Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eragrostis_20tef_20[genbank_20GCA_5F000970635.1_202015-04-08] 13,883 sequences; 607,317,615 total letters Query= AAMG01002193.1 Length=560 Score E Sequences producing significant alignments: (Bits) Value seq155 80.6 9e-13 >seq155 Length=302024 Score = 80.6 bits (88), Expect = 9e-13 Identities = 106/145 (73%), Gaps = 4/145 (3%) Strand=Plus/Minus Query 336 CGAGAGGAGAAGAATCCGGACTATCAGCTAAGGCCCCGAAATGACAGCTAAGTTAAACTA 395 ||||||| || || || ||| | ||||||||||||| ||||||| | ||| | || Sbjct 301131 CGAGAGGGAAACAACCCCGACCACCAGCTAAGGCCCCTAAATGACCACGCAGTGA---TA 301075 Query 396 ACGAAGTCTGATTGCTAAGACAGCTAGGATGTTGGCTTGGAAGCAGCCATTCATTTAAAG 455 | || || | ||| |||||||| | | || || | |||||||||| | |||| || Sbjct 301074 AAGAGGTGGGGGTGCAAAGACAGCCAAAAGATTTGCCTAGAAGCAGCCA-CCCTTTATAG 301016 Query 456 AGTGCGTAACAGCTCACTAGTCGAG 480 |||| |||| |||||||| ||||| Sbjct 301015 AGTGTGTAATAGCTCACTGATCGAG 300991 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1689365432832