Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ensete_20ventricosum_20[genbank_20GCA_5F000818735.2_202015-11-23]
45,745 sequences; 451,284,018 total letters
Query= AAMG01002193.1
Length=560
Score E
Sequences producing significant alignments: (Bits) Value
seq20979 187 8e-45
seq519 170 6e-40
seq731 125 2e-26
seq9901 107 6e-21
seq10983 93.3 1e-16
seq11995 84.2 7e-14
>seq20979
Length=5273
Score = 187 bits (206), Expect = 8e-45
Identities = 398/586 (68%), Gaps = 44/586 (8%)
Strand=Plus/Plus
Query 2 CGAGTCCGAACAGGGCGACAGTCGCTGGGTGTAGACCCGAAACCAAGTGATCTACCCATG 61
|||||| | ||||||| ||| ||| | | |||||||| | |||||||| |||||
Sbjct 762 CGAGTCTTCATAGGGCGATTGTCACTGCTTATGGACCCGAACCTGGGTGATCTATCCATG 821
Query 62 GCCAGGATGAAGGTGCGGTAACACGCCCTGGAGGTCCGAACCCACTAATGTTGAAAAATT 121
||||||||||| | ||| | || |||||||||||||| ||| |||||||| |||
Sbjct 822 ACCAGGATGAAGCTTGGGTGAAACTAAGTGGAGGTCCGAACCGACTGATGTTGAAGAATC 881
Query 122 AGGGGATGAGCTGTGGGTAGGGGTGAAAGGCTAAACAAACTTGGAAATAGCTGGTTCTCT 181
|| ||||||| ||||| ||||||||||| || | | ||| || ||||||||||||
Sbjct 882 AGCGGATGAGTTGTGGTTAGGGGTGAAATGCCACTCGAACCCAGAGCTAGCTGGTTCTCC 941
Query 182 CCGAAAACTATTTAGGTAGTGCCTCAAGTATCAC----CATC-GGGGGTAGAGCACTGTT 236
|||||| || ||| || ||| | || |||| |||||| |||||||||
Sbjct 942 CCGAAATGCGTTGAGGCGCAGC----AGT-TGACTGGACATCTAGGGGTAAAGCACTGTT 996
Query 237 ATGGCTAGGG-GGTCATTGCGACTTACCAAACCATTGCAAACTCCGAATGCGCATCAGTT 295
|| ||| | | ||| ||||||| | |||||||| |||| | | |
Sbjct 997 TCGGTGCGGGCCGCGAGAGCG--GTACCAAATCGAGGCAAACTCTGAATAC---TAGATA 1051
Query 296 TTACC---------GCGGG-------------AGTGAGGGCATGGGTGCTAAGGTCCGTG 333
| ||| | ||| |||||| ||||| | |||| | | |
Sbjct 1052 TGACCCCAAAATAAGAGGGATCAAGGTCGGCCAGTGAGACGATGGGGGATAAGCTTCATC 1111
Query 334 CCCGAGAGGAGAAGAATCCGGACTATCAGCTAAGGCCCCGAAATGACAGCTAAGTTAAAC 393
||||||| || | ||||| | ||||||||||||| ||||||| ||| ||| | |
Sbjct 1112 GTCGAGAGGGAAACAGCCCGGATCACCAGCTAAGGCCCCTAAATGACCGCTCAGTGATA- 1170
Query 394 TAACGAAGTCTGATTGCTAAGACAGCTAGGATGTTGGCTTGGAAGCAGCCATTCATTTAA 453
|| || || | ||| ||||||| |||| ||| || | |||||||||| | || ||
Sbjct 1171 -AAGGAGGTAGGGGTGCAGAGACAGCCAGGAGGTTTGCCTAGAAGCAGCCA-CCCTTGAA 1228
Query 454 AGAGTGCGTAACAGCTCACTAGTCGAGGAGTCGGGCGTGGATAATAATCGGGTATTAAGT 513
||||||||||| |||||||| ||||| || ||| || || | |||| ||||
Sbjct 1229 AGAGTGCGTAATAGCTCACTGATCGAGCGCTCTTGCGCCGAAGATGAACGGG-GCTAAGC 1287
Query 514 TGTCTACCGAAGCAGTGGGATCATTTATATG-ATCGGTAGGGGAGC 558
||| ||||||| ||||||| | | ||| ||||||||||||||
Sbjct 1288 GATCTGCCGAAGCTGTGGGAT-GTAAAAATGCATCGGTAGGGGAGC 1332
>seq519
Length=62486
Score = 170 bits (188), Expect = 6e-40
Identities = 317/456 (70%), Gaps = 21/456 (5%)
Strand=Plus/Minus
Query 35 GACCCGAAACCAAGTGATCTACCCATGGCCAGGATGAAG-GTGCGGTAACACGCCCTGGA 93
||||||||||| | |||||| ||||| |||| ||||| | || | | ||| ||||
Sbjct 52790 GACCCGAAACCGATCGATCTAGCCATGAGCAGGTTGAAGAGAGCTCACAAAGGCCTTGGA 52731
Query 94 GGTCCGAACCCACTAATGTTGAAAAATTAGGGGATGAGCTGTGGGTAGGGGTGAAAGGCT 153
|| |||||||||| |||| | ||||| |||||||| ||||| ||||||||||||||
Sbjct 52730 GGACCGAACCCACGTATGTGGCAAAATACGGGGATGACTTGTGGCTAGGGGTGAAAGGCC 52671
Query 154 AAACAAACTTGGAAATAGCTGGTTCTCTCCGAAAACTATTTAGGTAGTGCCTCAAGTATC 213
|| ||| | ||| |||||||||| || ||||| |||||| |||| || | | ||
Sbjct 52670 AACCAAGATCGGATATAGCTGGTTTTCCGCGAAATCTATTTCAGTAGAGCGT--ATGATG 52613
Query 214 ACCAT---CGGGGGTAGAGCACTGTTATGGCTAGGGGGTCATTGCGACTTACCAAACCAT 270
| || | | ||||||||||| |||||||| | | || |||||||| ||
Sbjct 52612 TCGATGGCCCGAGGTAGAGCACTCAATGGGCTAGGGTGGC--CCCGCCTTACCAACCCCA 52555
Query 271 TGCAAACTCCGAAT---GCGCATCA--GTTT-TACCGCGGGAGTGAGGGCATGGGTGCTA 324
| ||||||||||| | ||||| |||| ||| || || | |||||||||
Sbjct 52554 GGGAAACTCCGAATACAGGCCATCATCGTTTGTAC----AGACAGACTTCTTGGGTGCTA 52499
Query 325 AGGTCCGTGCCCGAGAGGAGAAGAATCCGGACTATCAGCTAAGGCCCCGAAATGACAGCT 384
|| ||| ||||||| || | || || | ||||||| ||| || | ||
Sbjct 52498 AGATCCAAAGTCGAGAGGGAAACAGCCCAGATCGTACGCTAAGGTCCCTAAGCAATCACT 52439
Query 385 AAGTTAAACTAACGAAGTCTGATTGCTAAGACAGCTAGGATGTTGGCTTGGAAGCAGCCA 444
||| || || ||||| || | |||| | |||| || ||||||||||||||||
Sbjct 52438 TAGTGGAA--AAGGAAGTTATCGAGCGATGACAACCAGGAGGTGGGCTTGGAAGCAGCCA 52381
Query 445 TTCATTTAAAGAGTGCGTAACAGCTCACTAGTCGAG 480
|| ||| |||| |||||| |||||||| ||| ||
Sbjct 52380 -TCCTTTGAAGAAAGCGTAATAGCTCACTGGTCTAG 52346
>seq731
Length=56363
Score = 125 bits (138), Expect = 2e-26
Identities = 329/494 (67%), Gaps = 36/494 (7%)
Strand=Plus/Plus
Query 90 TGGAGGTCCGAACCCACTAATGTTGAAAAATTAGGGGATGAGCTGTGGGTAGGGGTGAAA 149
|||||||| ||||| ||| |||||| ||| || ||||||| ||||| |||||||||||
Sbjct 40967 TGGAGGTCTGAACCGACTGTTGTTGATGAATCAGCGGATGAGTTGTGGTTAGGGGTGAAA 41026
Query 150 GGCTAAACAAACTTGGAAATAGCTGGTTCTCTCCGAAAACTATTTAGGTAGTGCCTCAAG 209
|| | | ||| || ||| |||||||| |||||| | || ||| || | |
Sbjct 41027 TGCCACTCGAACCCAGAGCTAGTTGGTTCTCCCCGAAATGTGTTGAGGC-GTAGCAGTTG 41085
Query 210 TATCACCATCG-GGGGTAGAGCACTGTTA-TGGCTAGGGGGTCATTGCGACTTACCAAAC 267
| |||| |||||| |||||| || || | || || | ||| |||||||
Sbjct 41086 ATTGGACATCTAGGGGTAAAGCACTCTTTCTGTGTGGGCCGTGAGAGCGG--TACCAAAT 41143
Query 268 CATTGCAAACTCCGAATGCGCATCAGTTTTACCGC---------GGGA------------ 306
| |||||||| |||| | | | | ||| | ||||
Sbjct 41144 CGAGGCAAACTCTGAATAC---TAGATATGACCCCAAAATAAGAGGGATCAAGGTTGGCC 41200
Query 307 -GTGAGGGCATGGGTGCTAAGGTCCGTGCCCGAGAGGAGAAGAATCCGGACTATCAGCTA 365
||||| ||||| | |||| | | | ||||||| || | ||||| | ||||||
Sbjct 41201 AGTGAGACGATGGGGGATAAGCTTCATCGTCGAGAGGGAAACAGCCCGGATCACCAGCTA 41260
Query 366 AGGCCCCGAAATGACAGCTAAGTTAAACTAACGAAGTCTGATTGCTAAGACAGCTAGGAT 425
||||||| ||| || ||||||| | | || || || || ||| ||||||| ||||
Sbjct 41261 AGGCCCCTAAACGATCGCTAAGTGAGA--AAGGAGGTATGGGTGCAGAGACAGCCAGGAG 41318
Query 426 GTTGGCTTGGAAGCAGCCATTCATTTAAAGAGTGCGTAACAGCTCACTAGTCGAGGAGTC 485
||| || | |||||||||| | || |||||||| |||| |||||||| ||||| ||
Sbjct 41319 GTTTGCCTAGAAGCAGCCA-CCCTTGAAAGAGTGTGTAATAGCTCACTGATCGAGCGCTC 41377
Query 486 GGGCGTGGATAATAATCGGGTATTAAGTTGTCTACCGAAGCAGTGGGATCATTTATATG- 544
||| || || | |||| |||| ||| ||||||| ||||||| | | |||
Sbjct 41378 TTGCGCCGAAGATGAACGGG-GCTAAGCGATCTGCCGAAGCTGTGGGAT-GTAAAAATGC 41435
Query 545 ATCGGTAGGGGAGC 558
||||||||||||||
Sbjct 41436 ATCGGTAGGGGAGC 41449
>seq9901
Length=14021
Score = 107 bits (118), Expect = 6e-21
Identities = 147/199 (74%), Gaps = 6/199 (3%)
Strand=Plus/Minus
Query 361 AGCTAAGGCCCCGAAATGACAGCTAAGTTAAACTAACGAAGTCTGATTGCTAAGACAGCT 420
|||||||||||| ||||||| ||| ||| | | || || || | ||| |||||||
Sbjct 12367 AGCTAAGGCCCCTAAATGACCGCTCAGTGATA--AAGGAGGTAGGGGTGCAGAGACAGCC 12310
Query 421 AGGATGTTGGCTTGGAAGCAGCCATTCATTTAAAGAGTGCGTAACAGCTCACTAGTCGAG 480
|||| ||| || | |||||||||| | || ||||||||||||| |||||||| |||||
Sbjct 12309 AGGAGGTTTGCCTAGAAGCAGCCACCC-TTGAAAGAGTGCGTAATAGCTCACTGATCGAG 12251
Query 481 GAGTCGGGCGTGGATAATAATCGGGTATTAAGTTGTCTACCGAAGCAGTGGGATCATTTA 540
|| ||| || || | |||| |||| ||| ||||||| ||||||| | |
Sbjct 12250 CGCTCTTGCGCCGAAGATGAACGGG-GCTAAGCGATCTGCCGAAGCTGTGGGAT-GTAAA 12193
Query 541 TATG-ATCGGTAGGGGAGC 558
||| ||||||||||||||
Sbjct 12192 AATGCATCGGTAGGGGAGC 12174
>seq10983
Length=12702
Score = 93.3 bits (102), Expect = 1e-16
Identities = 109/145 (75%), Gaps = 3/145 (2%)
Strand=Plus/Minus
Query 336 CGAGAGGAGAAGAATCCGGACTATCAGCTAAGGCCCCGAAATGACAGCTAAGTTAAACTA 395
||||||| || | ||||| | |||| |||||||| ||||||| ||| ||| | | |
Sbjct 10354 CGAGAGGGAAACAGCCCGGATCACCAGCCAAGGCCCCTAAATGACCGCTCAGTGATA--A 10297
Query 396 ACGAAGTCTGATTGCTAAGACAGCTAGGATGTTGGCTTGGAAGCAGCCATTCATTTAAAG 455
| || || | ||| ||||||| |||| ||| || | |||||||||| | || ||||
Sbjct 10296 AGGAGGTAGGGGTGCAGAGACAGCCAGGAGGTTTGCCTAGAAGCAGCCACCC-TTGAAAG 10238
Query 456 AGTGCGTAACAGCTCACTAGTCGAG 480
||||||||| |||||||| |||||
Sbjct 10237 AGTGCGTAATAGCTCACTGATCGAG 10213
>seq11995
Length=11566
Score = 84.2 bits (92), Expect = 7e-14
Identities = 90/119 (76%), Gaps = 0/119 (0%)
Strand=Plus/Plus
Query 2 CGAGTCCGAACAGGGCGACAGTCGCTGGGTGTAGACCCGAAACCAAGTGATCTACCCATG 61
|||||| | ||||||| ||| ||| | | |||||||| | |||||||| |||||
Sbjct 9 CGAGTCTTCATAGGGCGATTGTCACTGCTTATGGACCCGAACCTGGGTGATCTATCCATG 68
Query 62 GCCAGGATGAAGGTGCGGTAACACGCCCTGGAGGTCCGAACCCACTAATGTTGAAAAAT 120
||||||||||| | ||| | || |||||||||||||| ||| |||||||| |||
Sbjct 69 ACCAGGATGAAGCTTGGGTGAAACTAAGTGGAGGTCCGAACCGACTGATGTTGAAGAAT 127
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1688827092480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |