Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ensete_20ventricosum_20[genbank_20GCA_5F000818735.2_202015-11-23]
45,745 sequences; 451,284,018 total letters
Query= AAMG01001752.1
Length=400
Score E
Sequences producing significant alignments: (Bits) Value
seq20979 217 3e-54
seq731 208 2e-51
seq519 158 3e-36
seq10983 152 1e-34
seq9901 150 4e-34
seq24216 125 2e-26
>seq20979
Length=5273
Score = 217 bits (240), Expect = 3e-54
Identities = 300/409 (73%), Gaps = 18/409 (4%)
Strand=Plus/Minus
Query 1 CGACTACGCCTGTCGGCCTCGCCTTAGGACCCGACTCACCCAGGGCAGACAAACTTGACC 60
||||||||||| ||||||| |||||| || ||||||||| | ||| ||| | |
Sbjct 1513 CGACTACGCCTTTCGGCCTGATCTTAGGCCCTGACTCACCCTCCGTGGACGAACCTTGCG 1454
Query 61 CTGGAACCCTTGGATAATCGGCGGACGGGATTCCCACCCGTCACA-CGCTACTCATGCCT 119
||||||||| | | |||| | | |||||| |||| | || |||||| |||
Sbjct 1453 GAGGAACCCTTAGGTTTTCGGGGCATTGGATTCTCACCAATGTTTGCGTTACTCAAGCCG 1394
Query 120 GCATTCTCACT--CGCATCAACTCCACCACACAGTCACCCGGCAGCTTCACCACTGACAC 177
|||||||||| ||| || ||||| || | | ||| ||||| | || | |
Sbjct 1393 ACATTCTCACTTCCGCTTCG--TCCAC-ACCTGCTTGCGCGGGTGCTTCGCT-CTAAGGC 1338
Query 178 G--ACGCTCCCCTACCCAACCAC----ACAGGTTGCCACAGCTTCGGCGGATAACTTAAG 231
| ||||||||||||| | || ||| | ||||||||||||| ||| |||| |
Sbjct 1337 GGAACGCTCCCCTACCGATGCATTTTTACA---TCCCACAGCTTCGGCAGATCGCTTA-G 1282
Query 232 CCCCGCTACATTATCGGCGCGGAATCACTTGACCAGTGAGCTATTACGCACTCTTTCAAG 291
||||| | ||| ||||||| | | || || |||||||||||||||||||||||||||
Sbjct 1281 CCCCGTT-CATCTTCGGCGCAAGAGCGCTCGATCAGTGAGCTATTACGCACTCTTTCAAG 1223
Query 292 GATGGCTGCTTCCAAGCCAACCTCCTGGTTGTCTACGCAACTCCACATCCTTTCCCACTG 351
| |||||||||| | || |||||||||| ||||| ||| | | || |||||| |||||
Sbjct 1222 GGTGGCTGCTTCTAGGCAAACCTCCTGGCTGTCTCTGCACCCCTACCTCCTTTATCACTG 1163
Query 352 AGTCACCACTTAGGGGCCTTAGCTGATGATCTGGGCTGTTTCCCTCTCG 400
|| || |||||||||||||||| ||||| |||||||||||||||||
Sbjct 1162 AGCGGTCATTTAGGGGCCTTAGCTGGTGATCCGGGCTGTTTCCCTCTCG 1114
>seq731
Length=56363
Score = 208 bits (230), Expect = 2e-51
Identities = 298/409 (73%), Gaps = 18/409 (4%)
Strand=Plus/Minus
Query 1 CGACTACGCCTGTCGGCCTCGCCTTAGGACCCGACTCACCCAGGGCAGACAAACTTGACC 60
||||||||||| ||||||| |||||| || ||||||||| | |||| ||| | |
Sbjct 41630 CGACTACGCCTTTCGGCCTGATCTTAGGCCCTGACTCACCCTCCGTAGACGAACCTTGCG 41571
Query 61 CTGGAACCCTTGGATAATCGGCGGACGGGATTCCCACCCGTCACA-CGCTACTCATGCCT 119
||||||||| | | |||| | | |||||| ||| | || |||||| |||
Sbjct 41570 GAGGAACCCTTAGGTTTTCGGGGCATTGGATTCTCACTAATGTTTGCGTTACTCAAGCCG 41511
Query 120 GCATTCTCACT--CGCATCAACTCCACCACACAGTCACCCGGCAGCTTCACCACTGACAC 177
|||||||||| ||| || ||||| || | | ||| ||||| | || | |
Sbjct 41510 ACATTCTCACTTCCGCTTCG--TCCAC-ACCTGCTTGCGCGGGTGCTTCGCT-CTAAGGC 41455
Query 178 G--ACGCTCCCCTACCCAACCAC----ACAGGTTGCCACAGCTTCGGCGGATAACTTAAG 231
| ||||||||||||| | || ||| | ||||||||||||| ||| |||| |
Sbjct 41454 GGAACGCTCCCCTACCGATGCATTTTTACA---TCCCACAGCTTCGGCAGATCGCTTA-G 41399
Query 232 CCCCGCTACATTATCGGCGCGGAATCACTTGACCAGTGAGCTATTACGCACTCTTTCAAG 291
||||| | ||| ||||||| | | || || |||||||||||||| ||||||||||||
Sbjct 41398 CCCCGTT-CATCTTCGGCGCAAGAGCGCTCGATCAGTGAGCTATTACACACTCTTTCAAG 41340
Query 292 GATGGCTGCTTCCAAGCCAACCTCCTGGTTGTCTACGCAACTCCACATCCTTTCCCACTG 351
| |||||||||| | || |||||||||| ||||| ||| | || ||||||| ||||
Sbjct 41339 GGTGGCTGCTTCTAGGCAAACCTCCTGGCTGTCTCTGCACCCATACCTCCTTTCTCACTT 41280
Query 352 AGTCACCACTTAGGGGCCTTAGCTGATGATCTGGGCTGTTTCCCTCTCG 400
|| | | |||||||||||||||| ||||| |||||||||||||||||
Sbjct 41279 AGCGATCGTTTAGGGGCCTTAGCTGGTGATCCGGGCTGTTTCCCTCTCG 41231
>seq519
Length=62486
Score = 158 bits (174), Expect = 3e-36
Identities = 151/192 (79%), Gaps = 6/192 (3%)
Strand=Plus/Plus
Query 212 GCTTCGGCGGATAACTTAAGCCCCGCTACATTATCGGCGC---GGAATCACTTGACCAGT 268
||||||| | || |||| ||||| | ||||| |||| || ||| || |||||||
Sbjct 52299 GCTTCGGTGAATCACTTTAGCCCTGAGACATTTTCGGTGCTATGGAG---CTAGACCAGT 52355
Query 269 GAGCTATTACGCACTCTTTCAAGGATGGCTGCTTCCAAGCCAACCTCCTGGTTGTCTACG 328
|||||||||||| |||| ||||||||||||||||||||| |||||||||||||| ||
Sbjct 52356 GAGCTATTACGCTTTCTTCAAAGGATGGCTGCTTCCAAGCCCACCTCCTGGTTGTCATCG 52415
Query 329 CAACTCCACATCCTTTCCCACTGAGTCACCACTTAGGGGCCTTAGCTGATGATCTGGGCT 388
| || |||||| ||||| ||| | ||||||| ||||||| | ||||||||||
Sbjct 52416 CTCGATAACTTCCTTTTCCACTAAGTGATTGCTTAGGGACCTTAGCGTACGATCTGGGCT 52475
Query 389 GTTTCCCTCTCG 400
||||||||||||
Sbjct 52476 GTTTCCCTCTCG 52487
>seq10983
Length=12702
Score = 152 bits (168), Expect = 1e-34
Identities = 119/142 (84%), Gaps = 0/142 (0%)
Strand=Plus/Plus
Query 259 CTTGACCAGTGAGCTATTACGCACTCTTTCAAGGATGGCTGCTTCCAAGCCAACCTCCTG 318
|| || |||||||||||||||||||||||||||| |||||||||| | || |||||||||
