Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ensete_20ventricosum_20[genbank_20GCA_5F000818735.2_202015-11-23] 45,745 sequences; 451,284,018 total letters Query= AAMG01001821.1 Length=161 Score E Sequences producing significant alignments: (Bits) Value seq10617 127 2e-27 seq8764 127 2e-27 seq3783 127 2e-27 seq22908 118 9e-25 seq12963 118 9e-25 seq10783 113 4e-23 seq581 111 1e-22 >seq10617 Length=13118 Score = 127 bits (140), Expect = 2e-27 Identities = 124/160 (78%), Gaps = 0/160 (0%) Strand=Plus/Minus Query 2 CGAGTTGCAGACTACAATCCGGACTACGATACACTTTCTGGGATTAGCTCCCCCTCGCGG 61 |||||||||| || ||||||| ||| | ||| |||| ||||||| ||||||||| Sbjct 2705 CGAGTTGCAGCCTGCAATCCGAACTGAGGACGGGTTTTTGGGGTTAGCTCACCCTCGCGG 2646 Query 62 GTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCAT 121 | | ||| |||| ||| |||||||| ||||||| |||| |||||||| ||| Sbjct 2645 GATCGCGACCCTTTGTCCCGGCCATTGTAGCACGTGTGTCGCCCAGGGCATAAGGGGCAT 2586 Query 122 GAGGACTTGACGTCATCCCCACCTTCCTCCGGTTTGTCAC 161 || ||||||||||||||| ||||||||||||| || |||| Sbjct 2585 GATGACTTGACGTCATCCTCACCTTCCTCCGGCTTATCAC 2546 >seq8764 Length=15651 Score = 127 bits (140), Expect = 2e-27 Identities = 124/160 (78%), Gaps = 0/160 (0%) Strand=Plus/Minus Query 2 CGAGTTGCAGACTACAATCCGGACTACGATACACTTTCTGGGATTAGCTCCCCCTCGCGG 61 |||||||||| || ||||||| ||| | ||| |||| ||||||| ||||||||| Sbjct 3334 CGAGTTGCAGCCTGCAATCCGAACTGAGGACGGGTTTTTGGGGTTAGCTCACCCTCGCGG 3275 Query 62 GTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCAT 121 | | ||| |||| ||| |||||||| ||||||| |||| |||||||| ||| Sbjct 3274 GATCGCGACCCTTTGTCCCGGCCATTGTAGCACGTGTGTCGCCCAGGGCATAAGGGGCAT 3215 Query 122 GAGGACTTGACGTCATCCCCACCTTCCTCCGGTTTGTCAC 161 || ||||||||||||||| ||||||||||||| || |||| Sbjct 3214 GATGACTTGACGTCATCCTCACCTTCCTCCGGCTTATCAC 3175 >seq3783 Length=28200 Score = 127 bits (140), Expect = 2e-27 Identities = 124/160 (78%), Gaps = 0/160 (0%) Strand=Plus/Minus Query 2 CGAGTTGCAGACTACAATCCGGACTACGATACACTTTCTGGGATTAGCTCCCCCTCGCGG 61 |||||||||| || ||||||| ||| | ||| |||| ||||||| ||||||||| Sbjct 19754 CGAGTTGCAGCCTGCAATCCGAACTGAGGACGGGTTTTTGGGGTTAGCTCACCCTCGCGG 19695 Query 62 GTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCAT 121 | | ||| |||| ||| |||||||| ||||||| |||| |||||||| ||| Sbjct 19694 GATCGCGACCCTTTGTCCCGGCCATTGTAGCACGTGTGTCGCCCAGGGCATAAGGGGCAT 19635 Query 122 GAGGACTTGACGTCATCCCCACCTTCCTCCGGTTTGTCAC 161 || ||||||||||||||| ||||||||||||| || |||| Sbjct 19634 GATGACTTGACGTCATCCTCACCTTCCTCCGGCTTATCAC 19595 >seq22908 Length=4503 Score = 118 bits (130), Expect = 9e-25 Identities = 123/159 (77%), Gaps = 2/159 (1%) Strand=Plus/Minus Query 2 CGAGTTGCAGACTACAATCCGGACT-ACGATACACTTTCTGGGATTAGCTCCCCCTCGCG 60 ||||||||| || | ||||| ||| | ||| ||| |||| ||||||| |||||||| Sbjct 158 CGAGTTGCAACCTGCCATCCGAACTGAGGATGGGTTTT-TGGGGTTAGCTCACCCTCGCG 100 Query 61 GGTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCA 120 || | ||| |||| ||| | ||| |||| ||||||| |||| |||||||| || Sbjct 99 GGATCGCGACCCTTTGTCTCGGCCACTGTAGCACGTGTGTCGCCCAGGGCATAAGGGGCA 40 Query 121 TGAGGACTTGACGTCATCCCCACCTTCCTCCGGTTTGTC 159 ||| ||||||||||||||| ||||||||||||| || || Sbjct 39 TGATGACTTGACGTCATCCTCACCTTCCTCCGGCTTATC 1 >seq12963 Length=10555 Score = 118 bits (130), Expect = 9e-25 Identities = 123/160 (77%), Gaps = 1/160 (1%) Strand=Plus/Plus Query 2 CGAGTTGCAGACTACAATCCGGACTACGATACACTTTCTGGGATTAGCTCCCCCTCGCGG 61 ||||||||||| |||||||| ||| | | |||||||| ||| ||||| ||| | Sbjct 5119 CGAGTTGCAGAGAACAATCCGAACTGAGGCAATCTTTCTGG-ATTCGCTCCGCCTTAAAG 5177 Query 62 GTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCAT 121 | || ||| |||| | |||||||| ||||||| |||| ||||| |||||||| Sbjct 5178 CCTTGCTTCCCATTGTAATTGCCATTGTAGCACGTGTGTGGCCCAGCCCATTAGGGCCAT 5237 Query 122 GAGGACTTGACGTCATCCCCACCTTCCTCCGGTTTGTCAC 161 | |||||||||||||||||||||||||||| || | |||| Sbjct 5238 GCGGACTTGACGTCATCCCCACCTTCCTCCAGTATTTCAC 5277 >seq10783 Length=12934 Score = 113 bits (124), Expect = 4e-23 Identities = 121/160 (76%), Gaps = 0/160 (0%) Strand=Plus/Minus Query 2 CGAGTTGCAGACTACAATCCGGACTACGATACACTTTCTGGGATTAGCTCCCCCTCGCGG 61 |||||| ||| || ||||||| ||| | | ||| |||| ||||||| |||| |||| Sbjct 12114 CGAGTTACAGCCTGCAATCCGAACTGAGGACGAGTTTTTGGGGTTAGCTCACCCTTGCGG 12055 Query 62 GTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCAT 121 | | ||| |||| ||| |||||||| ||||||| ||| |||||||| ||| Sbjct 12054 GATCGCGACCCTTTGTCCCGGCCATTGTAGCACGTGTGTCGCCTAGGGCATAAGGGGCAT 11995 Query 122 GAGGACTTGACGTCATCCCCACCTTCCTCCGGTTTGTCAC 161 || ||||||| ||||||| ||||||||||||| || |||| Sbjct 11994 GATGACTTGATGTCATCCTCACCTTCCTCCGGCTTATCAC 11955 >seq581 Length=60244 Score = 111 bits (122), Expect = 1e-22 Identities = 100/126 (79%), Gaps = 0/126 (0%) Strand=Plus/Minus Query 36 TTTCTGGGATTAGCTCCCCCTCGCGGGTTGGCGGCCCTCTGTATGTACCATTGTATGACG 95 ||| |||| ||||||| ||||||||| | ||| |||| ||| |||||||| ||| Sbjct 14632 TTTTTGGGGTTAGCTCAACCTCGCGGGATCGCGACCCTTTGTCCCGGCCATTGTAGCACG 14573 Query 96 TGTGAAGCCCTACCCATAAGGGCCATGAGGACTTGACGTCATCCCCACCTTCCTCCGGTT 155 |||| |||| |||||||| ||||| ||||||||||||||| ||||||||||||| | Sbjct 14572 TGTGTCGCCCAGGGCATAAGGGGCATGATGACTTGACGTCATCCTCACCTTCCTCCGGCT 14513 Query 156 TGTCAC 161 | |||| Sbjct 14512 TATCAC 14507 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 415815647650