Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ensete_20ventricosum_20[genbank_20GCA_5F000818735.2_202015-11-23] 45,745 sequences; 451,284,018 total letters Query= AAMG01002055.1 Length=294 Score E Sequences producing significant alignments: (Bits) Value seq29180 95.1 2e-17 seq1072 86.0 1e-14 >seq29180 Length=2820 Score = 95.1 bits (104), Expect = 2e-17 Identities = 140/197 (71%), Gaps = 1/197 (1%) Strand=Plus/Minus Query 90 AGCACCGCAAGGAAGGCTTCTTAGTGGAATTTCCACGTTGCCCACTCGCTTCATGCGTTT 149 ||| |||| | ||||||||| | | || ||||| || ||||| | | | ||| || Sbjct 2380 AGCGCCGCGATGAAGGCTTCCT-GCGGGATTTCGACCTTGCCGAATTGGCGCATCTTCTT 2322 Query 150 TTTACCGGCCTTTTGCTTCTCAAGCAGCTTGCGCTTACGGCTTACGTCACCGCCGTAGCA 209 || |||||||| ||||| || || ||||||||||| ||| | |||| ||||| ||||| Sbjct 2321 CTTGCCGGCCTTCTGCTTTTCGAGAAGCTTGCGCTTGCGGGTGGCGTCGCCGCCATAGCA 2262 Query 210 TTTGGCCAGTACGTTCTTTCTGAGAGCCTTGACGGAGGTCCGCGCAATGATCTGCCCGCC 269 ||||||| |||| ||| | | || || | || || ||||||| ||||| Sbjct 2261 TTTGGCCGTCACGTCCTTGCGCAAGGCGCGCACCGTCTCGCGGGCGATGATCTTGCCGCC 2202 Query 270 AATGGCGGCCTGGATCG 286 || || |||||||||| Sbjct 2201 GATCGCCGCCTGGATCG 2185 >seq1072 Length=48757 Score = 86.0 bits (94), Expect = 1e-14 Identities = 100/134 (75%), Gaps = 1/134 (1%) Strand=Plus/Plus Query 97 CAAGGAAGGCTTCTTAGTGGAATTTCCACGTTGCCCACTCGCTTCATGCGTTTTTTACCG 156 || |||| ||||| | |||| || ||||| ||||| ||||||||||| || || || Sbjct 37524 CATGGAATGCTTCCT-GTGGTATGTCCACAGATCCCACACGCTTCATGCGCTTCTTCCCT 37582 Query 157 GCCTTTTGCTTCTCAAGCAGCTTGCGCTTACGGCTTACGTCACCGCCGTAGCATTTGGCC 216 |||| |||||||| | ||||| |||||| | || || || || |||||||| || Sbjct 37583 TCCTTCTGCTTCTCTAATAGCTTCTTCTTACGAGTAACATCGCCACCATAGCATTTTGCT 37642 Query 217 AGTACGTTCTTTCT 230 || || |||||||| Sbjct 37643 AGGACATTCTTTCT 37656 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 838016473920