Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hordeum_20pubiflorum_20[genbank_20GCA_5F000582825.1_202013-08-30] 1,818,420 sequences; 1,425,274,558 total letters Query= AAMG01001634.1 Length=217 Score E Sequences producing significant alignments: (Bits) Value seq53245 80.6 3e-13 >seq53245 Length=3146 Score = 80.6 bits (88), Expect = 3e-13 Identities = 102/133 (77%), Gaps = 8/133 (6%) Strand=Plus/Plus Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGGGCG 69 ||||||||||||||| || | ||||||||| |||||||||||| | |||| ||| Sbjct 854 AAACCAACAAAATAGAACCG-AGGTCCTATTCCATTATTCCATGCACTAGCATTCAGGCA 912 Query 70 -TA---AGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCTCCGC- 124 || ||||||||| | ||||||||||| |||| |||||||| | || || || | Sbjct 913 ATATCCAGCCTGCTTGAAGCACTCTAATTTGTTCAAAGTAAAAGTGCCGG-CCCACCTCG 971 Query 125 ACAC-CAATGAAG 136 |||| |||||||| Sbjct 972 ACACTCAATGAAG 984 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 584714990280