Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ensete_20ventricosum_20[genbank_20GCA_5F000818735.2_202015-11-23]
45,745 sequences; 451,284,018 total letters
Query= AAMG01001821.1
Length=161
Score E
Sequences producing significant alignments: (Bits) Value
seq10617 127 2e-27
seq8764 127 2e-27
seq3783 127 2e-27
seq22908 118 9e-25
seq12963 118 9e-25
seq10783 113 4e-23
seq581 111 1e-22
>seq10617
Length=13118
Score = 127 bits (140), Expect = 2e-27
Identities = 124/160 (78%), Gaps = 0/160 (0%)
Strand=Plus/Minus
Query 2 CGAGTTGCAGACTACAATCCGGACTACGATACACTTTCTGGGATTAGCTCCCCCTCGCGG 61
|||||||||| || ||||||| ||| | ||| |||| ||||||| |||||||||
Sbjct 2705 CGAGTTGCAGCCTGCAATCCGAACTGAGGACGGGTTTTTGGGGTTAGCTCACCCTCGCGG 2646
Query 62 GTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCAT 121
| | ||| |||| ||| |||||||| ||||||| |||| |||||||| |||
Sbjct 2645 GATCGCGACCCTTTGTCCCGGCCATTGTAGCACGTGTGTCGCCCAGGGCATAAGGGGCAT 2586
Query 122 GAGGACTTGACGTCATCCCCACCTTCCTCCGGTTTGTCAC 161
|| ||||||||||||||| ||||||||||||| || ||||
Sbjct 2585 GATGACTTGACGTCATCCTCACCTTCCTCCGGCTTATCAC 2546
>seq8764
Length=15651
Score = 127 bits (140), Expect = 2e-27
Identities = 124/160 (78%), Gaps = 0/160 (0%)
Strand=Plus/Minus
Query 2 CGAGTTGCAGACTACAATCCGGACTACGATACACTTTCTGGGATTAGCTCCCCCTCGCGG 61
|||||||||| || ||||||| ||| | ||| |||| ||||||| |||||||||
Sbjct 3334 CGAGTTGCAGCCTGCAATCCGAACTGAGGACGGGTTTTTGGGGTTAGCTCACCCTCGCGG 3275
Query 62 GTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCAT 121
| | ||| |||| ||| |||||||| ||||||| |||| |||||||| |||
Sbjct 3274 GATCGCGACCCTTTGTCCCGGCCATTGTAGCACGTGTGTCGCCCAGGGCATAAGGGGCAT 3215
Query 122 GAGGACTTGACGTCATCCCCACCTTCCTCCGGTTTGTCAC 161
|| ||||||||||||||| ||||||||||||| || ||||
Sbjct 3214 GATGACTTGACGTCATCCTCACCTTCCTCCGGCTTATCAC 3175
>seq3783
Length=28200
Score = 127 bits (140), Expect = 2e-27
Identities = 124/160 (78%), Gaps = 0/160 (0%)
Strand=Plus/Minus
Query 2 CGAGTTGCAGACTACAATCCGGACTACGATACACTTTCTGGGATTAGCTCCCCCTCGCGG 61
|||||||||| || ||||||| ||| | ||| |||| ||||||| |||||||||
Sbjct 19754 CGAGTTGCAGCCTGCAATCCGAACTGAGGACGGGTTTTTGGGGTTAGCTCACCCTCGCGG 19695
Query 62 GTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCAT 121
| | ||| |||| ||| |||||||| ||||||| |||| |||||||| |||
Sbjct 19694 GATCGCGACCCTTTGTCCCGGCCATTGTAGCACGTGTGTCGCCCAGGGCATAAGGGGCAT 19635
Query 122 GAGGACTTGACGTCATCCCCACCTTCCTCCGGTTTGTCAC 161
|| ||||||||||||||| ||||||||||||| || ||||
Sbjct 19634 GATGACTTGACGTCATCCTCACCTTCCTCCGGCTTATCAC 19595
>seq22908
Length=4503
Score = 118 bits (130), Expect = 9e-25
Identities = 123/159 (77%), Gaps = 2/159 (1%)
Strand=Plus/Minus