Sbjct 10213 CTCGATCAGTGAGCTATTACGCACTCTTTCAAGGGTGGCTGCTTCTAGGCAAACCTCCTG 10272
Query 319 GTTGTCTACGCAACTCCACATCCTTTCCCACTGAGTCACCACTTAGGGGCCTTAGCTGAT 378
| ||||| ||| | | || |||||| ||||||| || ||||||||||| |||| |
Sbjct 10273 GCTGTCTCTGCACCCCTACCTCCTTTATCACTGAGCGGTCATTTAGGGGCCTTGGCTGGT 10332
Query 379 GATCTGGGCTGTTTCCCTCTCG 400
|||| |||||||||||||||||
Sbjct 10333 GATCCGGGCTGTTTCCCTCTCG 10354
>seq9901
Length=14021
Score = 150 bits (166), Expect = 4e-34
Identities = 233/322 (72%), Gaps = 18/322 (6%)
Strand=Plus/Plus
Query 63 GGAACCCTTGGATAATCGGCGGACGGGATTCCCACCCGTCACA-CGCTACTCATGCCTGC 121
||||||||| | | |||| | | |||||| |||| | || |||||| ||| |
Sbjct 12055 GGAACCCTTAGGTTTTCGGGGCATTGGATTCTCACCAATGTTTGCGTTACTCAAGCCGAC 12114
Query 122 ATTCTCACT--CGCATCAACTCCACCACACAGTCACCCGGCAGCTTCACCACTGACACG- 178
||||||||| ||| || ||||| || | | ||| ||||| | || | ||
Sbjct 12115 ATTCTCACTTCCGCTTCG--TCCAC-ACCTGCTTGCGCGGGTGCTTCGCT-CTAAGGCGG 12170
Query 179 -ACGCTCCCCTACCCAACCAC----ACAGGTTGCCACAGCTTCGGCGGATAACTTAAGCC 233
||||||||||||| | || ||| | ||||||||||||| ||| |||| |||
Sbjct 12171 AACGCTCCCCTACCGATGCATTTTTACA---TCCCACAGCTTCGGCAGATCGCTTA-GCC 12226
Query 234 CCGCTACATTATCGGCGCGGAATCACTTGACCAGTGAGCTATTACGCACTCTTTCAAGGA 293
||| | ||| ||||||| | | || || ||||||||||||||||||||||||||||
Sbjct 12227 CCGTT-CATCTTCGGCGCAAGAGCGCTCGATCAGTGAGCTATTACGCACTCTTTCAAGGG 12285
Query 294 TGGCTGCTTCCAAGCCAACCTCCTGGTTGTCTACGCAACTCCACATCCTTTCCCACTGAG 353
|||||||||| | || |||||||||| ||||| ||| | | || |||||| |||||||
Sbjct 12286 TGGCTGCTTCTAGGCAAACCTCCTGGCTGTCTCTGCACCCCTACCTCCTTTATCACTGAG 12345
Query 354 TCACCACTTAGGGGCCTTAGCT 375
|| |||||||||||||||
Sbjct 12346 CGGTCATTTAGGGGCCTTAGCT 12367
>seq24216
Length=4073
Score = 125 bits (138), Expect = 2e-26
Identities = 99/119 (83%), Gaps = 0/119 (0%)
Strand=Plus/Plus
Query 282 CTCTTTCAAGGATGGCTGCTTCCAAGCCAACCTCCTGGTTGTCTACGCAACTCCACATCC 341
||||||||||| |||||||||| | || |||||||||| ||||| ||| | | || |||
Sbjct 1 CTCTTTCAAGGGTGGCTGCTTCTAGGCAAACCTCCTGGCTGTCTCTGCACCCCTACCTCC 60
Query 342 TTTCCCACTGAGTCACCACTTAGGGGCCTTAGCTGATGATCTGGGCTGTTTCCCTCTCG 400
||| ||||||| || |||||||||||||||| ||||| |||||||||||||||||
Sbjct 61 TTTATCACTGAGCGGTCATTTAGGGGCCTTAGCTGGTGATCCGGGCTGTTTCCCTCTCG 119
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1177061306880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |