Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hordeum_20pubiflorum_20[genbank_20GCA_5F000582825.1_202013-08-30] 1,818,420 sequences; 1,425,274,558 total letters Query= NC_027867.1 Length=651523 Score E Sequences producing significant alignments: (Bits) Value seq4731 84.2 9e-11 >seq4731 Length=10017 Score = 84.2 bits (92), Expect = 9e-11 Identities = 106/146 (73%), Gaps = 0/146 (0%) Strand=Plus/Minus Query 21735 TGGGCGATGCGATCGCCATGCTTGATTTCAAAGTCCTGGTCAGAGTGGTTGAAGAGCACC 21794 || |||| ||| ||||| |||| | | |||||| || |||||||||||||||||| Sbjct 3073 TGTGCGACGCGGTCGCCGGGCTTCACGGCGAAGTCCGCATCCGAGTGGTTGAAGAGCACC 3014 Query 21795 ACCCCGACCTTGCCCCTATAAGAACTGTCGACGACCCCGGCGCCGACGTCGAGCCCGTTC 21854 || || ||| ||| | || ||||| ||||||||||| ||||||| ||| | Sbjct 3013 ACGCCCACCGGGCCGCGGTAGTCGGCGTCGATCACCCCGGCGCCCACGTCGATGGCGTGC 2954 Query 21855 TTCAAGGCCAGACCCGATCTGGGAGC 21880 |||| ||||| ||||| || || || Sbjct 2953 TTCAGCGCCAGGCCCGACCTCGGCGC 2928 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2036171016163960