Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hordeum_20pubiflorum_20[genbank_20GCA_5F000582825.1_202013-08-30]
1,818,420 sequences; 1,425,274,558 total letters
Query= AAMG01002175.1
Length=414
Score E
Sequences producing significant alignments: (Bits) Value
seq1497236 387 3e-105
seq629719 293 6e-77
seq1769377 230 6e-58
seq748334 219 1e-54
seq614993 199 9e-49
seq1484266 196 1e-47
seq748961 183 7e-44
seq854589 170 5e-40
seq1022886 165 2e-38
seq656910 156 1e-35
seq771549 152 1e-34
seq128944 147 5e-33
seq323673 141 2e-31
seq142307 136 9e-30
seq869198 132 1e-28
seq163296 122 2e-25
seq757116 114 3e-23
seq1743223 105 2e-20
seq3719 86.0 2e-14
seq793278 80.6 6e-13
seq778593 78.8 2e-12
seq1212657 77.0 8e-12
>seq1497236
Length=308
Score = 387 bits (428), Expect = 3e-105
Identities = 231/242 (95%), Gaps = 0/242 (0%)
Strand=Plus/Plus
Query 1 GTACTTTACAACCCGAAGGCCTTCTTCATACACGCGGCATGGCTGCATCAGGCTTGCGCC 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 67 GTACTTTACAACCCGAAGGCCTTCTTCATACACGCGGCATGGCTGCATCAGGCTTGCGCC 126
Query 61 CATTGTGCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCA 120
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 127 CATTGTGCAAAATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCA 186
Query 121 GTGTGGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTAGGTGGGCCATTACCCC 180
||||||||||||| |||||||||||||||||||||||||||||||||| ||| |||||||
Sbjct 187 GTGTGGCTGGTCAGCCTCTCAGACCAGCTAGGGATCGTCGCCTAGGTGAGCCGTTACCCC 246
Query 181 GCCAACTAGCTAATCCCATCTGGGTTCATCCGATAGTGAGAGGCCCGAAGGTCCCCCTCT 240
|| |||||||||||||||||||| |||||||| | ||||||||||||||||||||||
Sbjct 247 ACCTACTAGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAAGGTCCCCCTCT 306
Query 241 TT 242
||
Sbjct 307 TT 308
>seq629719
Length=265
Score = 293 bits (324), Expect = 6e-77
Identities = 170/175 (97%), Gaps = 0/175 (0%)
Strand=Plus/Minus
Query 240 TTTGGTCTTGCGACGTTATGCGGTATTAGCCACCGTTTCCAGTGGTTATCCCCCTCCATC 299
|||||||||||||| ||||||||||||||| |||||||||||| ||||||||||||||||
Sbjct 265 TTTGGTCTTGCGACATTATGCGGTATTAGCTACCGTTTCCAGTAGTTATCCCCCTCCATC 206
Query 300 AGGCAGTTTCCCAGACATTACTCACCCGTCCGCCACTCGTCAGCGAAGCAGCAAGCTGCT 359
|||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 205 AGGCAGCTTCCCAGACATTACTCACCCGTCCGCCACTAGTCAGCGAAGCAGCAAGCTGCT 146
Query 360 TCCTGTTACCGTTCGACTTGCATGTGTTAGGCCTGCCGCCAGCGTTCAATCTGAG 414
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 145 TCCTGTTACCGTTCGACTTGCATGTGTTAGGCCTGCCGCCAGCGTTCAATCTGAG 91
>seq1769377
Length=530
Score = 230 bits (254), Expect = 6e-58
Identities = 293/399 (73%), Gaps = 32/399 (8%)
Strand=Plus/Plus
Query 17 AGGCCTTCTTCATACACGCGGCATGGCTGCATCAGGCTTGCGCCCATTGT-GCAATATTC 75
|||||||| | | |||||||||| ||| | |||||||| |||||||||| |||| ||||
Sbjct 28 AGGCCTTCCACCTTCACGCGGCATTGCTCCGTCAGGCTTTCGCCCATTGTAGCAA-ATTC 86
Query 76 CCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGGCTGGTCATC 135
|||||||||||||||||||||||||||| |||||||||||| ||| ||||| || |||||
Sbjct 87 CCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAGTCCCATTGTGGTTGATCATC 146
Query 136 CTCTCAGACCAGCTAGGGATCGTCGCCTAGGTGGGCCATTACCCCGCCAACTAGCTAATC 195
||||| ||| ||||| |||| || ||| ||| || ||| || | ||||||||||||||
Sbjct 147 CTCTCGGACTAGCTACTGATCATCTCCTTGGTAAGCTATTGCCTCACCAACTAGCTAATC 206
Query 196 CCATCTGGGTTCATCCGATAGTGAGAGGCCCGAAGGTCCCCCTCTTTGGTCTTGCGACGT 255
| | | | ||| || | || | | | ||| |||| || | ||
Sbjct 207 AGACGCGAGCCCCTCC----TTGGGCGG------GCTTCTCCT-TTTGCTCCT--CACCC 253
Query 256 TATGCGGTATTAGCCACCGTTTCCAGTGGTTATCCCCCTCCATCAGGCAGTTTCCCAGAC 315
|| | ||||||||| ||| |||||||| ||| | | ||||| ||||| || | |
Sbjct 254 TACGGGGTATTAGCAACCATTTCCAGTTGTTGTTCACCTCCCAAGGGCAGGTTTTTACTC 313
Query 316 ATTACTCACCCGTCCGCCACTCGTCAGCGAAGCAGCAAGCTGCTTCCTGTTACCGTTCGA 375
|||||||||||| ||||||| ||| || || |||| ||||||||
Sbjct 314 GTTACTCACCCGTTCGCCACT------GGAAACACCA-----CTTC------CCGTTCGA 356
Query 376 CTTGCATGTGTTAGGCCTGCCGCCAGCGTTCAATCTGAG 414
||||||||||||| || |||||| |||||||| |||||
Sbjct 357 CTTGCATGTGTTAAGCATGCCGCTAGCGTTCAGCCTGAG 395
>seq748334
Length=307
Score = 219 bits (242), Expect = 1e-54
Identities = 151/171 (88%), Gaps = 0/171 (0%)
Strand=Plus/Plus
Query 5 TTTACAACCCGAAGGCCTTCTTCATACACGCGGCATGGCTGCATCAGGCTTGCGCCCATT 64
||||||||||||||||| || || |||||||| | |||||||||||||| ||||||||
Sbjct 137 TTTACAACCCGAAGGCCGTCATCCCGCACGCGGCGTTGCTGCATCAGGCTTCCGCCCATT 196
Query 65 GTGCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGT 124
|||||| |||||||||||||||||||||||||||||||| |||||||||||| |||||||
Sbjct 197 GTGCAAAATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAGTGT 256
Query 125 GGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTAGGTGGGCCATT 175
||||| |||||||||| ||||||||| |||| |||||| ||| || |||
Sbjct 257 GGCTGATCATCCTCTCGGACCAGCTACTGATCATCGCCTTGGTAAGCTATT 307
>seq614993
Length=211
Score = 199 bits (220), Expect = 9e-49
Identities = 154/183 (84%), Gaps = 0/183 (0%)
Strand=Plus/Plus
Query 5 TTTACAACCCGAAGGCCTTCTTCATACACGCGGCATGGCTGCATCAGGCTTGCGCCCATT 64
|| || ||||| |||||||| | | |||||||||| ||| | |||||||| ||||||||
Sbjct 29 TTGACGACCCGTAGGCCTTCCACCTCCACGCGGCATTGCTCCGTCAGGCTTTCGCCCATT 88
Query 65 GTGCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGT 124
| | || ||||||||| |||||||||||||||||||||| |||||||||||| |||||||
Sbjct 89 GCGGAAAATTCCCCACCGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAGTGT 148
Query 125 GGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTAGGTGGGCCATTACCCCGCCA 184
||||| |||||||||| ||||||||| |||| |||||| ||| || ||| || | |||
Sbjct 149 GGCTGATCATCCTCTCGGACCAGCTACTGATCATCGCCTTGGTAAGCTATTGCCTCACCA 208
Query 185 ACT 187
|||
Sbjct 209 ACT 211
>seq1484266
Length=243
Score = 196 bits (216), Expect = 1e-47
Identities = 153/183 (84%), Gaps = 0/183 (0%)
Strand=Plus/Plus
Query 5 TTTACAACCCGAAGGCCTTCTTCATACACGCGGCATGGCTGCATCAGGCTTGCGCCCATT 64
|| || ||||| |||||||| | | |||||| ||| ||| |||||||||| ||||||||
Sbjct 61 TTGACGACCCGTAGGCCTTCCACCTCCACGCGACATTGCTCCATCAGGCTTTCGCCCATT 120
Query 65 GTGCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGT 124
| | || ||||||||| ||||||||||||||||||||| |||||||||||| |||||||
Sbjct 121 GCGGAAAATTCCCCACCACTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAGTGT 180
Query 125 GGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTAGGTGGGCCATTACCCCGCCA 184
||||| |||||||||| ||||||||| |||| |||||| ||| || ||| || | |||
Sbjct 181 GGCTGATCATCCTCTCGGACCAGCTACTGATCATCGCCTTGGTAAGCTATTGCCTCACCA 240
Query 185 ACT 187
|||
Sbjct 241 ACT 243
>seq748961
Length=209
Score = 183 bits (202), Expect = 7e-44
Identities = 128/146 (88%), Gaps = 0/146 (0%)
Strand=Plus/Minus
Query 5 TTTACAACCCGAAGGCCTTCTTCATACACGCGGCATGGCTGCATCAGGCTTGCGCCCATT 64
|| || ||||| |||||||| | | |||||||||| ||| | |||||||| ||||||||
Sbjct 149 TTGACGACCCGTAGGCCTTCCACCTCCACGCGGCATTGCTCCCTCAGGCTTTCGCCCATT 90
Query 65 GTGCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGT 124
| | || |||||||||||||||||||||||||||||||| |||||||||||| |||||||
Sbjct 89 GCGGAAAATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAGTGT 30
Query 125 GGCTGGTCATCCTCTCAGACCAGCTA 150
||||| |||||||||| |||||||||
Sbjct 29 GGCTGATCATCCTCTCGGACCAGCTA 4
>seq854589
Length=2248
Score = 170 bits (188), Expect = 5e-40
Identities = 154/193 (80%), Gaps = 2/193 (1%)
Strand=Plus/Plus
Query 4 CTTTACAACCCGAA--GGCCTTCTTCATACACGCGGCATGGCTGCATCAGGCTTGCGCCC 61
|||||||| | | | | ||||||||| |||||| || |||| ||| ||||| |||||
Sbjct 1808 CTTTACAAGCGGCATTGCCCTTCTTCACTCACGCGATATTGCTGGATCGGGCTTTCGCCC 1867
Query 62 ATTGTGCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAG 121
||||| ||| |||||||||||||||| ||||| |||||| || |||||||||||| ||||
Sbjct 1868 ATTGTCCAAGATTCCCCACTGCTGCCCCCCGTGGGAGTCCGGGCCGTGTCTCAGTCCCAG 1927
Query 122 TGTGGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTAGGTGGGCCATTACCCCG 181
|||||||| |||||| |||||||||| | ||| | | || ||| ||| |||||
Sbjct 1928 TGTGGCTGATCATCCGAAAAGACCAGCTAAGCATCATTGGCTTGGTCAGCCTTTACCTGA 1987
Query 182 CCAACTAGCTAAT 194
||||||| |||||
Sbjct 1988 CCAACTACCTAAT 2000
>seq1022886
Length=529
Score = 165 bits (182), Expect = 2e-38
Identities = 129/154 (84%), Gaps = 0/154 (0%)
Strand=Plus/Plus
Query 42 GCTGCATCAGGCTTGCGCCCATTGTGCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCT 101
||| | |||||||| || ||||| | || ||||||||| ||||||||||||||||||||
Sbjct 324 GCTCCGTCAGGCTTTCGATCATTGCGGAAAATTCCCCACAGCTGCCTCCCGTAGGAGTCT 383
