Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ensete_20ventricosum_20[genbank_20GCA_5F000818735.2_202015-11-23]
45,745 sequences; 451,284,018 total letters
Query= AAMG01002055.1
Length=294
Score E
Sequences producing significant alignments: (Bits) Value
seq29180 95.1 2e-17
seq1072 86.0 1e-14
>seq29180
Length=2820
Score = 95.1 bits (104), Expect = 2e-17
Identities = 140/197 (71%), Gaps = 1/197 (1%)
Strand=Plus/Minus
Query 90 AGCACCGCAAGGAAGGCTTCTTAGTGGAATTTCCACGTTGCCCACTCGCTTCATGCGTTT 149
||| |||| | ||||||||| | | || ||||| || ||||| | | | ||| ||
Sbjct 2380 AGCGCCGCGATGAAGGCTTCCT-GCGGGATTTCGACCTTGCCGAATTGGCGCATCTTCTT 2322
Query 150 TTTACCGGCCTTTTGCTTCTCAAGCAGCTTGCGCTTACGGCTTACGTCACCGCCGTAGCA 209
|| |||||||| ||||| || || ||||||||||| ||| | |||| ||||| |||||
Sbjct 2321 CTTGCCGGCCTTCTGCTTTTCGAGAAGCTTGCGCTTGCGGGTGGCGTCGCCGCCATAGCA 2262
Query 210 TTTGGCCAGTACGTTCTTTCTGAGAGCCTTGACGGAGGTCCGCGCAATGATCTGCCCGCC 269
||||||| |||| ||| | | || || | || || ||||||| |||||
Sbjct 2261 TTTGGCCGTCACGTCCTTGCGCAAGGCGCGCACCGTCTCGCGGGCGATGATCTTGCCGCC 2202
Query 270 AATGGCGGCCTGGATCG 286
|| || ||||||||||
Sbjct 2201 GATCGCCGCCTGGATCG 2185
>seq1072
Length=48757
Score = 86.0 bits (94), Expect = 1e-14
Identities = 100/134 (75%), Gaps = 1/134 (1%)
Strand=Plus/Plus
Query 97 CAAGGAAGGCTTCTTAGTGGAATTTCCACGTTGCCCACTCGCTTCATGCGTTTTTTACCG 156
|| |||| ||||| | |||| || ||||| ||||| ||||||||||| || || ||
Sbjct 37524 CATGGAATGCTTCCT-GTGGTATGTCCACAGATCCCACACGCTTCATGCGCTTCTTCCCT 37582
Query 157 GCCTTTTGCTTCTCAAGCAGCTTGCGCTTACGGCTTACGTCACCGCCGTAGCATTTGGCC 216
|||| |||||||| | ||||| |||||| | || || || || |||||||| ||
Sbjct 37583 TCCTTCTGCTTCTCTAATAGCTTCTTCTTACGAGTAACATCGCCACCATAGCATTTTGCT 37642
Query 217 AGTACGTTCTTTCT 230
|| || ||||||||
Sbjct 37643 AGGACATTCTTTCT 37656
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 838016473920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |