Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eragrostis_20tef_20[genbank_20GCA_5F000970635.1_202015-04-08] 13,883 sequences; 607,317,615 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq433 147 7e-33 seq7909 138 3e-30 >seq433 Length=213669 Score = 147 bits (162), Expect = 7e-33 Identities = 104/118 (88%), Gaps = 1/118 (1%) Strand=Plus/Plus Query 388 GTACTATCAAATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATT 447 |||| |||||| |||| ||||||||||||||||||||||||||||||||| || ||| Sbjct 51883 GTACCATCAAACAAACTATAACTGATTTAATGAGCCATTCGCAGTTTCACAGTTCGAATT 51942 Query 448 GCTT-ATACTTAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 || |||||| |||||||||| |||||||||||||||||||||||||||||||||| Sbjct 51943 AGTTCATACTTGCACATGCATGGTTTAATCTTTGAGACAAGCATATGACTACTGGCAG 52000 >seq7909 Length=8605 Score = 138 bits (152), Expect = 3e-30 Identities = 95/106 (90%), Gaps = 1/106 (1%) Strand=Plus/Minus Query 400 AAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTT-ATACTTA 458 |||| ||||||||||||||||||||||||||||||||| || ||| || |||||| Sbjct 8479 AAACTATAACTGATTTAATGAGCCATTCGCAGTTTCACAGTTCGAATTAGTTCATACTTG 8420 Query 459 GACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 8419 CACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 8374 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510190311168