTAAGCT 60
Query 172 ATTACCTCACCAACTAGCTAATCCGAC 198
||||||||||||||||||||||| |||
Sbjct 61 ATTACCTCACCAACTAGCTAATCAGAC 87
>seq5989
Length=21132
Score = 100 bits (110), Expect = 6e-19
Identities = 152/211 (72%), Gaps = 19/211 (9%)
Strand=Plus/Minus
Query 128 GATCATCCTCTCAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCTCACCAACTA 187
|||||||||||| |||||| ||| |||| |||||||||| ||| ||||||||||||||||
Sbjct 2646 GATCATCCTCTCGGACCAGCTACTGATCATCGCCTTGGTAAGCTATTACCTCACCAACTA 2587
Query 188 GCTAATCCGAC-CTAGGCTCATCTGATAGCGCAAGGCCCGAAGGTCCCCTGCTTTCTCCC 246
||||||| ||| | || | | || || ||| || ||| |||| | |
Sbjct 2586 GCTAATCAGACGCGAGCCCCTCCT-----CG---GGC-----GGATTCCTCCTTTTGCTC 2540
Query 247 GTAGGACGTATGCGGTATTAGCGTCCGTTTCCGAACGTTATCCCCCACTACCA--GGCAG 304
| | | || | ||||||||| |||||||| ||| | ||| || ||| ||||
Sbjct 2539 CTCAG-CCTACGGGGTATTAGCAACCGTTTCCAGTTGTTGTTCCC--CTCCCAAGGGCAA 2483
Query 305 ATTCCTAGGCATTACTCACCCGTCCGCCGCT 335
||| || || ||||||||||||||||| ||
Sbjct 2482 GTTCTTACGCGTTACTCACCCGTCCGCCACT 2452
>seq4598
Length=25118
Score = 82.4 bits (90), Expect = 2e-13
Identities = 59/67 (88%), Gaps = 1/67 (1%)
Strand=Plus/Minus
Query 29 CACGCGGCATTGGCTGGATCAGGCTTTCGCCCATTGTCCAATATTCCCCACTGCTGCCTC 88
|||||||||||| || |||||||||||||||||| || ||||||||||||||||||
Sbjct 18871 CACGCGGCATTG-CTCCGTCAGGCTTTCGCCCATTGCGGAAAATTCCCCACTGCTGCCTC 18813
Query 89 CCGTAGG 95
|||||||
Sbjct 18812 CCGTAGG 18806
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1071509613600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |