Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ensete_20ventricosum_20[genbank_20GCA_5F000818735.2_202015-11-23] 45,745 sequences; 451,284,018 total letters Query= AAMG01001962.1 Length=275 Score E Sequences producing significant alignments: (Bits) Value seq20979 262 6e-68 seq10492 262 6e-68 seq731 262 6e-68 seq15655 230 4e-58 seq519 190 3e-46 seq54 105 1e-20 seq39461 104 4e-20 seq28401 96.9 5e-18 seq24144 75.2 2e-11 >seq20979 Length=5273 Score = 262 bits (290), Expect = 6e-68 Identities = 224/275 (81%), Gaps = 1/275 (0%) Strand=Plus/Minus Query 2 GAGGAGGGCTTCGGGCTTAGATGCCTTCAGCTCTTATCCCTTCCAAACTTAGCTTCCCAG 61 |||| |||||| ||||||||| |||||| |||||| ||| |||| ||| ||||| Sbjct 2908 GAGGTGGGCTTGCTACTTAGATGCTTTCAGCAGTTATCCGCTCCGCACTTGGCTACCCAG 2849 Query 62 C-TATGCACTTGGCAGTACAACTGGTGCACCAGAGGTTTGTCCATCCCGGTCCTCTCGTA 120 | | | | | |||| | ||||||| |||||||||| |||| |||| ||||||||||| Sbjct 2848 CGTTTACCGTGGGCACGATAACTGGTACACCAGAGGTGCGTCCTTCCCAGTCCTCTCGTA 2789 Query 121 CTAAGGACAGCTCCTCTCAAATTTCCTACGCCCACGACGGATAGGGACCGAACTGTCTCG 180 ||| ||| || ||||||||| || |||||| | |||||| ||||||||||||||| Sbjct 2788 CTAGGGAAAGGTCCTCTCAATGCTCTAACGCCCGCACCGGATATGGACCGAACTGTCTCA 2729 Query 181 CGACGTTCTGAACCCAGCTCGCGTGCCTCTTTAATGGGCGAACAGCCCAACCCTTGGGAC 240 |||||||||||||||||||| ||| || ||||||||||||||||||||||||||||| || Sbjct 2728 CGACGTTCTGAACCCAGCTCACGTACCGCTTTAATGGGCGAACAGCCCAACCCTTGGAAC 2669 Query 241 CTACTTCAGCCCCAGGATGAGACGAGCCGACATCG 275 |||| |||||||||| | || |||||||||||| Sbjct 2668 ATACTACAGCCCCAGGTGGCGAAGAGCCGACATCG 2634 >seq10492 Length=13276 Score = 262 bits (290), Expect = 6e-68 Identities = 224/275 (81%), Gaps = 1/275 (0%) Strand=Plus/Minus Query 2 GAGGAGGGCTTCGGGCTTAGATGCCTTCAGCTCTTATCCCTTCCAAACTTAGCTTCCCAG 61 |||| |||||| ||||||||| |||||| |||||| ||| |||| ||| ||||| Sbjct 10911 GAGGTGGGCTTGCTACTTAGATGCTTTCAGCAGTTATCCGCTCCGCACTTGGCTACCCAG 10852 Query 62 C-TATGCACTTGGCAGTACAACTGGTGCACCAGAGGTTTGTCCATCCCGGTCCTCTCGTA 120 | | | | | |||| | ||||||| |||||||||| |||| |||| ||||||||||| Sbjct 10851 CGTTTACCGTGGGCACGATAACTGGTACACCAGAGGTGCGTCCTTCCCAGTCCTCTCGTA 10792 Query 121 CTAAGGACAGCTCCTCTCAAATTTCCTACGCCCACGACGGATAGGGACCGAACTGTCTCG 180 ||| ||| || ||||||||| || |||||| | |||||| ||||||||||||||| Sbjct 10791 CTAGGGAAAGGTCCTCTCAATGCTCTAACGCCCGCACCGGATATGGACCGAACTGTCTCA 10732 Query 181 CGACGTTCTGAACCCAGCTCGCGTGCCTCTTTAATGGGCGAACAGCCCAACCCTTGGGAC 240 |||||||||||||||||||| ||| || ||||||||||||||||||||||||||||| || Sbjct 10731 CGACGTTCTGAACCCAGCTCACGTACCGCTTTAATGGGCGAACAGCCCAACCCTTGGAAC 10672 Query 241 CTACTTCAGCCCCAGGATGAGACGAGCCGACATCG 275 |||| |||||||||| | || |||||||||||| Sbjct 10671 ATACTACAGCCCCAGGTGGCGAAGAGCCGACATCG 10637 >seq731 Length=56363 Score = 262 bits (290), Expect = 6e-68 Identities = 224/275 (81%), Gaps = 1/275 (0%) Strand=Plus/Minus Query 2 GAGGAGGGCTTCGGGCTTAGATGCCTTCAGCTCTTATCCCTTCCAAACTTAGCTTCCCAG 61 |||| |||||| ||||||||| |||||| |||||| ||| |||| ||| ||||| Sbjct 43025 GAGGTGGGCTTGCTACTTAGATGCTTTCAGCAGTTATCCGCTCCGCACTTGGCTACCCAG 42966 Query 62 C-TATGCACTTGGCAGTACAACTGGTGCACCAGAGGTTTGTCCATCCCGGTCCTCTCGTA 120 | | | | | |||| | ||||||| |||||||||| |||| |||| ||||||||||| Sbjct 42965 CGTTTACCGTGGGCACGATAACTGGTACACCAGAGGTGCGTCCTTCCCAGTCCTCTCGTA 42906 Query 121 CTAAGGACAGCTCCTCTCAAATTTCCTACGCCCACGACGGATAGGGACCGAACTGTCTCG 180 ||| ||| || ||||||||| || |||||| | |||||| ||||||||||||||| Sbjct 42905 CTAGGGAAAGGTCCTCTCAATGCTCTAACGCCCGCACCGGATATGGACCGAACTGTCTCA 42846 Query 181 CGACGTTCTGAACCCAGCTCGCGTGCCTCTTTAATGGGCGAACAGCCCAACCCTTGGGAC 240 |||||||||||||||||||| ||| || ||||||||||||||||||||||||||||| || Sbjct 42845 CGACGTTCTGAACCCAGCTCACGTACCGCTTTAATGGGCGAACAGCCCAACCCTTGGAAC 42786 Query 241 CTACTTCAGCCCCAGGATGAGACGAGCCGACATCG 275 |||| |||||||||| | || |||||||||||| Sbjct 42785 ATACTACAGCCCCAGGTGGCGAAGAGCCGACATCG 42751 >seq15655 Length=8305 Score = 230 bits (254), Expect = 4e-58 Identities = 216/274 (79%), Gaps = 1/274 (0%) Strand=Plus/Minus Query 2 GAGGAGGGCTTCGGGCTTAGATGCCTTCAGCTCTTATCCCTTCCAAACTTAGCTTCCCAG 61 |||| |||||| ||||||||| |||||| || ||| || |||| ||| |||| Sbjct 5940 GAGGTGGGCTTGCTACTTAGATGCTTTCAGCAGTTGTCCGCTCTGCACTTGGCTACCCAT 5881 Query 62 C-TATGCACTTGGCAGTACAACTGGTGCACCAGAGGTTTGTCCATCCCGGTCCTCTCGTA 120 | | | | | |||| | ||||||| |||||||||| ||||| ||| ||||||||||| Sbjct 5880 CGTTTACCGTGGGCACGATAACTGGTACACCAGAGGTGTGTCCTTCCTAGTCCTCTCGTA 5821 Query 121 CTAAGGACAGCTCCTCTCAAATTTCCTACGCCCACGACGGATAGGGACCGAACTGTCTCG 180 ||| ||| || ||||||||| || |||||| | | |||| ||||||||||||||| Sbjct 5820 CTAGGGAAAGGTCCTCTCAATGCTCTAACGCCCGCACCAGATATGGACCGAACTGTCTCA 5761 Query 181 CGACGTTCTGAACCCAGCTCGCGTGCCTCTTTAATGGGCGAACAGCCCAACCCTTGGGAC 240 |||||||||||||||||||| ||| || ||||||||||||||||||||||||||||| || Sbjct 5760 CGACGTTCTGAACCCAGCTCACGTACCGCTTTAATGGGCGAACAGCCCAACCCTTGGAAC 5701 Query 241 CTACTTCAGCCCCAGGATGAGACGAGCCGACATC 274 |||| || |||||| | | ||||||||||| Sbjct 5700 ATACTACAACCCCAGATGGCAAAGAGCCGACATC 5667 >seq519 Length=62486 Score = 190 bits (210), Expect = 3e-46 Identities = 182/233 (78%), Gaps = 4/233 (2%) Strand=Plus/Plus Query 47 AACTTAGCTTCCCAGCTATGCACTTGGCAGTACAACTGGTGCACCAGAGGTTTGTCCATC 106 ||||||||| ||| || ||| |||||| ||||| ||| ||||| ||||| ||| Sbjct 50744 AACTTAGCTGCCCGGCGCTGCTATTGGCATAACAACCGGTACACCATAGGTTGACCCAAT 50803 Query 107 CCGGTCCTCTCGTACTAAGGACAGCTCCTCTCAAATTTCCT----ACGCCCACGACGGAT 162 || |||||||||||||| || ||||||| || | ||| || || ||| ||| Sbjct 50804 CCAGTCCTCTCGTACTAGGGTTGGCTCCTCGCAGTTATCCCTTTAACACCAACGGTAGAT 50863 Query 163 AGGGACCGAACTGTCTCGCGACGTTCTGAACCCAGCTCGCGTGCCTCTTTAATGGGCGAA 222 ||| ||||||||||||| ||||||||| |||||| ||| ||| || |||| || |||||| Sbjct 50864 AGGAACCGAACTGTCTCACGACGTTCTAAACCCAACTCACGTACCACTTTGATCGGCGAA 50923 Query 223 CAGCCCAACCCTTGGGACCTACTTCAGCCCCAGGATGAGACGAGCCGACATCG 275 || || |||||||||||||| ||||| |||||||||| || ||| |||||||| Sbjct 50924 CAACCGAACCCTTGGGACCTTCTTCAACCCCAGGATGTGATGAGTCGACATCG 50976 >seq54 Length=105501 Score = 105 bits (116), Expect = 1e-20 Identities = 116/153 (76%), Gaps = 1/153 (1%) Strand=Plus/Minus Query 2 GAGGAGGGCTTCGGGCTTAGATGCCTTCAGCTCTTATCCCTTCCAAACTTAGCTTCCCAG 61 |||| |||||| ||||||||| ||||| |||||| ||| |||| ||| ||||| Sbjct 103078 GAGGTGGGCTTGCTACTTAGATGCTTTCAGTAGTTATCCGCTCCGCACTTGGCTACCCAG 103019 Query 62 C-TATGCACTTGGCAGTACAACTGGTGCACCAGAGGTTTGTCCATCCCGGTCCTCTCGTA 120 | | | | | |||| | ||||||| |||||||||| |||| |||| ||||||||||| Sbjct 103018 CGTTTACCGTGGGCACGATAACTGGTACACCAGAGGTGCGTCCTTCCCAGTCCTCTCGTA 102959 Query 121 CTAAGGACAGCTCCTCTCAAATTTCCTACGCCC 153 ||| ||| || ||||||||| || |||||| Sbjct 102958 CTAGGGAAAGGTCCTCTCAATGCTCTAACGCCC 102926 >seq39461 Length=1482 Score = 104 bits (114), Expect = 4e-20 Identities = 96/122 (79%), Gaps = 0/122 (0%) Strand=Plus/Minus Query 2 GAGGAGGGCTTCGGGCTTAGATGCCTTCAGCTCTTATCCCTTCCAAACTTAGCTTCCCAG 61 |||| ||| ||| |||||||||| |||||| ||||||| ||| || ||||| ||| | Sbjct 124 GAGGTGGGTTTCCCGCTTAGATGCATTCAGCGGTTATCCCGTCCGTACATAGCTACCCTG 65 Query 62 CTATGCACTTGGCAGTACAACTGGTGCACCAGAGGTTTGTCCATCCCGGTCCTCTCGTAC 121 | ||| |||| ||||| ||| |||||||||| || ||||||||||||||||||| Sbjct 64 CACTGCGGCTGGCGCCACAACAGGTCCACCAGAGGTACGTTCATCCCGGTCCTCTCGTAC 5 Query 122 TA 123 || Sbjct 4 TA 3 >seq28401 Length=2978 Score = 96.9 bits (106), Expect = 5e-18 Identities = 114/153 (75%), Gaps = 1/153 (1%) Strand=Plus/Minus Query 2 GAGGAGGGCTTCGGGCTTAGATGCCTTCAGCTCTTATCCCTTCCAAACTTAGCTTCCCAG 61 |||| |||||| ||||||||| |||||| |||||| ||| |||| || ||||| Sbjct 161 GAGGTGGGCTTGCTACTTAGATGCTTTCAGCAATTATCCGCTCCGCACTTGACTACCCAG 102 Query 62 C-TATGCACTTGGCAGTACAACTGGTGCACCAGAGGTTTGTCCATCCCGGTCCTCTCGTA 120 | | | | | ||||| | |||| || ||||| || | |||| |||| ||||||||||| Sbjct 101 CGTTTACCGTAGGCAGGATAACTCGTACACCAAAGATACGTCCTTCCCAGTCCTCTCGTA 42 Query 121 CTAAGGACAGCTCCTCTCAAATTTCCTACGCCC 153 ||| ||| || ||||||||| || |||||| Sbjct 41 CTAGGGAAAGGTCCTCTCAATGCTCTAACGCCC 9 >seq24144 Length=4094 Score = 75.2 bits (82), Expect = 2e-11 Identities = 93/126 (74%), Gaps = 1/126 (1%) Strand=Plus/Plus Query 29 CAGCTCTTATCCCTTCCAAACTTAGCTTCCCAGC-TATGCACTTGGCAGTACAACTGGTG 87 |||| |||||| ||| |||| || |||||| | | | | ||||| | |||| || Sbjct 1 CAGCAATTATCCGCTCCGCACTTGACTACCCAGCGTTTACCGTAGGCAGGATAACTCGTA 60 Query 88 CACCAGAGGTTTGTCCATCCCGGTCCTCTCGTACTAAGGACAGCTCCTCTCAAATTTCCT 147 ||||| || | |||| |||| |||||||||||||| ||| || ||||||||| || Sbjct 61 CACCAAAGATACGTCCTTCCCAGTCCTCTCGTACTAGGGAAAGGTCCTCTCAATGCTCTA 120 Query 148 ACGCCC 153 |||||| Sbjct 121 ACGCCC 126 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 780453984820