Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eragrostis_20tef_20[genbank_20GCA_5F000970635.1_202015-04-08] 13,883 sequences; 607,317,615 total letters Query= AAMG01001213.1 Length=600 Score E Sequences producing significant alignments: (Bits) Value seq2549 87.8 7e-15 seq1013 75.2 4e-11 >seq2549 Length=80488 Score = 87.8 bits (96), Expect = 7e-15 Identities = 74/91 (81%), Gaps = 0/91 (0%) Strand=Plus/Minus Query 501 GGTACTTTTCACCTTTCCCTCACGGTACTTGTCCGCTATCGGTCACCAAGGAGTATTTAG 560 ||| |||||||||||||||||||| |||| | |||||||||| ||| | |||||||||| Sbjct 71522 GGTTCTTTTCACCTTTCCCTCACGATACTACTTCGCTATCGGTTACCCAAGAGTATTTAG 71463 Query 561 GCTTAACGGGTGGTCCCGCCAGATTCACACG 591 ||| |||||||| | |||||||||| Sbjct 71462 CCTTGCAAGGTGGTCCTTGCTGATTCACACG 71432 >seq1013 Length=149596 Score = 75.2 bits (82), Expect = 4e-11 Identities = 53/61 (87%), Gaps = 0/61 (0%) Strand=Plus/Plus Query 517 CCCTCACGGTACTTGTCCGCTATCGGTCACCAAGGAGTATTTAGGCTTAACGGGTGGTCC 576 |||||||||||||||| |||||||||||| |||| || ||||||||| ||||||||| Sbjct 8527 CCCTCACGGTACTTGTACGCTATCGGTCATTGAGGAATACTTAGGCTTAGAGGGTGGTCC 8586 Query 577 C 577 | Sbjct 8587 C 8587 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1817347662592