Query 2 CGAGTTGCAGACTACAATCCGGACT-ACGATACACTTTCTGGGATTAGCTCCCCCTCGCG 60
||||||||| || | ||||| ||| | ||| ||| |||| ||||||| ||||||||
Sbjct 158 CGAGTTGCAACCTGCCATCCGAACTGAGGATGGGTTTT-TGGGGTTAGCTCACCCTCGCG 100
Query 61 GGTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCA 120
|| | ||| |||| ||| | ||| |||| ||||||| |||| |||||||| ||
Sbjct 99 GGATCGCGACCCTTTGTCTCGGCCACTGTAGCACGTGTGTCGCCCAGGGCATAAGGGGCA 40
Query 121 TGAGGACTTGACGTCATCCCCACCTTCCTCCGGTTTGTC 159
||| ||||||||||||||| ||||||||||||| || ||
Sbjct 39 TGATGACTTGACGTCATCCTCACCTTCCTCCGGCTTATC 1
>seq12963
Length=10555
Score = 118 bits (130), Expect = 9e-25
Identities = 123/160 (77%), Gaps = 1/160 (1%)
Strand=Plus/Plus
Query 2 CGAGTTGCAGACTACAATCCGGACTACGATACACTTTCTGGGATTAGCTCCCCCTCGCGG 61
||||||||||| |||||||| ||| | | |||||||| ||| ||||| ||| |
Sbjct 5119 CGAGTTGCAGAGAACAATCCGAACTGAGGCAATCTTTCTGG-ATTCGCTCCGCCTTAAAG 5177
Query 62 GTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCAT 121
| || ||| |||| | |||||||| ||||||| |||| ||||| ||||||||
Sbjct 5178 CCTTGCTTCCCATTGTAATTGCCATTGTAGCACGTGTGTGGCCCAGCCCATTAGGGCCAT 5237
Query 122 GAGGACTTGACGTCATCCCCACCTTCCTCCGGTTTGTCAC 161
| |||||||||||||||||||||||||||| || | ||||
Sbjct 5238 GCGGACTTGACGTCATCCCCACCTTCCTCCAGTATTTCAC 5277
>seq10783
Length=12934
Score = 113 bits (124), Expect = 4e-23
Identities = 121/160 (76%), Gaps = 0/160 (0%)
Strand=Plus/Minus
Query 2 CGAGTTGCAGACTACAATCCGGACTACGATACACTTTCTGGGATTAGCTCCCCCTCGCGG 61
|||||| ||| || ||||||| ||| | | ||| |||| ||||||| |||| ||||
Sbjct 12114 CGAGTTACAGCCTGCAATCCGAACTGAGGACGAGTTTTTGGGGTTAGCTCACCCTTGCGG 12055
Query 62 GTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCAT 121
| | ||| |||| ||| |||||||| ||||||| ||| |||||||| |||
Sbjct 12054 GATCGCGACCCTTTGTCCCGGCCATTGTAGCACGTGTGTCGCCTAGGGCATAAGGGGCAT 11995
Query 122 GAGGACTTGACGTCATCCCCACCTTCCTCCGGTTTGTCAC 161
|| ||||||| ||||||| ||||||||||||| || ||||
Sbjct 11994 GATGACTTGATGTCATCCTCACCTTCCTCCGGCTTATCAC 11955
>seq581
Length=60244
Score = 111 bits (122), Expect = 1e-22
Identities = 100/126 (79%), Gaps = 0/126 (0%)
Strand=Plus/Minus
Query 36 TTTCTGGGATTAGCTCCCCCTCGCGGGTTGGCGGCCCTCTGTATGTACCATTGTATGACG 95
||| |||| ||||||| ||||||||| | ||| |||| ||| |||||||| |||
Sbjct 14632 TTTTTGGGGTTAGCTCAACCTCGCGGGATCGCGACCCTTTGTCCCGGCCATTGTAGCACG 14573
Query 96 TGTGAAGCCCTACCCATAAGGGCCATGAGGACTTGACGTCATCCCCACCTTCCTCCGGTT 155
|||| |||| |||||||| ||||| ||||||||||||||| ||||||||||||| |
Sbjct 14572 TGTGTCGCCCAGGGCATAAGGGGCATGATGACTTGACGTCATCCTCACCTTCCTCCGGCT 14513
Query 156 TGTCAC 161
| ||||
Sbjct 14512 TATCAC 14507
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 415815647650
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |