Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hordeum_20pubiflorum_20[genbank_20GCA_5F000582825.1_202013-08-30] 1,818,420 sequences; 1,425,274,558 total letters Query= AAMG01001178.1 Length=367 Score E Sequences producing significant alignments: (Bits) Value seq1497236 297 4e-78 seq854589 206 6e-51 seq748334 206 6e-51 seq1769377 199 8e-49 seq614993 196 1e-47 seq1484266 192 1e-46 seq1022886 188 2e-45 seq128944 179 8e-43 seq656910 178 3e-42 seq771549 161 2e-37 seq142307 159 7e-37 seq748961 158 3e-36 seq323673 147 5e-33 seq869198 138 2e-30 seq163296 129 1e-27 seq757116 100 6e-19 seq1762990 95.1 3e-17 seq1754125 91.5 3e-16 seq629719 89.7 1e-15 seq76685 84.2 5e-14 seq3719 82.4 2e-13 seq793278 80.6 6e-13 seq749058 80.6 6e-13 seq778593 78.8 2e-12 seq1212657 77.0 7e-12 seq151560 75.2 2e-11 >seq1497236 Length=308 Score = 297 bits (328), Expect = 4e-78 Identities = 212/241 (88%), Gaps = 2/241 (1%) Strand=Plus/Plus Query 1 CTTTACAATCCGAAGACCTTCTTTCACACACGCGGCATTGGCTGGATCAGGCTTTCGCCC 60 |||||||| |||||| ||||||| || ||||||||||| ||||| ||||||||| ||||| Sbjct 70 CTTTACAACCCGAAGGCCTTCTT-CATACACGCGGCAT-GGCTGCATCAGGCTTGCGCCC 127 Query 61 ATTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAG 120 ||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 128 ATTGTGCAAAATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAG 187 Query 121 TGTGACTGATCATCCTCTCAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCTCA 180 |||| ||| ||| ||||||||||||| || |||||||||||| |||||||| ||||| || Sbjct 188 TGTGGCTGGTCAGCCTCTCAGACCAGCTAGGGATCGTCGCCTAGGTGAGCCGTTACCCCA 247 Query 181 CCAACTAGCTAATCCGACCTAGGCTCATCTGATAGCGCAAGGCCCGAAGGTCCCCTGCTT 240 || |||||||||||| | || ||| |||| ||| || |||||||||||||||| ||| Sbjct 248 CCTACTAGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAAGGTCCCCCTCTT 307 Query 241 T 241 | Sbjct 308 T 308 >seq854589 Length=2248 Score = 206 bits (228), Expect = 6e-51 Identities = 180/220 (82%), Gaps = 4/220 (2%) Strand=Plus/Plus Query 1 CTTTACAATCCGAA--GACCTTCTTTCACACACGCGGCATTGGCTGGATCAGGCTTTCGC 58 |||||||| | | | | ||||||| ||| |||||| |||| ||||||| ||||||||| Sbjct 1808 CTTTACAAGCGGCATTGCCCTTCTT-CACTCACGCGATATTG-CTGGATCGGGCTTTCGC 1865 Query 59 CCATTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCC 118 ||||||||||| |||||||||||||||| ||||| |||||| || |||||||||||| || Sbjct 1866 CCATTGTCCAAGATTCCCCACTGCTGCCCCCCGTGGGAGTCCGGGCCGTGTCTCAGTCCC 1925 Query 119 AGTGTGACTGATCATCCTCTCAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCT 178 |||||| |||||||||| ||||||| || | ||| | | |||||| |||| |||||| Sbjct 1926 AGTGTGGCTGATCATCCGAAAAGACCAGCTAAGCATCATTGGCTTGGTCAGCCTTTACCT 1985 Query 179 CACCAACTAGCTAATCCGACCTAGGCTCATCTGATAGCGC 218 |||||||| ||||| | || ||||||||| | ||||| Sbjct 1986 GACCAACTACCTAATACTACGCAGGCTCATCAAACAGCGC 2025 >seq748334 Length=307 Score = 206 bits (228), Expect = 6e-51 Identities = 151/173 (87%), Gaps = 2/173 (1%) Strand=Plus/Plus Query 2 TTTACAATCCGAAGACCTTCTTTCACACACGCGGCATTGGCTGGATCAGGCTTTCGCCCA 61 ||||||| |||||| || || | | | |||||||| ||| ||| ||||||||| |||||| Sbjct 137 TTTACAACCCGAAGGCCGTCATCC-CGCACGCGGCGTTG-CTGCATCAGGCTTCCGCCCA 194 Query 62 TTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGT 121 |||| ||| |||||||||||||||||||||||||||||||| |||||||||||| ||||| Sbjct 195 TTGTGCAAAATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAGT 254 Query 122 GTGACTGATCATCCTCTCAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATT 174 ||| |||||||||||||| |||||| ||| |||| |||||||||| ||| ||| Sbjct 255 GTGGCTGATCATCCTCTCGGACCAGCTACTGATCATCGCCTTGGTAAGCTATT 307 >seq1769377 Length=530 Score = 199 bits (220), Expect = 8e-49 Identities = 147/170 (86%), Gaps = 1/170 (1%) Strand=Plus/Plus Query 29 CACGCGGCATTGGCTGGATCAGGCTTTCGCCCATTGTCCAATATTCCCCACTGCTGCCTC 88 |||||||||||| || ||||||||||||||||||| | |||||||||||||||||| Sbjct 42 CACGCGGCATTG-CTCCGTCAGGCTTTCGCCCATTGTAGCAAATTCCCCACTGCTGCCTC 100 Query 89 CCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGACTGATCATCCTCTCAGACCAGTT 148 |||||||||||||| |||||||||||| ||| |||| ||||||||||||| ||| || | Sbjct 101 CCGTAGGAGTCTGGGCCGTGTCTCAGTCCCATTGTGGTTGATCATCCTCTCGGACTAGCT 160 Query 149 ACGGATCGTCGCCTTGGTGAGCCATTACCTCACCAACTAGCTAATCCGAC 198 || |||| || ||||||| ||| ||| ||||||||||||||||||| ||| Sbjct 161 ACTGATCATCTCCTTGGTAAGCTATTGCCTCACCAACTAGCTAATCAGAC 210 >seq614993 Length=211 Score = 196 bits (216), Expect = 1e-47 Identities = 139/158 (88%), Gaps = 1/158 (1%) Strand=Plus/Plus Query 29 CACGCGGCATTGGCTGGATCAGGCTTTCGCCCATTGTCCAATATTCCCCACTGCTGCCTC 88 |||||||||||| || |||||||||||||||||| || ||||||||| |||||||| Sbjct 55 CACGCGGCATTG-CTCCGTCAGGCTTTCGCCCATTGCGGAAAATTCCCCACCGCTGCCTC 113 Query 89 CCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGACTGATCATCCTCTCAGACCAGTT 148 |||||||||||||| |||||||||||| |||||||| |||||||||||||| |||||| | Sbjct 114 CCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCTGATCATCCTCTCGGACCAGCT 173 Query 149 ACGGATCGTCGCCTTGGTGAGCCATTACCTCACCAACT 186 || |||| |||||||||| ||| ||| ||||||||||| Sbjct 174 ACTGATCATCGCCTTGGTAAGCTATTGCCTCACCAACT 211 >seq1484266 Length=243 Score = 192 bits (212), Expect = 1e-46 Identities = 138/158 (87%), Gaps = 1/158 (1%) Strand=Plus/Plus Query 29 CACGCGGCATTGGCTGGATCAGGCTTTCGCCCATTGTCCAATATTCCCCACTGCTGCCTC 88 |||||| ||||| || ||||||||||||||||||| || ||||||||| ||||||| Sbjct 87 CACGCGACATTG-CTCCATCAGGCTTTCGCCCATTGCGGAAAATTCCCCACCACTGCCTC 145 Query 89 CCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGACTGATCATCCTCTCAGACCAGTT 148 |||||||||||||| |||||||||||| |||||||| |||||||||||||| |||||| | Sbjct 146 CCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCTGATCATCCTCTCGGACCAGCT 205 Query 149 ACGGATCGTCGCCTTGGTGAGCCATTACCTCACCAACT 186 || |||| |||||||||| ||| ||| ||||||||||| Sbjct 206 ACTGATCATCGCCTTGGTAAGCTATTGCCTCACCAACT 243 >seq1022886 Length=529 Score = 188 bits (208), Expect = 2e-45 Identities = 133/152 (88%), Gaps = 0/152 (0%) Strand=Plus/Plus Query 47 TCAGGCTTTCGCCCATTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCG 106 ||||||||||| ||||| || ||||||||| |||||||||||||||||||||| ||| Sbjct 330 TCAGGCTTTCGATCATTGCGGAAAATTCCCCACAGCTGCCTCCCGTAGGAGTCTGGGCCG 389 Query 107 TGTCTCAGTTCCAGTGTGACTGATCATCCTCTCAGACCAGTTACGGATCGTCGCCTTGGT 166 ||||||||| | |||||| ||||||||||||||| ||||| ||| |||| |||||||||| Sbjct 390 TGTCTCAGTCCAAGTGTGTCTGATCATCCTCTCAAACCAGCTACTGATCATCGCCTTGGT 449 Query 167 GAGCCATTACCTCACCAACTAGCTAATCCGAC 198 ||| ||| ||||||||||||||||||| ||| Sbjct 450 AAGCTATTCCCTCACCAACTAGCTAATCAGAC 481 >seq128944 Length=1011 Score = 179 bits (198), Expect = 8e-43 Identities = 168/210 (80%), Gaps = 4/210 (2%) Strand=Plus/Minus Query 1 CTTTACAATCCGAA--GACCTTCTTTCACACACGCGGCATTGGCTGGATCAGGCTTTCGC 58 |||||||| | | | | ||||||| ||| |||||| |||| | ||||| |||||| || Sbjct 640 CTTTACAAGCGGCATTGCCCTTCTT-CACTCACGCGATATTG-CAGGATCGGGCTTTTGC 583 Query 59 CCATTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCC 118 ||||||||||| |||||| |||||||| ||||| |||||| || |||||||||||| | Sbjct 582 CCATTGTCCAAGATTCCCTGCTGCTGCCCCCCGTGGGAGTCCGGGCCGTGTCTCAGTCCT 523 Query 119 AGTGTGACTGATCATCCTCTCAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCT 178 |||||| |||||||||| ||||||| || | ||| | | |||||| |||| |||||| Sbjct 522 AGTGTGGCTGATCATCCGAAAAGACCAGCTAAGCATCATTGGCTTGGTCAGCCTTTACCT 463 Query 179 CACCAACTAGCTAATCCGACCTAGGCTCAT 208 |||||||| ||||| | || |||||||| Sbjct 462 GACCAACTACCTAATACTACACAGGCTCAT 433 >seq656910 Length=211 Score = 178 bits (196), Expect = 3e-42 Identities = 116/128 (91%), Gaps = 0/128 (0%) Strand=Plus/Plus Query 71 ATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGACTGAT 130 |||||||||||||||||||||||||||||||| |||||||||||| |||||||| ||||| Sbjct 3 ATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCTGAT 62 Query 131 CATCCTCTCAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCTCACCAACTAGCT 190 ||||||||| |||||| ||| |||| |||||||||| ||| || ||||||||||||||| Sbjct 63 CATCCTCTCGGACCAGCTACTGATCATCGCCTTGGTAAGCTATCGCCTCACCAACTAGCT 122 Query 191 AATCCGAC 198 |||| ||| Sbjct 123 AATCAGAC 130 >seq771549 Length=6473 Score = 161 bits (178), Expect = 2e-37 Identities = 150/189 (79%), Gaps = 2/189 (1%) Strand=Plus/Plus Query 10 CCGAAGACCTTCTTTCACACACGCGGCATTGGCTGGATCAGGCTTTCGCCCATTGTCCAA 69 ||| || ||||| ||| | |||||| |||| || ||||||||||||||| || Sbjct 3127 CCGTAGGCCTTCCTTCTC-CACGCGCAATTG-CTCCGTCAGGCTTTCGCCCANNNCGGAA 3184 Query 70 TATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGACTGA 129 ||||||||||||||||||| ||||||||||| | ||||| ||| | ||| || ||| Sbjct 3185 AATTCCCCACTGCTGCCTCCTTTAGGAGTCTGGGTCATGTCTTAGTCCTAGTATGGTTGA 3244 Query 130 TCATCCTCTCAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCTCACCAACTAGC 189 |||||||||||||||| ||| |||| |||||||| | ||| ||| ||||||||| |||| Sbjct 3245 TCATCCTCTCAGACCATCTACTGATCATCGCCTTGCTAAGCTATTGCCTCACCAAGTAGC 3304 Query 190 TAATCCGAC 198 ||||| ||| Sbjct 3305 TAATCGGAC 3313 >seq142307 Length=895 Score = 159 bits (176), Expect = 7e-37 Identities = 165/211 (78%), Gaps = 5/211 (2%) Strand=Plus/Plus Query 1 CTTTACAATCCGAA--GACCTTCTTTCACACACGCGGCATTGGCTGGATCAGGCTTTCGC 58 |||||||| | | | | ||||||| ||| ||| || |||| |||||| ||||||||| Sbjct 149 CTTTACAAGCGGCATTGCCCTTCTT-CACTCACACGATATTGT-TGGATCGGGCTTTCGC 206 Query 59 CCATTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCC 118 ||||||| ||| |||||||||||||||| ||| | ||| || | |||||||| ||| || Sbjct 207 CCATTGTACAAGATTCCCCACTGCTGCCCCCCATGGGA-TCCGAGCCGTGTCTTAGTCCC 265 Query 119 AGTGTGACTGATCATCCTCTCAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCT 178 |||||| ||||||||| ||||||| || | ||| | | |||||| |||| |||||| Sbjct 266 AGTGTGGCTGATCATCTGAAAAGACCAGCTAAGCATCATTGGCTTGGTCAGCCTTTACCT 325 Query 179 CACCAACTAGCTAATCCGACCTAGGCTCATC 209 |||||||| ||||| | | ||||||||| Sbjct 326 GACCAACTACCTAATACTATGCAGGCTCATC 356 >seq748961 Length=209 Score = 158 bits (174), Expect = 3e-36 Identities = 109/122 (89%), Gaps = 1/122 (1%) Strand=Plus/Minus Query 29 CACGCGGCATTGGCTGGATCAGGCTTTCGCCCATTGTCCAATATTCCCCACTGCTGCCTC 88 |||||||||||| || |||||||||||||||||| || |||||||||||||||||| Sbjct 123 CACGCGGCATTG-CTCCCTCAGGCTTTCGCCCATTGCGGAAAATTCCCCACTGCTGCCTC 65 Query 89 CCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGACTGATCATCCTCTCAGACCAGTT 148 |||||||||||||| |||||||||||| |||||||| |||||||||||||| |||||| | Sbjct 64 CCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCTGATCATCCTCTCGGACCAGCT 5 Query 149 AC 150 || Sbjct 4 AC 3 >seq323673 Length=254 Score = 147 bits (162), Expect = 5e-33 Identities = 114/133 (86%), Gaps = 2/133 (2%) Strand=Plus/Plus Query 17 CCTTCTTTCACACACGCGGCATTGGCTGGATCAGGCTTTCGCCCATTGTCCAATATTCCC 76 ||||||| ||| |||||| |||| ||||||| |||||||||||||||||||| |||||| Sbjct 124 CCTTCTT-CACTCACGCGATATTG-CTGGATCGGGCTTTCGCCCATTGTCCAAGATTCCC 181 Query 77 CACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGACTGATCATCCT 136 |||||||||| ||||| |||||| || |||||||||||| ||||||| |||||||||| Sbjct 182 CACTGCTGCCCCCCGTGGGAGTCCGGGCCGTGTCTCAGTCCCAGTGTAGCTGATCATCCG 241 Query 137 CTCAGACCAGTTA 149 ||||||| || Sbjct 242 AAAAGACCAGCTA 254 >seq869198 Length=227 Score = 138 bits (152), Expect = 2e-30 Identities = 127/157 (81%), Gaps = 4/157 (3%) Strand=Plus/Plus Query 1 CTTTACAATCCGAA--GACCTTCTTTCACACACGCGGCATTGGCTGGATCAGGCTTTCGC 58 |||||||| | | | | ||||||| ||| |||| | ||| ||||||| ||||||||| Sbjct 68 CTTTACAAGCGGCATTGCCCTTCTT-CACTCACGTGATATTA-CTGGATCGGGCTTTCGC 125 Query 59 CCATTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCC 118 ||||||||||| ||||||||||||| || || || |||||| || |||||||||||| || Sbjct 126 CCATTGTCCAAGATTCCCCACTGCTACCCCCTGTGGGAGTCCGGGCCGTGTCTCAGTCCC 185 Query 119 AGTGTGACTGATCATCCTCTCAGACCAGTTACGGATC 155 |||||| |||||||||| ||||||| || | ||| Sbjct 186 AGTGTGGCTGATCATCCGAAAAGACCAGCTAAGCATC 222 >seq163296 Length=707 Score = 129 bits (142), Expect = 1e-27 Identities = 95/111 (86%), Gaps = 0/111 (0%) Strand=Plus/Plus Query 45 GATCAGGCTTTCGCCCATTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGAC 104 |||| ||||||||| |||||||||| |||||||||||||||| ||||| |||||| || | Sbjct 362 GATCGGGCTTTCGCTCATTGTCCAAGATTCCCCACTGCTGCCCCCCGTGGGAGTCCGGGC 421 Query 105 CGTGTCTCAGTTCCAGTGTGACTGATCATCCTCTCAGACCAGTTACGGATC 155 ||||||||||| |||||||| |||||||||| ||||||| || | ||| Sbjct 422 CGTGTCTCAGTCCCAGTGTGGCTGATCATCCGAAAAGACCAGCTAAGCATC 472 >seq757116 Length=2596 Score = 100 bits (110), Expect = 6e-19 Identities = 89/110 (81%), Gaps = 1/110 (1%) Strand=Plus/Minus Query 29 CACGCGGCATTGGCTGGATCAGGCTTTCGCCCATTGTCCAATATTCCCCACTGCTGCCTC 88 |||||||||||| || ||||| ||| ||||||| || |||||||||||||||||| Sbjct 1902 CACGCGGCATTG-CTCCGTCAGGTTTTATCCCATTGCGGAAAATTCCCCACTGCTGCCTC 1844 Query 89 CCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGACTGATCATCCTCT 138 |||||||||| || | ||||||||| ||||||| || | |||||||| Sbjct 1843 ATGTAGGAGTCTCGATCATGTCTCAGTCTCAGTGTGGCTCACCATCCTCT 1794 >seq1762990 Length=1396 Score = 95.1 bits (104), Expect = 3e-17 Identities = 96/124 (77%), Gaps = 1/124 (1%) Strand=Plus/Plus Query 67 CAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGAC 126 ||| |||||| ||| || ||| |||||||| ||| || |||| | | |||||||| | Sbjct 275 CAAAATTCCC-ACTTATGGATCCTGTAGGAGTTTGGGACGCGTCTTAATCCCAGTGTGTC 333 Query 127 TGATCATCCTCTCAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCTCACCAACT 186 ||||||||||||| ||||| ||| | || |||||| ||| ||| ||||||||||| Sbjct 334 TGATCATCCTCTCGGACCAACTACTATCCATCATCTTGGTAAGCTATTTCCTCACCAACT 393 Query 187 AGCT 190 |||| Sbjct 394 AGCT 397 >seq1754125 Length=5422 Score = 91.5 bits (100), Expect = 3e-16 Identities = 90/115 (78%), Gaps = 1/115 (1%) Strand=Plus/Plus Query 84 GCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGACTGATCATCCTCTCAGAC 143 |||||| ||||||| ||| || ||| ||| || | ||| |||||||||||||| || Sbjct 2613 GCCTCCAATAGGAGTTTGGGCCATGTATCATCCCCGGCGTGGATGATCATCCTCTCA-AC 2671 Query 144 CAGTTACGGATCGTCGCCTTGGTGAGCCATTACCTCACCAACTAGCTAATCCGAC 198 || ||| |||| |||| ||||| || || ||||||||||||||||||| ||| Sbjct 2672 CAAATACTGATCATCGCGTTGGTAAGATGTTGCCTCACCAACTAGCTAATCAGAC 2726 >seq629719 Length=265 Score = 89.7 bits (98), Expect = 1e-15 Identities = 76/94 (81%), Gaps = 0/94 (0%) Strand=Plus/Minus Query 255 TATGCGGTATTAGCGTCCGTTTCCGAACGTTATCCCCCACTACCAGGCAGATTCCTAGGC 314 |||||||||||||| |||||||| |||||||||| | | ||||||| |||| || | Sbjct 249 TATGCGGTATTAGCTACCGTTTCCAGTAGTTATCCCCCTCCATCAGGCAGCTTCCCAGAC 190 Query 315 ATTACTCACCCGTCCGCCGCTCTCAAGAGAAGCA 348 |||||||||||||||||| || || |||||| Sbjct 189 ATTACTCACCCGTCCGCCACTAGTCAGCGAAGCA 156 >seq76685 Length=5937 Score = 84.2 bits (92), Expect = 5e-14 Identities = 75/94 (80%), Gaps = 0/94 (0%) Strand=Plus/Plus Query 75 CCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGACTGATCATC 134 ||||||||| ||||| |||||||| | ||| |||||| | |||||| | ||||||||| Sbjct 464 CCCACTGCTAATTCCCGCAGGAGTCTAGGCCGGGTCTCATTCCCAGTGAGGCTGATCATC 523 Query 135 CTCTCAGACCAGTTACGGATCGTCGCCTTGGTGA 168 ||||| |||||| ||| | || |||| | || || Sbjct 524 CTCTCGGACCAGCTACTGCTCATCGCGTAGGAGA 557 >seq3719 Length=11191 Score = 82.4 bits (90), Expect = 2e-13 Identities = 66/80 (83%), Gaps = 0/80 (0%) Strand=Plus/Plus Query 58 CCCATTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTC 117 |||||||| || |||||||||| |||||||||||||||||| | ||||||||||| Sbjct 7154 CCCATTGTGAAAAATTCCCCACTATTGCCTCCCGTAGGAGTCTTGGTCGTGTCTCAGTCT 7213 Query 118 CAGTGTGACTGATCATCCTC 137 ||||| ||||||||||| Sbjct 7214 GAGTGTAGTTGATCATCCTC 7233 >seq793278 Length=2762 Score = 80.6 bits (88), Expect = 6e-13 Identities = 55/62 (89%), Gaps = 0/62 (0%) Strand=Plus/Minus Query 47 TCAGGCTTTCGCCCATTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCG 106 ||| |||||||||||||| || |||||||||||||||||||||||||||||||| | | Sbjct 2642 TCAAGCTTTCGCCCATTGCGGAAAATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCTG 2583 Query 107 TG 108 || Sbjct 2582 TG 2581 >seq749058 Length=240 Score = 80.6 bits (88), Expect = 6e-13 Identities = 71/86 (83%), Gaps = 2/86 (2%) Strand=Plus/Minus Query 2 TTTACAATCCGAAGACCTTCTTTCACACACGCGGCATTGGCTGGATCAGGCTTTCGCCCA 61 ||||| |||||||||||||| | ||| |||||||| ||| || ||||||||||| ||| Sbjct 84 TTTACGATCCGAAGACCTTCAT-CACTCACGCGGCGTTG-CTCCGTCAGGCTTTCGTCCA 27 Query 62 TTGTCCAATATTCCCCACTGCTGCCT 87 ||| || |||||| |||||||||| Sbjct 26 TTGCGGAAGATTCCCTACTGCTGCCT 1 >seq778593 Length=2810 Score = 78.8 bits (86), Expect = 2e-12 Identities = 60/71 (85%), Gaps = 0/71 (0%) Strand=Plus/Minus Query 68 AATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGACT 127 || ||||||||||||| |||||| ||||||||| | |||||||| ||||||| ||| Sbjct 1064 AAAATTCCCCACTGCTACCTCCCATAGGAGTCTAGGCCGTGTCTTCGTTCCAGGGTGGAA 1005 Query 128 GATCATCCTCT 138 ||||||||||| Sbjct 1004 GATCATCCTCT 994 >seq1212657 Length=266 Score = 77.0 bits (84), Expect = 7e-12 Identities = 48/52 (92%), Gaps = 0/52 (0%) Strand=Plus/Minus Query 51 GCTTTCGCCCATTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGG 102 |||||||||||||| || |||||||||||||||||||||||||||||||| Sbjct 266 GCTTTCGCCCATTGCGGAAAATTCCCCACTGCTGCCTCCCGTAGGAGTCTGG 215 >seq151560 Length=1343 Score = 75.2 bits (82), Expect = 2e-11 Identities = 58/69 (84%), Gaps = 0/69 (0%) Strand=Plus/Plus Query 70 TATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGACTGA 129 |||| ||||| ||| ||||| ||||||||| |||| ||||||| | | |||||| |||| Sbjct 729 TATTATCCACTACTGTCTCCCATAGGAGTCTAGACCATGTCTCATTCCAAGTGTGGCTGA 788 Query 130 TCATCCTCT 138 ||||||||| Sbjct 789 TCATCCTCT 797 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1052506537600