Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ensete_20ventricosum_20[genbank_20GCA_5F000818735.2_202015-11-23] 45,745 sequences; 451,284,018 total letters Query= AAMG01001752.1 Length=400 Score E Sequences producing significant alignments: (Bits) Value seq20979 217 3e-54 seq731 208 2e-51 seq519 158 3e-36 seq10983 152 1e-34 seq9901 150 4e-34 seq24216 125 2e-26 >seq20979 Length=5273 Score = 217 bits (240), Expect = 3e-54 Identities = 300/409 (73%), Gaps = 18/409 (4%) Strand=Plus/Minus Query 1 CGACTACGCCTGTCGGCCTCGCCTTAGGACCCGACTCACCCAGGGCAGACAAACTTGACC 60 ||||||||||| ||||||| |||||| || ||||||||| | ||| ||| | | Sbjct 1513 CGACTACGCCTTTCGGCCTGATCTTAGGCCCTGACTCACCCTCCGTGGACGAACCTTGCG 1454 Query 61 CTGGAACCCTTGGATAATCGGCGGACGGGATTCCCACCCGTCACA-CGCTACTCATGCCT 119 ||||||||| | | |||| | | |||||| |||| | || |||||| ||| Sbjct 1453 GAGGAACCCTTAGGTTTTCGGGGCATTGGATTCTCACCAATGTTTGCGTTACTCAAGCCG 1394 Query 120 GCATTCTCACT--CGCATCAACTCCACCACACAGTCACCCGGCAGCTTCACCACTGACAC 177 |||||||||| ||| || ||||| || | | ||| ||||| | || | | Sbjct 1393 ACATTCTCACTTCCGCTTCG--TCCAC-ACCTGCTTGCGCGGGTGCTTCGCT-CTAAGGC 1338 Query 178 G--ACGCTCCCCTACCCAACCAC----ACAGGTTGCCACAGCTTCGGCGGATAACTTAAG 231 | ||||||||||||| | || ||| | ||||||||||||| ||| |||| | Sbjct 1337 GGAACGCTCCCCTACCGATGCATTTTTACA---TCCCACAGCTTCGGCAGATCGCTTA-G 1282 Query 232 CCCCGCTACATTATCGGCGCGGAATCACTTGACCAGTGAGCTATTACGCACTCTTTCAAG 291 ||||| | ||| ||||||| | | || || ||||||||||||||||||||||||||| Sbjct 1281 CCCCGTT-CATCTTCGGCGCAAGAGCGCTCGATCAGTGAGCTATTACGCACTCTTTCAAG 1223 Query 292 GATGGCTGCTTCCAAGCCAACCTCCTGGTTGTCTACGCAACTCCACATCCTTTCCCACTG 351 | |||||||||| | || |||||||||| ||||| ||| | | || |||||| ||||| Sbjct 1222 GGTGGCTGCTTCTAGGCAAACCTCCTGGCTGTCTCTGCACCCCTACCTCCTTTATCACTG 1163 Query 352 AGTCACCACTTAGGGGCCTTAGCTGATGATCTGGGCTGTTTCCCTCTCG 400 || || |||||||||||||||| ||||| ||||||||||||||||| Sbjct 1162 AGCGGTCATTTAGGGGCCTTAGCTGGTGATCCGGGCTGTTTCCCTCTCG 1114 >seq731 Length=56363 Score = 208 bits (230), Expect = 2e-51 Identities = 298/409 (73%), Gaps = 18/409 (4%) Strand=Plus/Minus Query 1 CGACTACGCCTGTCGGCCTCGCCTTAGGACCCGACTCACCCAGGGCAGACAAACTTGACC 60 ||||||||||| ||||||| |||||| || ||||||||| | |||| ||| | | Sbjct 41630 CGACTACGCCTTTCGGCCTGATCTTAGGCCCTGACTCACCCTCCGTAGACGAACCTTGCG 41571 Query 61 CTGGAACCCTTGGATAATCGGCGGACGGGATTCCCACCCGTCACA-CGCTACTCATGCCT 119 ||||||||| | | |||| | | |||||| ||| | || |||||| ||| Sbjct 41570 GAGGAACCCTTAGGTTTTCGGGGCATTGGATTCTCACTAATGTTTGCGTTACTCAAGCCG 41511 Query 120 GCATTCTCACT--CGCATCAACTCCACCACACAGTCACCCGGCAGCTTCACCACTGACAC 177 |||||||||| ||| || ||||| || | | ||| ||||| | || | | Sbjct 41510 ACATTCTCACTTCCGCTTCG--TCCAC-ACCTGCTTGCGCGGGTGCTTCGCT-CTAAGGC 41455 Query 178 G--ACGCTCCCCTACCCAACCAC----ACAGGTTGCCACAGCTTCGGCGGATAACTTAAG 231 | ||||||||||||| | || ||| | ||||||||||||| ||| |||| | Sbjct 41454 GGAACGCTCCCCTACCGATGCATTTTTACA---TCCCACAGCTTCGGCAGATCGCTTA-G 41399 Query 232 CCCCGCTACATTATCGGCGCGGAATCACTTGACCAGTGAGCTATTACGCACTCTTTCAAG 291 ||||| | ||| ||||||| | | || || |||||||||||||| |||||||||||| Sbjct 41398 CCCCGTT-CATCTTCGGCGCAAGAGCGCTCGATCAGTGAGCTATTACACACTCTTTCAAG 41340 Query 292 GATGGCTGCTTCCAAGCCAACCTCCTGGTTGTCTACGCAACTCCACATCCTTTCCCACTG 351 | |||||||||| | || |||||||||| ||||| ||| | || ||||||| |||| Sbjct 41339 GGTGGCTGCTTCTAGGCAAACCTCCTGGCTGTCTCTGCACCCATACCTCCTTTCTCACTT 41280 Query 352 AGTCACCACTTAGGGGCCTTAGCTGATGATCTGGGCTGTTTCCCTCTCG 400 || | | |||||||||||||||| ||||| ||||||||||||||||| Sbjct 41279 AGCGATCGTTTAGGGGCCTTAGCTGGTGATCCGGGCTGTTTCCCTCTCG 41231 >seq519 Length=62486 Score = 158 bits (174), Expect = 3e-36 Identities = 151/192 (79%), Gaps = 6/192 (3%) Strand=Plus/Plus Query 212 GCTTCGGCGGATAACTTAAGCCCCGCTACATTATCGGCGC---GGAATCACTTGACCAGT 268 ||||||| | || |||| ||||| | ||||| |||| || ||| || ||||||| Sbjct 52299 GCTTCGGTGAATCACTTTAGCCCTGAGACATTTTCGGTGCTATGGAG---CTAGACCAGT 52355 Query 269 GAGCTATTACGCACTCTTTCAAGGATGGCTGCTTCCAAGCCAACCTCCTGGTTGTCTACG 328 |||||||||||| |||| ||||||||||||||||||||| |||||||||||||| || Sbjct 52356 GAGCTATTACGCTTTCTTCAAAGGATGGCTGCTTCCAAGCCCACCTCCTGGTTGTCATCG 52415 Query 329 CAACTCCACATCCTTTCCCACTGAGTCACCACTTAGGGGCCTTAGCTGATGATCTGGGCT 388 | || |||||| ||||| ||| | ||||||| ||||||| | |||||||||| Sbjct 52416 CTCGATAACTTCCTTTTCCACTAAGTGATTGCTTAGGGACCTTAGCGTACGATCTGGGCT 52475 Query 389 GTTTCCCTCTCG 400 |||||||||||| Sbjct 52476 GTTTCCCTCTCG 52487 >seq10983 Length=12702 Score = 152 bits (168), Expect = 1e-34 Identities = 119/142 (84%), Gaps = 0/142 (0%) Strand=Plus/Plus Query 259 CTTGACCAGTGAGCTATTACGCACTCTTTCAAGGATGGCTGCTTCCAAGCCAACCTCCTG 318 || || |||||||||||||||||||||||||||| |||||||||| | || ||||||||| Sbjct 10213 CTCGATCAGTGAGCTATTACGCACTCTTTCAAGGGTGGCTGCTTCTAGGCAAACCTCCTG 10272 Query 319 GTTGTCTACGCAACTCCACATCCTTTCCCACTGAGTCACCACTTAGGGGCCTTAGCTGAT 378 | ||||| ||| | | || |||||| ||||||| || ||||||||||| |||| | Sbjct 10273 GCTGTCTCTGCACCCCTACCTCCTTTATCACTGAGCGGTCATTTAGGGGCCTTGGCTGGT 10332 Query 379 GATCTGGGCTGTTTCCCTCTCG 400 |||| ||||||||||||||||| Sbjct 10333 GATCCGGGCTGTTTCCCTCTCG 10354 >seq9901 Length=14021 Score = 150 bits (166), Expect = 4e-34 Identities = 233/322 (72%), Gaps = 18/322 (6%) Strand=Plus/Plus Query 63 GGAACCCTTGGATAATCGGCGGACGGGATTCCCACCCGTCACA-CGCTACTCATGCCTGC 121 ||||||||| | | |||| | | |||||| |||| | || |||||| ||| | Sbjct 12055 GGAACCCTTAGGTTTTCGGGGCATTGGATTCTCACCAATGTTTGCGTTACTCAAGCCGAC 12114 Query 122 ATTCTCACT--CGCATCAACTCCACCACACAGTCACCCGGCAGCTTCACCACTGACACG- 178 ||||||||| ||| || ||||| || | | ||| ||||| | || | || Sbjct 12115 ATTCTCACTTCCGCTTCG--TCCAC-ACCTGCTTGCGCGGGTGCTTCGCT-CTAAGGCGG 12170 Query 179 -ACGCTCCCCTACCCAACCAC----ACAGGTTGCCACAGCTTCGGCGGATAACTTAAGCC 233 ||||||||||||| | || ||| | ||||||||||||| ||| |||| ||| Sbjct 12171 AACGCTCCCCTACCGATGCATTTTTACA---TCCCACAGCTTCGGCAGATCGCTTA-GCC 12226 Query 234 CCGCTACATTATCGGCGCGGAATCACTTGACCAGTGAGCTATTACGCACTCTTTCAAGGA 293 ||| | ||| ||||||| | | || || |||||||||||||||||||||||||||| Sbjct 12227 CCGTT-CATCTTCGGCGCAAGAGCGCTCGATCAGTGAGCTATTACGCACTCTTTCAAGGG 12285 Query 294 TGGCTGCTTCCAAGCCAACCTCCTGGTTGTCTACGCAACTCCACATCCTTTCCCACTGAG 353 |||||||||| | || |||||||||| ||||| ||| | | || |||||| ||||||| Sbjct 12286 TGGCTGCTTCTAGGCAAACCTCCTGGCTGTCTCTGCACCCCTACCTCCTTTATCACTGAG 12345 Query 354 TCACCACTTAGGGGCCTTAGCT 375 || ||||||||||||||| Sbjct 12346 CGGTCATTTAGGGGCCTTAGCT 12367 >seq24216 Length=4073 Score = 125 bits (138), Expect = 2e-26 Identities = 99/119 (83%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 282 CTCTTTCAAGGATGGCTGCTTCCAAGCCAACCTCCTGGTTGTCTACGCAACTCCACATCC 341 ||||||||||| |||||||||| | || |||||||||| ||||| ||| | | || ||| Sbjct 1 CTCTTTCAAGGGTGGCTGCTTCTAGGCAAACCTCCTGGCTGTCTCTGCACCCCTACCTCC 60 Query 342 TTTCCCACTGAGTCACCACTTAGGGGCCTTAGCTGATGATCTGGGCTGTTTCCCTCTCG 400 ||| ||||||| || |||||||||||||||| ||||| ||||||||||||||||| Sbjct 61 TTTATCACTGAGCGGTCATTTAGGGGCCTTAGCTGGTGATCCGGGCTGTTTCCCTCTCG 119 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1177061306880