Query 102 GGACCGTGTCTCAGTTCCAGTGTGGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGC 161
|| |||||||||||| | |||||| ||| ||||||||||| |||||||| |||| ||||
Sbjct 384 GGGCCGTGTCTCAGTCCAAGTGTGTCTGATCATCCTCTCAAACCAGCTACTGATCATCGC 443
Query 162 CTAGGTGGGCCATTACCCCGCCAACTAGCTAATC 195
|| ||| || ||| || | ||||||||||||||
Sbjct 444 CTTGGTAAGCTATTCCCTCACCAACTAGCTAATC 477
>seq656910
Length=211
Score = 156 bits (172), Expect = 1e-35
Identities = 109/124 (88%), Gaps = 0/124 (0%)
Strand=Plus/Plus
Query 72 ATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGGCTGGT 131
|||||||||||||||||||||||||||||||| |||||||||||| |||||||||||| |
Sbjct 3 ATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCTGAT 62
Query 132 CATCCTCTCAGACCAGCTAGGGATCGTCGCCTAGGTGGGCCATTACCCCGCCAACTAGCT 191
||||||||| ||||||||| |||| |||||| ||| || || || | ||||||||||
Sbjct 63 CATCCTCTCGGACCAGCTACTGATCATCGCCTTGGTAAGCTATCGCCTCACCAACTAGCT 122
Query 192 AATC 195
||||
Sbjct 123 AATC 126
>seq771549
Length=6473
Score = 152 bits (168), Expect = 1e-34
Identities = 144/185 (78%), Gaps = 0/185 (0%)
Strand=Plus/Plus
Query 11 ACCCGAAGGCCTTCTTCATACACGCGGCATGGCTGCATCAGGCTTGCGCCCATTGTGCAA 70
||||| |||||||| | | |||||| || ||| | |||||||| |||||| | ||
Sbjct 3125 ACCCGTAGGCCTTCCTTCTCCACGCGCAATTGCTCCGTCAGGCTTTCGCCCANNNCGGAA 3184
Query 71 TATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGGCTGG 130
||||||||||||||||||| ||||||||||| | ||||| ||| | ||| ||| ||
Sbjct 3185 AATTCCCCACTGCTGCCTCCTTTAGGAGTCTGGGTCATGTCTTAGTCCTAGTATGGTTGA 3244
Query 131 TCATCCTCTCAGACCAGCTAGGGATCGTCGCCTAGGTGGGCCATTACCCCGCCAACTAGC 190
|||||||||||||||| ||| |||| |||||| | | || ||| || | |||| ||||
Sbjct 3245 TCATCCTCTCAGACCATCTACTGATCATCGCCTTGCTAAGCTATTGCCTCACCAAGTAGC 3304
Query 191 TAATC 195
|||||
Sbjct 3305 TAATC 3309
>seq128944
Length=1011
Score = 147 bits (162), Expect = 5e-33
Identities = 149/193 (77%), Gaps = 2/193 (1%)
Strand=Plus/Minus
Query 4 CTTTACAACCCGAA--GGCCTTCTTCATACACGCGGCATGGCTGCATCAGGCTTGCGCCC 61
|||||||| | | | | ||||||||| |||||| || || | ||| ||||| ||||
Sbjct 640 CTTTACAAGCGGCATTGCCCTTCTTCACTCACGCGATATTGCAGGATCGGGCTTTTGCCC 581
Query 62 ATTGTGCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAG 121
||||| ||| |||||| |||||||| ||||| |||||| || |||||||||||| | ||
Sbjct 580 ATTGTCCAAGATTCCCTGCTGCTGCCCCCCGTGGGAGTCCGGGCCGTGTCTCAGTCCTAG 521
Query 122 TGTGGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTAGGTGGGCCATTACCCCG 181
|||||||| |||||| |||||||||| | ||| | | || ||| ||| |||||
Sbjct 520 TGTGGCTGATCATCCGAAAAGACCAGCTAAGCATCATTGGCTTGGTCAGCCTTTACCTGA 461
Query 182 CCAACTAGCTAAT 194
||||||| |||||
Sbjct 460 CCAACTACCTAAT 448
>seq323673
Length=254
Score = 141 bits (156), Expect = 2e-31
Identities = 110/131 (84%), Gaps = 0/131 (0%)
Strand=Plus/Plus
Query 20 CCTTCTTCATACACGCGGCATGGCTGCATCAGGCTTGCGCCCATTGTGCAATATTCCCCA 79
||||||||| |||||| || |||| ||| ||||| |||||||||| ||| ||||||||
Sbjct 124 CCTTCTTCACTCACGCGATATTGCTGGATCGGGCTTTCGCCCATTGTCCAAGATTCCCCA 183
Query 80 CTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGGCTGGTCATCCTCT 139
|||||||| ||||| |||||| || |||||||||||| ||||||| |||| ||||||
Sbjct 184 CTGCTGCCCCCCGTGGGAGTCCGGGCCGTGTCTCAGTCCCAGTGTAGCTGATCATCCGAA 243
Query 140 CAGACCAGCTA 150
||||||||||
Sbjct 244 AAGACCAGCTA 254
>seq142307
Length=895
Score = 136 bits (150), Expect = 9e-30
Identities = 157/209 (75%), Gaps = 3/209 (1%)
Strand=Plus/Plus
Query 4 CTTTACAACCCGAA--GGCCTTCTTCATACACGCGGCATGGCTGCATCAGGCTTGCGCCC 61
|||||||| | | | | ||||||||| ||| || || | || ||| ||||| |||||
Sbjct 149 CTTTACAAGCGGCATTGCCCTTCTTCACTCACACGATATTGTTGGATCGGGCTTTCGCCC 208
Query 62 ATTGTGCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAG 121
||||| ||| |||||||||||||||| ||| | ||| || | |||||||| ||| ||||
Sbjct 209 ATTGTACAAGATTCCCCACTGCTGCCCCCCATGGGA-TCCGAGCCGTGTCTTAGTCCCAG 267
Query 122 TGTGGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTAGGTGGGCCATTACCCCG 181
|||||||| ||||| |||||||||| | ||| | | || ||| ||| |||||
Sbjct 268 TGTGGCTGATCATCTGAAAAGACCAGCTAAGCATCATTGGCTTGGTCAGCCTTTACCTGA 327
Query 182 CCAACTAGCTAATCCCATCTGGGTTCATC 210
||||||| ||||| | || || |||||
Sbjct 328 CCAACTACCTAATACTATGCAGGCTCATC 356
>seq869198
Length=227
Score = 132 bits (146), Expect = 1e-28
Identities = 123/155 (79%), Gaps = 2/155 (1%)
Strand=Plus/Plus
Query 4 CTTTACAACCCGAA--GGCCTTCTTCATACACGCGGCATGGCTGCATCAGGCTTGCGCCC 61
|||||||| | | | | ||||||||| |||| | || ||| ||| ||||| |||||
Sbjct 68 CTTTACAAGCGGCATTGCCCTTCTTCACTCACGTGATATTACTGGATCGGGCTTTCGCCC 127
Query 62 ATTGTGCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAG 121
||||| ||| ||||||||||||| || || || |||||| || |||||||||||| ||||
Sbjct 128 ATTGTCCAAGATTCCCCACTGCTACCCCCTGTGGGAGTCCGGGCCGTGTCTCAGTCCCAG 187
Query 122 TGTGGCTGGTCATCCTCTCAGACCAGCTAGGGATC 156
|||||||| |||||| |||||||||| | |||
Sbjct 188 TGTGGCTGATCATCCGAAAAGACCAGCTAAGCATC 222
>seq163296
Length=707
Score = 122 bits (134), Expect = 2e-25
Identities = 93/110 (85%), Gaps = 0/110 (0%)
Strand=Plus/Plus
Query 47 ATCAGGCTTGCGCCCATTGTGCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACC 106
||| ||||| ||| |||||| ||| |||||||||||||||| ||||| |||||| || ||
Sbjct 363 ATCGGGCTTTCGCTCATTGTCCAAGATTCCCCACTGCTGCCCCCCGTGGGAGTCCGGGCC 422
Query 107 GTGTCTCAGTTCCAGTGTGGCTGGTCATCCTCTCAGACCAGCTAGGGATC 156
|||||||||| |||||||||||| |||||| |||||||||| | |||
Sbjct 423 GTGTCTCAGTCCCAGTGTGGCTGATCATCCGAAAAGACCAGCTAAGCATC 472
>seq757116
Length=2596
Score = 114 bits (126), Expect = 3e-23
Identities = 99/123 (80%), Gaps = 0/123 (0%)
Strand=Plus/Minus
Query 17 AGGCCTTCTTCATACACGCGGCATGGCTGCATCAGGCTTGCGCCCATTGTGCAATATTCC 76
|||||||| | | |||||||||| ||| | ||||| || ||||||| | || |||||
Sbjct 1916 AGGCCTTCCACCTCCACGCGGCATTGCTCCGTCAGGTTTTATCCCATTGCGGAAAATTCC 1857
Query 77 CCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGGCTGGTCATCC 136
||||||||||||| |||||||||| || | ||||||||| |||||||||| |||||
Sbjct 1856 CCACTGCTGCCTCATGTAGGAGTCTCGATCATGTCTCAGTCTCAGTGTGGCTCACCATCC 1797
Query 137 TCT 139
|||
Sbjct 1796 TCT 1794
>seq1743223
Length=247
Score = 105 bits (116), Expect = 2e-20
Identities = 125/164 (76%), Gaps = 9/164 (5%)
Strand=Plus/Plus
Query 255 TTATGCGGTATTAGCCACCGTTTCCAGTGGTTATCCCCCTCCATCAGGCAGTTT-CCCAG 313
|||| ||| ||||||| | |||||| | ||||| || || ||| || || ||||
Sbjct 1 TTATCCGGCATTAGCCCCGGTTTCCCGGAGTTATTCCAGTCTTATAGGTAGGTTACCCAC 60
Query 314 ACATTACTCACCCGTCCGCCACT--CGTCAGCGAAGCAGCAAGCTGCTTC-CTGTTACCG 370
||||||||||||||||| || ||||| ||| |||||||| ||| ||||| ||
Sbjct 61 GTGTTACTCACCCGTCCGCCGCTAACGTCA---AAGGAGCAAGCTCCTTATCTGTT--CG 115
Query 371 TTCGACTTGCATGTGTTAGGCCTGCCGCCAGCGTTCAATCTGAG 414
||||||||||||| |||||| |||||||||||||| |||||
Sbjct 116 CTCGACTTGCATGTATTAGGCACGCCGCCAGCGTTCATCCTGAG 159
>seq3719
Length=11191
Score = 86.0 bits (94), Expect = 2e-14
Identities = 67/80 (84%), Gaps = 0/80 (0%)
Strand=Plus/Plus
Query 59 CCCATTGTGCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTC 118
||||||||| || |||||||||| |||||||||||||||||| | |||||||||||
Sbjct 7154 CCCATTGTGAAAAATTCCCCACTATTGCCTCCCGTAGGAGTCTTGGTCGTGTCTCAGTCT 7213
Query 119 CAGTGTGGCTGGTCATCCTC 138
||||| | || ||||||||
Sbjct 7214 GAGTGTAGTTGATCATCCTC 7233
>seq793278
Length=2762
Score = 80.6 bits (88), Expect = 6e-13
Identities = 55/62 (89%), Gaps = 0/62 (0%)
Strand=Plus/Minus
Query 48 TCAGGCTTGCGCCCATTGTGCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCG 107
||| |||| ||||||||| | || |||||||||||||||||||||||||||||||| | |
Sbjct 2642 TCAAGCTTTCGCCCATTGCGGAAAATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCTG 2583
Query 108 TG 109
||
Sbjct 2582 TG 2581
>seq778593
Length=2810
Score = 78.8 bits (86), Expect = 2e-12
Identities = 60/71 (85%), Gaps = 0/71 (0%)
Strand=Plus/Minus
Query 69 AATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGGCT 128
|| ||||||||||||| |||||| ||||||||| | |||||||| ||||||| ||||
Sbjct 1064 AAAATTCCCCACTGCTACCTCCCATAGGAGTCTAGGCCGTGTCTTCGTTCCAGGGTGGAA 1005
Query 129 GGTCATCCTCT 139
| |||||||||
Sbjct 1004 GATCATCCTCT 994
>seq1212657
Length=266
Score = 77.0 bits (84), Expect = 8e-12
Identities = 48/52 (92%), Gaps = 0/52 (0%)
Strand=Plus/Minus
Query 52 GCTTGCGCCCATTGTGCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGG 103
|||| ||||||||| | || ||||||||||||||||||||||||||||||||
Sbjct 266 GCTTTCGCCCATTGCGGAAAATTCCCCACTGCTGCCTCCCGTAGGAGTCTGG 215
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1200171633920
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