Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hordeum_20pubiflorum_20[genbank_20GCA_5F000582825.1_202013-08-30]
1,818,420 sequences; 1,425,274,558 total letters
Query= AAMG01000636.1
Length=426
Score E
Sequences producing significant alignments: (Bits) Value
seq1811529 489 4e-136
seq879309 237 4e-60
seq57130 233 5e-59
seq739250 179 9e-43
seq1712662 154 4e-35
seq747063 138 3e-30
seq1759849 131 4e-28
seq739410 131 4e-28
seq779774 129 1e-27
seq137751 129 1e-27
seq1784692 127 5e-27
seq846665 118 3e-24
seq200168 109 1e-21
seq1749024 107 5e-21
seq847794 104 6e-20
seq756768 104 6e-20
seq265892 104 6e-20
seq3550 104 6e-20
seq770296 96.9 9e-18
seq751900 96.9 9e-18
seq747573 96.9 9e-18
seq828902 95.1 3e-17
seq39941 93.3 1e-16
seq1745055 89.7 1e-15
seq775033 89.7 1e-15
seq444599 89.7 1e-15
seq949662 84.2 5e-14
seq91139 84.2 5e-14
seq106095 82.4 2e-13
seq1741434 78.8 2e-12
seq800564 77.0 8e-12
seq752700 77.0 8e-12
seq586753 77.0 8e-12
seq300180 77.0 8e-12
seq212343 77.0 8e-12
seq960387 75.2 3e-11
seq478360 73.4 1e-10
>seq1811529
Length=469
Score = 489 bits (542), Expect = 4e-136
Identities = 336/377 (89%), Gaps = 3/377 (1%)
Strand=Plus/Minus
Query 53 GAGACAGCGCCGCCATCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATT 112
||||||| ||| ||||||||||| ||||||| ||||||||||||||||||||||||||
Sbjct 469 GAGACAGTGCCCAGATCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATT 410
Query 113 TCGCTACCTTAGGACCGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCT 172
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 409 TCGCTACCTTAGGACCGTTATAGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCT 350
Query 173 TCGCGTTAGCTAACCCCATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATAC 232
|||| | ||| |||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 349 TCGCTTGCGCTGACCCCATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCGTATAC 290
Query 233 GTCCACTTTCGTGTTTGCAGAGTGCTGTGTTTTTAATAAACAGTCGCAGCGGCCTGGTAT 292
||||||||||||||||||| |||||||||||||||||||||||| ||||| |||||||
Sbjct 289 GTCCACTTTCGTGTTTGCACAGTGCTGTGTTTTTAATAAACAGTTGCAGCCAGCTGGTAT 230
Query 293 CTTCGACCGGCATGAGCTTACGGAGCAAGTC-CTTCACC--CTCACCGGCGCACCTTCTC 349
||||||| | | |||| ||||||||| ||||||| | | | ||| |||||||
Sbjct 229 CTTCGACTGATTTCAGCTCCACGAGCAAGTCGCTTCACCTACATATCAGCGTGCCTTCTC 170
Query 350 CCGAAGTTACGGTGCCTTTTTGCCTAGTTCCTTCCCCCGAGTTCTCTCAAGCGCCTTGGT 409
|||||||||||| || ||||||||||||||||| |||||||||||||||||||||||||
Sbjct 169 CCGAAGTTACGGCACCATTTTGCCTAGTTCCTTCACCCGAGTTCTCTCAAGCGCCTTGGT 110
Query 410 ATTCTCTACCCAACCAC 426
|||||||||| |||||
Sbjct 109 ATTCTCTACCTGACCAC 93
>seq879309
Length=873
Score = 237 bits (262), Expect = 4e-60
Identities = 300/413 (73%), Gaps = 22/413 (5%)
Strand=Plus/Minus
Query 7 TACACTGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCC 66
||| | |||||||||| | || ||||||||||| | ||| | |||||||||| ||
Sbjct 510 TACTCCGCATCTTCACGGAGAATTCAATTTCACCGGGTCCATGTCGGAGACAGCGGGGCA 451
Query 67 ATCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGA 126
||||||| |||||||||||||||| ||||| ||||||||||||||||||||||||||
Sbjct 450 GTCGTTACACCATTCGTGCAGGTCGCTACTTATGCGACAAGGAATTTCGCTACCTTAGGA 391
Query 127 CCGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTCGCGTTAGCTAAC 186
| |||| ||||| ||||||||||||||||||||| || | ||| ||| | ||
Sbjct 390 CAGTTAGAGTTACTGCCGCCGTTTACCGGGGCTTCCATTCAAAGC------TTATCACAC 337
Query 187 CCCATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTTTCGTGT 246
| | ||||||| |||||||||||| |||| || |||||| || || | |
Sbjct 336 TTCTCCTTCCGACCTTCCAGCACCGGGCAGGTGTCAGACTCTATACATCGTGTTACCACT 277
Query 247 TTGCAGAGTGCTGTGTTTTTAATAAACAGTCGCAGCGGCCTGGTATCTTCGACCGGCATG 306
| ||||||| ||||||||||||||||||||||| | |||||||| | | | | |
Sbjct 276 TAGCAGAGTCCTGTGTTTTTAATAAACAGTCGCTACCCCCTGGTATGTGCCGCTTTCCTA 217
Query 307 AGCTTACGGAGCAAGTCCTTCACCCTCACCGGCGCACCTTCTCCCGAAGTTACGGTGCCT 366
| | | || || |||| ||||||||||||||||||| | |
Sbjct 216 ATCAAA---AGATAGGAGAGCACC------------CCTTCTCCCGAAGTTACGGGGTCA 172
Query 367 TTTTGCCTAGTTCCTTCCCCCGAGTTCTCTC-AAGCGCCTTGGTATTCTCTAC 418
||||||| ||||||||| | |||||||| | ||||| | |||| ||||||
Sbjct 171 TTTTGCCGAGTTCCTTCGACATGGTTCTCTCGACGCGCCCTAGTATACTCTAC 119
>seq57130
Length=3464
Score = 233 bits (258), Expect = 5e-59
Identities = 227/292 (78%), Gaps = 4/292 (1%)
Strand=Plus/Minus
Query 13 GCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCCATCGTT 72
|||||||||||| || || ||||||| ||| ||| ||||||| ||| ||||||
Sbjct 304 GCATCTTCACAGACATGTCTATTTCACCGAGCCTCTCTCCGAGACAGTGCCCAGATCGTT 245
Query 73 ACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 132
||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 244 ACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 185
Query 133 TTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTC----GCGTTAGCTAACCC 188
| ||||||||||||||| |||||||||||| || ||||| | | || | |||
Sbjct 184 TAGTTACGGCCGCCGTTCACCGGGGCTTCGGTCGCCGGCTTCCCTGTCATCAGTTCACCA 125
Query 189 CATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTTTCGTGTTT 248
| || | |||| ||||| ||||||||||| ||| |||| | ||| || |||
Sbjct 124 ACTTCCTTGATCTTCTGGCACTAGGCAGGCGTCAGCCCCCATACATGGTCTTACGACTTT 65
Query 249 GCAGAGTGCTGTGTTTTTAATAAACAGTCGCAGCGGCCTGGTATCTTCGACC 300
|| ||| |||||||||| ||||||||||| |||||||| || |||||
Sbjct 64 GCGGAGACCTGTGTTTTTGGTAAACAGTCGCCCGGGCCTGGTCACTGCGACC 13
>seq739250
Length=206
Score = 179 bits (198), Expect = 9e-43
Identities = 160/200 (80%), Gaps = 4/200 (2%)
Strand=Plus/Plus
Query 27 ATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCCATCGTTACGCCATTCGTGCA 86
|| || ||||||| ||| ||| ||||||| ||| ||||||||||| |||||||
Sbjct 4 ATGTCTATTTCACCGAGCCTCTCTCCGAGACAGTGCCCAGATCGTTACGCCTTTCGTGCG 63
Query 87 GGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATTGTTACGGCCGCC 146
||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||
Sbjct 64 GGTCGGAACTTACCCGACAAGGAATTTCGCTTCCTTAGGACCGTTATAGTTACGGCCGCC 123
Query 147 GTTTACCGGGGCTTCGATCAAGAGCTTC----GCGTTAGCTAACCCCATCAATTAACCTT 202
||| |||||||||||| || ||||| | | || | ||| | || |||||
Sbjct 124 GTTCACCGGGGCTTCGGTCGCCGGCTTCCCTGTCATCAGTTCACCAACTTCCTTGACCTT 183
Query 203 CCGGCACCGGGCAGGCGTCA 222
||||||| ||||||||||||
Sbjct 184 CCGGCACTGGGCAGGCGTCA 203
>seq1712662
Length=267
Score = 154 bits (170), Expect = 4e-35
Identities = 102/113 (90%), Gaps = 0/113 (0%)
Strand=Plus/Minus
Query 53 GAGACAGCGCCGCCATCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATT 112
||||||| ||| ||||||||||| | |||| ||||||||||||||||||||||||||
Sbjct 136 GAGACAGTGCCCAGATCGTTACGCCTTCTGTGCTGGTCGGAACTTACCCGACAAGGAATT 77
Query 113 TCGCTACCTTAGGACCGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCGATC 165
||||||||||||||||||||| ||||||||||||||| |||||||||||| ||
Sbjct 76 TCGCTACCTTAGGACCGTTATAGTTACGGCCGCCGTTCACCGGGGCTTCGGTC 24
>seq747063
Length=204
Score = 138 bits (152), Expect = 3e-30
Identities = 146/192 (76%), Gaps = 4/192 (2%)
Strand=Plus/Plus
Query 113 TCGCTACCTTAGGACCGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCT 172
||||||||||||||||||||| ||||||||||||||| |||||||||||| || |||
Sbjct 1 TCGCTACCTTAGGACCGTTATAGTTACGGCCGCCGTTCACCGGGGCTTCGGTCGCCGGCT 60
Query 173 TCGCGTT----AGCTAACCCCATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCT 228
|| | | || | ||| | || |||||||| ||| |||||||||||| |||
Sbjct 61 TCCCTGTCATCAGTTCACCAACTTCCTTGACCTTCCGTCACTGGGCAGGCGTCAGCCCCC 120
Query 229 ATACGTCCACTTTCGTGTTTGCAGAGTGCTGTGTTTTTAATAAACAGTCGCAGCGGCCTG 288
|||| | ||| || ||||| ||| |||||||||| ||||||||||| ||||||
Sbjct 121 ATACATGGTCTTACGACTTTGCGGAGACCTGTGTTTTTGGTAAACAGTCGCCCGGGCCTG 180
Query 289 GTATCTTCGACC 300
|| || |||||
Sbjct 181 GTCACTGCGACC 192
>seq1759849
Length=566
Score = 131 bits (144), Expect = 4e-28
Identities = 117/147 (80%), Gaps = 0/147 (0%)
Strand=Plus/Plus
Query 2 GCGGATACACTGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCG 61
|| |||| | |||| ||||||| || || ||||||| || ||| | ||||||| |
Sbjct 30 GCAGATAGTCCGCATATTCACAGACATGTCTATTTCACGAAGCCTCTCTTCGAGACAGTG 89
Query 62 CCGCCATCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCT 121
| ||||||||| | ||| ||| || || ||||||||||||||||||||||||||| |
Sbjct 90 TCCAGATCGTTACGTCTTTCCTGCGGGCCGAAACTTACCCGACAAGGAATTTCGCTACAT 149
Query 122 TAGGACCGTTATTGTTACGGCCGCCGT 148
|||||||||| | ||||||||||||||
Sbjct 150 TAGGACCGTTGTAGTTACGGCCGCCGT 176
>seq739410
Length=235
Score = 131 bits (144), Expect = 4e-28
Identities = 142/188 (76%), Gaps = 4/188 (2%)
Strand=Plus/Plus
Query 117 TACCTTAGGACCGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTCGC 176
||||||||||||||||| ||||||||||||||| |||||||||||| || ||||| |
Sbjct 1 TACCTTAGGACCGTTATAGTTACGGCCGCCGTTCACCGGGGCTTCGGTCGCCGGCTTCCC 60
Query 177 GTT----AGCTAACCCCATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATAC 232
| || | ||| | || |||||||||||| |||||||||||| | | ||||
Sbjct 61 TGTCATCAGTTCACCAACTTCCTTGACCTTCCGGCACTGGGCAGGCGTCAGCCACCATAC 120
Query 233 GTCCACTTTCGTGTTTGCAGAGTGCTGTGTTTTTAATAAACAGTCGCAGCGGCCTGGTAT 292
| ||| || ||||| ||| |||||||||| ||||||||||| ||||||||
Sbjct 121 ATGGTCTTACGACTTTGCGGAGACCTGTGTTTTTGGTAAACAGTCGCCCGGGCCTGGTCA 180
Query 293 CTTCGACC 300
|| |||||
Sbjct 181 CTGCGACC 188
>seq779774
Length=2835
Score = 129 bits (142), Expect = 1e-27
Identities = 86/96 (90%), Gaps = 0/96 (0%)
Strand=Plus/Minus
Query 67 ATCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGA 126
|| ||||| || ||||||| ||||| |||||||| |||||||||| ||||||||||||||
Sbjct 2304 ATTGTTACACCTTTCGTGCGGGTCGAAACTTACCTGACAAGGAATCTCGCTACCTTAGGA 2245
Query 127 CCGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCG 162
||||||| ||||||||||||||| || |||||||||
Sbjct 2244 CCGTTATAGTTACGGCCGCCGTTCACAGGGGCTTCG 2209
>seq137751
Length=1188
Score = 129 bits (142), Expect = 1e-27
Identities = 76/79 (96%), Gaps = 0/79 (0%)
Strand=Plus/Minus
Query 87 GGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATTGTTACGGCCGCC 146
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 1188 GGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATAGTTACGGCCGCC 1129
Query 147 GTTTACCGGGGCTTCGATC 165
||| |||||||||||| ||
Sbjct 1128 GTTCACCGGGGCTTCGGTC 1110
>seq1784692
Length=254
Score = 127 bits (140), Expect = 5e-27
Identities = 109/135 (81%), Gaps = 0/135 (0%)
Strand=Plus/Minus
Query 14 CATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCCATCGTTA 73
||||||||| | | ||||||||||| | ||| | ||||||||||| || |||||
Sbjct 135 CATCTTCACGGAGTATTCAATTTCACCGGGTCCATGTTGGAGACAGCGGGGCAGTCGTTT 76
Query 74 CGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTAT 133
| |||||||||||||||| |||| |||||||||||||||||||||| |||| ||||
Sbjct 75 CACCATTCGTGCAGGTCGCTCCTTATGCGACAAGGAATTTCGCTACCTTTGGACAGTTAG 16
Query 134 TGTTACGGCCGCCGT 148
||||| ||||||||
Sbjct 15 AGTTACTGCCGCCGT 1
>seq846665
Length=446
Score = 118 bits (130), Expect = 3e-24
Identities = 94/113 (83%), Gaps = 0/113 (0%)
Strand=Plus/Minus
Query 13 GCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCCATCGTT 72
||||||| || | | ||||||||| |||| ||||||||||| | ||||||
Sbjct 113 GCATCTTTACTCGTAATGCAATTTCACCGAGTTCATGGTGGAGACAGTAGGGAAATCGTT 54
Query 73 ACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGG 125
|| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 53 ACTCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGG 1
>seq200168
Length=1031
Score = 109 bits (120), Expect = 1e-21
Identities = 140/194 (72%), Gaps = 13/194 (7%)
Strand=Plus/Minus
Query 86 AGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATTGTTACGGCCGC 145
||||| ||||| |||| | |||||||||||||||||||| |||| ||||| |||||
Sbjct 261 AGGTCACTACTTATGCGACGAAGAATTTCGCTACCTTAGGACAGTTAGAGTTACTGCCGC 202
Query 146 CGTTTACCGGGGCTTCGATCAAGAGCTTCGCGTTAGCTAACCCCATCAATTAACCTTCCG 205
|||||||||||||||| || | ||| ||| | || | | ||||||| |
Sbjct 201 CGTTTACCGGGGCTTCCATTCAAAGC------TTATCACACTTCTCCTTCTAACCTTTC- 149
Query 206 GCACCGGGCAGGCGTCACACCCTATACGTCCACTTTCGTGTTTGCAGAGTGCTGTGTTTT 265
| |||| |||| || |||||| || || | || ||||||| |||| ||||
Sbjct 148 ------GCCAGGTGTCAGACTCTATACATCGTGTTACCACTTAGCAGAGTCCTGTTTTTT 95
Query 266 TAATAAACAGTCGC 279
||||||||||||||
Sbjct 94 TAATAAACAGTCGC 81
>seq1749024
Length=2811
Score = 107 bits (118), Expect = 5e-21
Identities = 76/87 (87%), Gaps = 0/87 (0%)
Strand=Plus/Minus
Query 75 GCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATT 134
||| ||| ||| || ||||||||||||||||||||||||| ||||||| ||||||||||
Sbjct 2027 GCCTTTCTTGCGGGCCGGAACTTACCCGACAAGGAATTTCTCTACCTTTGGACCGTTATA 1968
Query 135 GTTACGGCCGCCGTTTACCGGGGCTTC 161
||||| ||||| || |||||||||||
Sbjct 1967 GTTACAACCGCCATTAACCGGGGCTTC 1941
>seq847794
Length=265
Score = 104 bits (114), Expect = 6e-20
Identities = 66/72 (92%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 1 CGCGGATACACTGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGC 60
||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 194 CGCGGGTACACTGCATCTTCACAGCGAGTTCAATTTCACTGAGTCTCGGGTGGAGACAGC 253
Query 61 GCCGCCATCGTT 72
|||||| ||
Sbjct 254 CTGGCCATCATT 265
>seq756768
Length=12766
Score = 104 bits (114), Expect = 6e-20
Identities = 135/183 (74%), Gaps = 4/183 (2%)
Strand=Plus/Plus
Query 54 AGACAGCGCCGCCATCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTT 113
|||||| ||| | |||||||| ||| ||| ||||||||||||| ||||||||||||
Sbjct 609 AGACAGTGCCCAAGTTGTTACGCCTTTCATGCGGGTCGGAACTTACTTGACAAGGAATTT 668
Query 114 CGCTACCTTAGGACCGTTATTGTTACGGCCGCCGTTTACCGGGG-CTTCGATCAAGAGCT 172
||| |||||||||||||||| |||||| | || || || |||| || | | | ||
Sbjct 669 CGCCACCTTAGGACCGTTATAGTTACGATCTCCATTCACAGGGGTTTTGGTTGTTGTCCT 728
Query 173 TCGCGTTAGCTA-ACCCCATCAA--TTAACCTTCCGGCACCGGGCAGGCGTCACACCCTA 229
| | | ||| | ||| ||| || ||||| ||| | |||||||||||| ||| |
Sbjct 729 CCCTCTCATCTAGTCACCAACAACCTTGACCTTGCGGAATTGGGCAGGCGTCAACCCCCA 788
Query 230 TAC 232
|||
Sbjct 789 TAC 791
>seq265892
Length=10872
Score = 104 bits (114), Expect = 6e-20
Identities = 62/65 (95%), Gaps = 0/65 (0%)
Strand=Plus/Plus
Query 101 CGACAAGGAATTTCGCTACCTTAGGACCGTTATTGTTACGGCCGCCGTTTACCGGGGCTT 160
||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||
Sbjct 93 CGACAAGGAATTTCGCTACCTTAGGACCGTTATAGTTACGGCCGCCGTTCACCGGGGCTT 152
Query 161 CGATC 165
|| ||
Sbjct 153 CGGTC 157
>seq3550
Length=4321
Score = 104 bits (114), Expect = 6e-20
Identities = 82/97 (85%), Gaps = 5/97 (5%)
Strand=Plus/Plus
Query 74 CGCCATTCGTGCAGGTCGGAACTTAC----CCGACAAGGAATTTCGCTACCTTAGGACCG 129
|||| ||| || ||||||||||||| |||||||||||||||||||||||||||||
Sbjct 215 CGCCTTTCATGTGGGTCGGAACTTACGTACCCGACAAGGAATTTCGCTACCTTAGGACCA 274
Query 130 TTATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCA 166
|||| |||||||||| |||| || |||| |||| |||
Sbjct 275 TTATAGTTACGGCCG-CGTTCACTGGGGATTCGGTCA 310
>seq770296
Length=5940
Score = 96.9 bits (106), Expect = 9e-18
Identities = 58/61 (95%), Gaps = 0/61 (0%)
Strand=Plus/Minus
Query 105 AAGGAATTTCGCTACCTTAGGACCGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCGAT 164
||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||| |
Sbjct 5940 AAGGAATTTCGCTACCTTAGGACCGTTATAGTTACGGCCGCCGTTCACCGGGGCTTCGGT 5881
Query 165 C 165
|
Sbjct 5880 C 5880
>seq751900
Length=9750
Score = 96.9 bits (106), Expect = 9e-18
Identities = 130/179 (73%), Gaps = 9/179 (5%)
Strand=Plus/Minus
Query 101 CGACAAGGAATTTCGCTACCTTAGGACCGTTATTGTTACGGCCGCCGTTTACCGGGGCTT 160
||||||||||||||||||||||||||| ||| ||||| |||| | |||||| ||||||
Sbjct 2676 CGACAAGGAATTTCGCTACCTTAGGACAATTAGAGTTACTGCCGTCTTTTACCAGGGCTT 2617
Query 161 CGATCAAGAGCTTCGCGTTAGCTAACCCCATCAATTAACCTTCCGGCACCGGGCAGGCGT 220
| || | | ||| ||| | || | || ||||||| ||||| ||||||
Sbjct 2616 CCATTCAAAACTT----TTATCACACTTCTTCTTCCGACCTTCCAGCACC-GGCAGG--- 2565
Query 221 CACACCCTATACGTCCACTTTCGTGTTTGCAGAGTGCTGTGTTTTTAATAAACAGTCGC 279
| || ||||| || | | || |||| || |||||||||||||||||||||||
Sbjct 2564 -AGACTCTATATATCGTGTCACCACTTAGCAGCGTCCTGTGTTTTTAATAAACAGTCGC 2507
>seq747573
Length=210
Score = 96.9 bits (106), Expect = 9e-18
Identities = 151/220 (69%), Gaps = 22/220 (10%)
Strand=Plus/Plus
Query 207 CACCGGGCAGGCGTCACACCCTATACGTCCACTTTCGTGTTTGCAGAGTGCTGTGTTTTT 266
||| |||||||||||| ||| |||| | ||| || ||||| ||| ||||||||||
Sbjct 1 CACTGGGCAGGCGTCAGCCCCCATACATGGTCTTACGACTTTGCGGAGACCTGTGTTTTT 60
Query 267 AATAAACAGTCGCAGCGGCCTGGTATCTTCGACCGGCATGAGCTTACGGAGCAAGTCCTT 326
||||||||||| |||||||| || ||||| | | | |||
Sbjct 61 GGTAAACAGTCGCCCGGGCCTGGTCACTGCGACCCCCTTTTGT-----GAGG-------- 107
Query 327 CACCCTCACCGGCGCACCTTCTCCCGAAGTTACGGTGCCTTTTTGCCTAGTTCCTTCCCC 386
|||| | ||||||||||||||||||| || ||||||| ||||||||
Sbjct 108 ---------CGGCACCCCTTCTCCCGAAGTTACGGGGCTATTTTGCCGAGTTCCTTAGAG 158
Query 387 CGAGTTCTCTCAAGCGCCTTGGTATTCTCTACCCAACCAC 426
||||| |||| || ||| ||||||||||||| | ||||
Sbjct 159 AGAGTTGTCTCGCGCCCCTAGGTATTCTCTACCTACCCAC 198
>seq828902
Length=1197
Score = 95.1 bits (104), Expect = 3e-17
Identities = 93/120 (78%), Gaps = 4/120 (3%)
Strand=Plus/Minus
Query 117 TACCTTAGGACCGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTC-- 174
||||||||||||||||| ||||||||||||||| |||||||||||| || |||||
Sbjct 1197 TACCTTAGGACCGTTATAGTTACGGCCGCCGTTCACCGGGGCTTCGGTCGCCGGCTTCCC 1138
Query 175 --GCGTTAGCTAACCCCATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATAC 232
| | || | ||| | || |||||||||||| |||||||||||| ||| ||||
Sbjct 1137 TGTCATCAGTTCACCAACTTCCTTGACCTTCCGGCACTGGGCAGGCGTCAGCCCCCATAC 1078
>seq39941
Length=7243
Score = 93.3 bits (102), Expect = 1e-16
Identities = 60/66 (91%), Gaps = 0/66 (0%)
Strand=Plus/Minus
Query 59 GCGCCGCCATCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTA 118
||| | ||||||||||||| |||| || ||||||||||||||||||||||||||||||||
Sbjct 3286 GCGACTCCATCGTTACGCCTTTCGCGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTA 3227
Query 119 CCTTAG 124
| ||||
Sbjct 3226 CGTTAG 3221
>seq1745055
Length=6470
Score = 89.7 bits (98), Expect = 1e-15
Identities = 52/54 (96%), Gaps = 0/54 (0%)
Strand=Plus/Plus
Query 67 ATCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACC 120
||||||||||| ||||||| ||||||||||||||||||||||||||||||||||
Sbjct 1258 ATCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACC 1311
>seq775033
Length=2399
Score = 89.7 bits (98), Expect = 1e-15
Identities = 82/104 (79%), Gaps = 0/104 (0%)
Strand=Plus/Plus
Query 15 ATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCCATCGTTAC 74
|||||||||| || || |||| || ||| ||| |||||| ||| || |||||
Sbjct 1381 ATCTTCACAGACATGTCTATTTTACCGAGCCTCTCTCCGAGACACTGCCCTGATTGTTAC 1440
Query 75 GCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTA 118
||| || ||| ||||||||||||||||||||||||||||||||
Sbjct 1441 GCCTTTTGTGTGGGTCGGAACTTACCCGACAAGGAATTTCGCTA 1484
>seq444599
Length=228
Score = 89.7 bits (98), Expect = 1e-15
Identities = 86/110 (78%), Gaps = 4/110 (4%)
Strand=Plus/Plus
Query 117 TACCTTAGGACCGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTC-- 174
||||||||||||||||| ||||||||||||||| |||||||||||| || |||||
Sbjct 1 TACCTTAGGACCGTTATAGTTACGGCCGCCGTTCACCGGGGCTTCGGTCGCCGGCTTCCC 60
Query 175 --GCGTTAGCTAACCCCATCAATTAACCTTCCGGCACCGGGCAGGCGTCA 222
| | || | ||| | || |||||||||||| ||||||||||||
Sbjct 61 TGTCATCAGTTCACCAACTTCCTTGACCTTCCGGCACTGGGCAGGCGTCA 110
>seq949662
Length=289
Score = 84.2 bits (92), Expect = 5e-14
Identities = 82/106 (77%), Gaps = 0/106 (0%)
Strand=Plus/Minus
Query 195 TTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTTTCGTGTTTGCAGAG 254
|| |||||||||||| |||||||||||| ||| |||| | ||| || ||||| |||
Sbjct 265 TTGACCTTCCGGCACTGGGCAGGCGTCAGCCCCCATACATGGTCTTACGACTTTGCGGAG 206
Query 255 TGCTGTGTTTTTAATAAACAGTCGCAGCGGCCTGGTATCTTCGACC 300
|||||||||| |||| |||||| |||||||| || |||||
Sbjct 205 ACCTGTGTTTTTGGTAAATAGTCGCCCGGGCCTGGTCACTACGACC 160
>seq91139
Length=2371
Score = 84.2 bits (92), Expect = 5e-14
Identities = 127/183 (69%), Gaps = 17/183 (9%)
Strand=Plus/Plus
Query 54 AGACAGCGCCGCCATCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTT 113
|||||| ||| |||||| | || | ||||| ||||||||||||| ||
Sbjct 152 AGACAGTGCCCAGATCGTTGCACCTTCCGTGCGGGTCGGAACTTACACGG---------- 201
Query 114 CGCTACCTTAGGACCGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTT 173
||||||||||||||||| |||| || | ||||| ||||||| |||| || ||||
Sbjct 202 ---TACCTTAGGACCGTTATAGTTATGGACTCCGTTCACCGGGGATTCGGTCGTCGGCTT 258
Query 174 C----GCGTTAGCTAACCCCATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTA 229
| | | || | ||| | || | |||||||||| |||||||||||| ||| |
Sbjct 259 CCCTGTCATCAGTTCACCAATTTCCTTGATCTTCCGGCACTGGGCAGGCGTCAACCCCCA 318
Query 230 TAC 232
|||
Sbjct 319 TAC 321
>seq106095
Length=2938
Score = 82.4 bits (90), Expect = 2e-13
Identities = 75/95 (79%), Gaps = 0/95 (0%)
Strand=Plus/Plus
Query 67 ATCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGA 126
||| ||| | | ||| || ||||||||||||| ||||||||| |||||||||||| ||
Sbjct 2041 ATCATTATGTCTTTCATGTGTGTCGGAACTTACCTGACAAGGAAATTCGCTACCTTAAGA 2100
Query 127 CCGTTATTGTTACGGCCGCCGTTTACCGGGGCTTC 161
||||| ||||||| ||| ||| || | |||||
Sbjct 2101 TTGTTATAGTTACGGTCGCAGTTCACTAGAGCTTC 2135
>seq1741434
Length=1957
Score = 78.8 bits (86), Expect = 2e-12
Identities = 67/83 (81%), Gaps = 0/83 (0%)
Strand=Plus/Plus
Query 337 GGCGCACCTTCTCCCGAAGTTACGGTGCCTTTTTGCCTAGTTCCTTCCCCCGAGTTCTCT 396
||| | ||||||||||||||||||| || ||||||| |||||||| ||||| |||
Sbjct 1872 GGCACCCCTTCTCCCGAAGTTACGGGGCTATTTTGCCGAGTTCCTTAGAGAGAGTTGTCT 1931
Query 397 CAAGCGCCTTGGTATTCTCTACC 419
| || ||| |||||||||||||
Sbjct 1932 CGCGCCCCTAGGTATTCTCTACC 1954
>seq800564
Length=2537
Score = 77.0 bits (84), Expect = 8e-12
Identities = 50/55 (91%), Gaps = 0/55 (0%)
Strand=Plus/Minus
Query 103 ACAAGGAATTTCGCTACCTTAGGACCGTTATTGTTACGGCCGCCGTTTACCGGGG 157
|||||||||||||||||| |||||| |||| ||||| |||||||||||||||||
Sbjct 1811 ACAAGGAATTTCGCTACCGTAGGACAGTTAGAGTTACTGCCGCCGTTTACCGGGG 1757
>seq752700
Length=6326
Score = 77.0 bits (84), Expect = 8e-12
Identities = 56/65 (86%), Gaps = 0/65 (0%)
Strand=Plus/Minus
Query 53 GAGACAGCGCCGCCATCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATT 112
||||||| ||| ||| ||||||| ||||||| |||| ||||||||||||||||||||
Sbjct 4314 GAGACAGTGCCCAGATCATTACGCCTTTCGTGCGGGTCTTAACTTACCCGACAAGGAATT 4255
Query 113 TCGCT 117
|||||
Sbjct 4254 TCGCT 4250
>seq586753
Length=219
Score = 77.0 bits (84), Expect = 8e-12
Identities = 71/90 (79%), Gaps = 0/90 (0%)
Strand=Plus/Plus
Query 337 GGCGCACCTTCTCCCGAAGTTACGGTGCCTTTTTGCCTAGTTCCTTCCCCCGAGTTCTCT 396
||| | ||||||||||||||||||| | ||||||| |||||||| ||||| |||
Sbjct 89 GGCACCCCTTCTCCCGAAGTTACGGGGATATTTTGCCGAGTTCCTTAGAGAGAGTTGTCT 148
Query 397 CAAGCGCCTTGGTATTCTCTACCCAACCAC 426
| || ||| ||||||||||||| | ||||
Sbjct 149 CGCGCCCCTAGGTATTCTCTACCTACCCAC 178
>seq300180
Length=2865
Score = 77.0 bits (84), Expect = 8e-12
Identities = 66/82 (80%), Gaps = 0/82 (0%)
Strand=Plus/Minus
Query 337 GGCGCACCTTCTCCCGAAGTTACGGTGCCTTTTTGCCTAGTTCCTTCCCCCGAGTTCTCT 396
||| | ||||||||||||||||||| || ||||||| |||||||| ||||| |||
Sbjct 82 GGCACCCCTTCTCCCGAAGTTACGGGGCTATTTTGCCGAGTTCCTTAGAGAGAGTTGTCT 23
Query 397 CAAGCGCCTTGGTATTCTCTAC 418
| || ||| ||||||||||||
Sbjct 22 CGCGCCCCTAGGTATTCTCTAC 1
>seq212343
Length=518
Score = 77.0 bits (84), Expect = 8e-12
Identities = 59/70 (84%), Gaps = 0/70 (0%)
Strand=Plus/Plus
Query 104 CAAGGAATTTCGCTACCTTAGGACCGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCGA 163
|||||||||||||||||||||||| |||| |||| | |||| |||||||||||||| |
Sbjct 426 CAAGGAATTTCGCTACCTTAGGACAGTTAGAGTTATTGTCGCCATTTACCGGGGCTTCCA 485
Query 164 TCAAGAGCTT 173
| | |||||
Sbjct 486 TTCAAAGCTT 495
>seq960387
Length=202
Score = 75.2 bits (82), Expect = 3e-11
Identities = 70/90 (78%), Gaps = 0/90 (0%)
Strand=Plus/Minus
Query 337 GGCGCACCTTCTCCCGAAGTTACGGTGCCTTTTTGCCTAGTTCCTTCCCCCGAGTTCTCT 396
||| | ||||||||||||||||||| || ||||||| ||||| | ||||| |||
Sbjct 191 GGCACCCCTTCTCCCGAAGTTACGGGGCTATTTTGCCGAGTTCNNTAGAGAGAGTTGTCT 132
Query 397 CAAGCGCCTTGGTATTCTCTACCCAACCAC 426
| || ||| ||||||||||||| | ||||
Sbjct 131 CGCGCCCCTAGGTATTCTCTACCTACCCAC 102
>seq478360
Length=228
Score = 73.4 bits (80), Expect = 1e-10
Identities = 70/90 (78%), Gaps = 0/90 (0%)
Strand=Plus/Minus
Query 337 GGCGCACCTTCTCCCGAAGTTACGGTGCCTTTTTGCCTAGTTCCTTCCCCCGAGTTCTCT 396
||| | ||||||| |||||||| || || ||||||| |||||||| ||||| |||
Sbjct 131 GGCACCCCTTCTCTCGAAGTTATGGGGCTATTTTGCCGAGTTCCTTAGAGAGAGTTGTCT 72
Query 397 CAAGCGCCTTGGTATTCTCTACCCAACCAC 426
| || ||| ||||||||||||| | ||||
Sbjct 71 CGCGCCCCTAGGTATTCTCTACCTACCCAC 42
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1237873360640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |