Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ensete_20ventricosum_20[genbank_20GCA_5F000818735.2_202015-11-23] 45,745 sequences; 451,284,018 total letters Query= AAMG01002193.1 Length=560 Score E Sequences producing significant alignments: (Bits) Value seq20979 187 8e-45 seq519 170 6e-40 seq731 125 2e-26 seq9901 107 6e-21 seq10983 93.3 1e-16 seq11995 84.2 7e-14 >seq20979 Length=5273 Score = 187 bits (206), Expect = 8e-45 Identities = 398/586 (68%), Gaps = 44/586 (8%) Strand=Plus/Plus Query 2 CGAGTCCGAACAGGGCGACAGTCGCTGGGTGTAGACCCGAAACCAAGTGATCTACCCATG 61 |||||| | ||||||| ||| ||| | | |||||||| | |||||||| ||||| Sbjct 762 CGAGTCTTCATAGGGCGATTGTCACTGCTTATGGACCCGAACCTGGGTGATCTATCCATG 821 Query 62 GCCAGGATGAAGGTGCGGTAACACGCCCTGGAGGTCCGAACCCACTAATGTTGAAAAATT 121 ||||||||||| | ||| | || |||||||||||||| ||| |||||||| ||| Sbjct 822 ACCAGGATGAAGCTTGGGTGAAACTAAGTGGAGGTCCGAACCGACTGATGTTGAAGAATC 881 Query 122 AGGGGATGAGCTGTGGGTAGGGGTGAAAGGCTAAACAAACTTGGAAATAGCTGGTTCTCT 181 || ||||||| ||||| ||||||||||| || | | ||| || |||||||||||| Sbjct 882 AGCGGATGAGTTGTGGTTAGGGGTGAAATGCCACTCGAACCCAGAGCTAGCTGGTTCTCC 941 Query 182 CCGAAAACTATTTAGGTAGTGCCTCAAGTATCAC----CATC-GGGGGTAGAGCACTGTT 236 |||||| || ||| || ||| | || |||| |||||| ||||||||| Sbjct 942 CCGAAATGCGTTGAGGCGCAGC----AGT-TGACTGGACATCTAGGGGTAAAGCACTGTT 996 Query 237 ATGGCTAGGG-GGTCATTGCGACTTACCAAACCATTGCAAACTCCGAATGCGCATCAGTT 295 || ||| | | ||| ||||||| | |||||||| |||| | | | Sbjct 997 TCGGTGCGGGCCGCGAGAGCG--GTACCAAATCGAGGCAAACTCTGAATAC---TAGATA 1051 Query 296 TTACC---------GCGGG-------------AGTGAGGGCATGGGTGCTAAGGTCCGTG 333 | ||| | ||| |||||| ||||| | |||| | | | Sbjct 1052 TGACCCCAAAATAAGAGGGATCAAGGTCGGCCAGTGAGACGATGGGGGATAAGCTTCATC 1111 Query 334 CCCGAGAGGAGAAGAATCCGGACTATCAGCTAAGGCCCCGAAATGACAGCTAAGTTAAAC 393 ||||||| || | ||||| | ||||||||||||| ||||||| ||| ||| | | Sbjct 1112 GTCGAGAGGGAAACAGCCCGGATCACCAGCTAAGGCCCCTAAATGACCGCTCAGTGATA- 1170 Query 394 TAACGAAGTCTGATTGCTAAGACAGCTAGGATGTTGGCTTGGAAGCAGCCATTCATTTAA 453 || || || | ||| ||||||| |||| ||| || | |||||||||| | || || Sbjct 1171 -AAGGAGGTAGGGGTGCAGAGACAGCCAGGAGGTTTGCCTAGAAGCAGCCA-CCCTTGAA 1228 Query 454 AGAGTGCGTAACAGCTCACTAGTCGAGGAGTCGGGCGTGGATAATAATCGGGTATTAAGT 513 ||||||||||| |||||||| ||||| || ||| || || | |||| |||| Sbjct 1229 AGAGTGCGTAATAGCTCACTGATCGAGCGCTCTTGCGCCGAAGATGAACGGG-GCTAAGC 1287 Query 514 TGTCTACCGAAGCAGTGGGATCATTTATATG-ATCGGTAGGGGAGC 558 ||| ||||||| ||||||| | | ||| |||||||||||||| Sbjct 1288 GATCTGCCGAAGCTGTGGGAT-GTAAAAATGCATCGGTAGGGGAGC 1332 >seq519 Length=62486 Score = 170 bits (188), Expect = 6e-40 Identities = 317/456 (70%), Gaps = 21/456 (5%) Strand=Plus/Minus Query 35 GACCCGAAACCAAGTGATCTACCCATGGCCAGGATGAAG-GTGCGGTAACACGCCCTGGA 93 ||||||||||| | |||||| ||||| |||| ||||| | || | | ||| |||| Sbjct 52790 GACCCGAAACCGATCGATCTAGCCATGAGCAGGTTGAAGAGAGCTCACAAAGGCCTTGGA 52731 Query 94 GGTCCGAACCCACTAATGTTGAAAAATTAGGGGATGAGCTGTGGGTAGGGGTGAAAGGCT 153 || |||||||||| |||| | ||||| |||||||| ||||| |||||||||||||| Sbjct 52730 GGACCGAACCCACGTATGTGGCAAAATACGGGGATGACTTGTGGCTAGGGGTGAAAGGCC 52671 Query 154 AAACAAACTTGGAAATAGCTGGTTCTCTCCGAAAACTATTTAGGTAGTGCCTCAAGTATC 213 || ||| | ||| |||||||||| || ||||| |||||| |||| || | | || Sbjct 52670 AACCAAGATCGGATATAGCTGGTTTTCCGCGAAATCTATTTCAGTAGAGCGT--ATGATG 52613 Query 214 ACCAT---CGGGGGTAGAGCACTGTTATGGCTAGGGGGTCATTGCGACTTACCAAACCAT 270 | || | | ||||||||||| |||||||| | | || |||||||| || Sbjct 52612 TCGATGGCCCGAGGTAGAGCACTCAATGGGCTAGGGTGGC--CCCGCCTTACCAACCCCA 52555 Query 271 TGCAAACTCCGAAT---GCGCATCA--GTTT-TACCGCGGGAGTGAGGGCATGGGTGCTA 324 | ||||||||||| | ||||| |||| ||| || || | ||||||||| Sbjct 52554 GGGAAACTCCGAATACAGGCCATCATCGTTTGTAC----AGACAGACTTCTTGGGTGCTA 52499 Query 325 AGGTCCGTGCCCGAGAGGAGAAGAATCCGGACTATCAGCTAAGGCCCCGAAATGACAGCT 384 || ||| ||||||| || | || || | ||||||| ||| || | || Sbjct 52498 AGATCCAAAGTCGAGAGGGAAACAGCCCAGATCGTACGCTAAGGTCCCTAAGCAATCACT 52439 Query 385 AAGTTAAACTAACGAAGTCTGATTGCTAAGACAGCTAGGATGTTGGCTTGGAAGCAGCCA 444 ||| || || ||||| || | |||| | |||| || |||||||||||||||| Sbjct 52438 TAGTGGAA--AAGGAAGTTATCGAGCGATGACAACCAGGAGGTGGGCTTGGAAGCAGCCA 52381 Query 445 TTCATTTAAAGAGTGCGTAACAGCTCACTAGTCGAG 480 || ||| |||| |||||| |||||||| ||| || Sbjct 52380 -TCCTTTGAAGAAAGCGTAATAGCTCACTGGTCTAG 52346 >seq731 Length=56363 Score = 125 bits (138), Expect = 2e-26 Identities = 329/494 (67%), Gaps = 36/494 (7%) Strand=Plus/Plus Query 90 TGGAGGTCCGAACCCACTAATGTTGAAAAATTAGGGGATGAGCTGTGGGTAGGGGTGAAA 149 |||||||| ||||| ||| |||||| ||| || ||||||| ||||| ||||||||||| Sbjct 40967 TGGAGGTCTGAACCGACTGTTGTTGATGAATCAGCGGATGAGTTGTGGTTAGGGGTGAAA 41026 Query 150 GGCTAAACAAACTTGGAAATAGCTGGTTCTCTCCGAAAACTATTTAGGTAGTGCCTCAAG 209 || | | ||| || ||| |||||||| |||||| | || ||| || | | Sbjct 41027 TGCCACTCGAACCCAGAGCTAGTTGGTTCTCCCCGAAATGTGTTGAGGC-GTAGCAGTTG 41085 Query 210 TATCACCATCG-GGGGTAGAGCACTGTTA-TGGCTAGGGGGTCATTGCGACTTACCAAAC 267 | |||| |||||| |||||| || || | || || | ||| ||||||| Sbjct 41086 ATTGGACATCTAGGGGTAAAGCACTCTTTCTGTGTGGGCCGTGAGAGCGG--TACCAAAT 41143 Query 268 CATTGCAAACTCCGAATGCGCATCAGTTTTACCGC---------GGGA------------ 306 | |||||||| |||| | | | | ||| | |||| Sbjct 41144 CGAGGCAAACTCTGAATAC---TAGATATGACCCCAAAATAAGAGGGATCAAGGTTGGCC 41200 Query 307 -GTGAGGGCATGGGTGCTAAGGTCCGTGCCCGAGAGGAGAAGAATCCGGACTATCAGCTA 365 ||||| ||||| | |||| | | | ||||||| || | ||||| | |||||| Sbjct 41201 AGTGAGACGATGGGGGATAAGCTTCATCGTCGAGAGGGAAACAGCCCGGATCACCAGCTA 41260 Query 366 AGGCCCCGAAATGACAGCTAAGTTAAACTAACGAAGTCTGATTGCTAAGACAGCTAGGAT 425 ||||||| ||| || ||||||| | | || || || || ||| ||||||| |||| Sbjct 41261 AGGCCCCTAAACGATCGCTAAGTGAGA--AAGGAGGTATGGGTGCAGAGACAGCCAGGAG 41318 Query 426 GTTGGCTTGGAAGCAGCCATTCATTTAAAGAGTGCGTAACAGCTCACTAGTCGAGGAGTC 485 ||| || | |||||||||| | || |||||||| |||| |||||||| ||||| || Sbjct 41319 GTTTGCCTAGAAGCAGCCA-CCCTTGAAAGAGTGTGTAATAGCTCACTGATCGAGCGCTC 41377 Query 486 GGGCGTGGATAATAATCGGGTATTAAGTTGTCTACCGAAGCAGTGGGATCATTTATATG- 544 ||| || || | |||| |||| ||| ||||||| ||||||| | | ||| Sbjct 41378 TTGCGCCGAAGATGAACGGG-GCTAAGCGATCTGCCGAAGCTGTGGGAT-GTAAAAATGC 41435 Query 545 ATCGGTAGGGGAGC 558 |||||||||||||| Sbjct 41436 ATCGGTAGGGGAGC 41449 >seq9901 Length=14021 Score = 107 bits (118), Expect = 6e-21 Identities = 147/199 (74%), Gaps = 6/199 (3%) Strand=Plus/Minus Query 361 AGCTAAGGCCCCGAAATGACAGCTAAGTTAAACTAACGAAGTCTGATTGCTAAGACAGCT 420 |||||||||||| ||||||| ||| ||| | | || || || | ||| ||||||| Sbjct 12367 AGCTAAGGCCCCTAAATGACCGCTCAGTGATA--AAGGAGGTAGGGGTGCAGAGACAGCC 12310 Query 421 AGGATGTTGGCTTGGAAGCAGCCATTCATTTAAAGAGTGCGTAACAGCTCACTAGTCGAG 480 |||| ||| || | |||||||||| | || ||||||||||||| |||||||| ||||| Sbjct 12309 AGGAGGTTTGCCTAGAAGCAGCCACCC-TTGAAAGAGTGCGTAATAGCTCACTGATCGAG 12251 Query 481 GAGTCGGGCGTGGATAATAATCGGGTATTAAGTTGTCTACCGAAGCAGTGGGATCATTTA 540 || ||| || || | |||| |||| ||| ||||||| ||||||| | | Sbjct 12250 CGCTCTTGCGCCGAAGATGAACGGG-GCTAAGCGATCTGCCGAAGCTGTGGGAT-GTAAA 12193 Query 541 TATG-ATCGGTAGGGGAGC 558 ||| |||||||||||||| Sbjct 12192 AATGCATCGGTAGGGGAGC 12174 >seq10983 Length=12702 Score = 93.3 bits (102), Expect = 1e-16 Identities = 109/145 (75%), Gaps = 3/145 (2%) Strand=Plus/Minus Query 336 CGAGAGGAGAAGAATCCGGACTATCAGCTAAGGCCCCGAAATGACAGCTAAGTTAAACTA 395 ||||||| || | ||||| | |||| |||||||| ||||||| ||| ||| | | | Sbjct 10354 CGAGAGGGAAACAGCCCGGATCACCAGCCAAGGCCCCTAAATGACCGCTCAGTGATA--A 10297 Query 396 ACGAAGTCTGATTGCTAAGACAGCTAGGATGTTGGCTTGGAAGCAGCCATTCATTTAAAG 455 | || || | ||| ||||||| |||| ||| || | |||||||||| | || |||| Sbjct 10296 AGGAGGTAGGGGTGCAGAGACAGCCAGGAGGTTTGCCTAGAAGCAGCCACCC-TTGAAAG 10238 Query 456 AGTGCGTAACAGCTCACTAGTCGAG 480 ||||||||| |||||||| ||||| Sbjct 10237 AGTGCGTAATAGCTCACTGATCGAG 10213 >seq11995 Length=11566 Score = 84.2 bits (92), Expect = 7e-14 Identities = 90/119 (76%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 2 CGAGTCCGAACAGGGCGACAGTCGCTGGGTGTAGACCCGAAACCAAGTGATCTACCCATG 61 |||||| | ||||||| ||| ||| | | |||||||| | |||||||| ||||| Sbjct 9 CGAGTCTTCATAGGGCGATTGTCACTGCTTATGGACCCGAACCTGGGTGATCTATCCATG 68 Query 62 GCCAGGATGAAGGTGCGGTAACACGCCCTGGAGGTCCGAACCCACTAATGTTGAAAAAT 120 ||||||||||| | ||| | || |||||||||||||| ||| |||||||| ||| Sbjct 69 ACCAGGATGAAGCTTGGGTGAAACTAAGTGGAGGTCCGAACCGACTGATGTTGAAGAAT 127 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1688827092480