Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hordeum_20pubiflorum_20[genbank_20GCA_5F000582825.1_202013-08-30] 1,818,420 sequences; 1,425,274,558 total letters Query= NC_031903.1 Length=172345 Score E Sequences producing significant alignments: (Bits) Value seq45179 484 7e-132 seq57095 288 1e-72 seq213450 201 1e-46 seq352821 158 1e-33 seq79754 127 2e-24 seq36335 113 5e-20 seq788035 109 6e-19 seq856698 107 2e-18 seq79039 104 3e-17 seq703676 95.1 1e-14 seq1813671 91.5 2e-13 seq761979 91.5 2e-13 seq50862 87.8 2e-12 >seq45179 Length=9647 Score = 484 bits (536), Expect = 7e-132 Identities = 559/749 (75%), Gaps = 3/749 (0%) Strand=Plus/Minus Query 161788 CAACTTGGGGGACTCTGGAATTTTGTGGCGCTCCACGGGGCTTTCGCTCTGATTGGATTC 161847 ||| | || || || |||| |||||| || |||||||||||||| || || || || ||| Sbjct 9628 CAATTAGGCGGTCTATGGACTTTTGTAGCTCTCCACGGGGCTTTTGCACTAATAGGTTTC 9569 Query 161848 ATGCTTCGTCAGTTTGAACTTGCTCG-TCTTATCGGTATCCGTCCTTACAATGCTATTGC 161906 ||| | || || |||||||||||||| ||| || | | || ||||| ||||| || | Sbjct 9568 ATGTTACGCCAATTTGAACTTGCTCGGTCTGTTCAAT-TGCGGCCTTATAATGCAATCTC 9510 Query 161907 TTTCTCTGGTCCTATTGCTGTTTTTGTCAGCGTCTTTCTCATATATCCTCTGGGACAGTC 161966 ||||||||||| |||||||||||||| || || || || ||||| ||||| || || Sbjct 9509 ATTCTCTGGTCCAATTGCTGTTTTTGTTTCTGTATTCCTTATTTATCCACTGGGGCAATC 9450 Query 161967 GTCCTGGTTCTTCGCGCCATCGTTTGGGGTTGCCGCTATTTTCAGGTTCTTACTTTTCCT 162026 |||||||| ||||| ||||| || || || || || | ||| | |||||| | Sbjct 9449 TGGTTGGTTCTTTGCGCCGAGTTTTGGCGTAGCAGCGATATTTCGATTCATCCTTTTCTT 9390 Query 162027 ACAAGGTTTCCACAATTGGACGCTTAATCCGTTCCACATGATGGGTGTCGCAGGTATCTT 162086 ||||| || || ||||||||| | || || || || |||||||| || || || | || Sbjct 9389 CCAAGGATTTCATAATTGGACGTTGAACCCATTTCATATGATGGGAGTTGCCGGAGTATT 9330 Query 162087 GGGTGGTGCTTTGCTCTCTGCTATTCACGGTGTGACTGTTGAAAACACGCTCTACCAAGA 162146 || | ||| |||| | |||||||| || | || || |||||||| || | | || Sbjct 9329 AGGCGCGGCTCTGCTATGCGCTATTCATGGAGCAACCGTAGAAAACACTCTATTTGAGGA 9270 Query 162147 TGGTGAACAAGCAAATACTTTCAAGGCTTTTGACTCTACGCAAGAGGAGGAGACTTACTC 162206 ||||| |||||||| ||| |||||| || | || |||| || || ||||| || Sbjct 9269 CGGTGATGGTGCAAATACCTTCCGTGCTTTTAACCCAACTCAAGCTGAAGAAACTTATTC 9210 Query 162207 GATGGTTACTGCGAACCGTTTCTGGTCACAGATCTTCGGTATTGCTTTTAGTAATAAGCG 162266 ||||| ||||| ||||| || ||||| || ||||| ||| |||||||| ||||| || Sbjct 9209 AATGGTCACTGCTAACCGCTTTTGGTCCCAAATCTTTGGTGTTGCTTTTTCCAATAAACG 9150 Query 162267 TTGGTTGCATTTCTTTATGCTCTTCGTTCCCGTCATGGGTCTCTGGACAAGTTCTATCGG 162326 |||||| |||||||||||||| || || ||||||| ||| | |||| ||| |||| || Sbjct 9149 TTGGTTACATTTCTTTATGCTATTTGTACCCGTCACCGGTTTATGGATGAGTGCTATTGG 9090 Query 162327 TATTATTGGACTCGCTCTTAATCTTCGTGCTTACGACTTTGTATCTCAGGAGATTCGTGC 162386 | |||| | ||||| || | ||||| || |||||||| || ||||| || ||||| Sbjct 9089 CGTAGTTGGCTTGGCTCTGAACTTACGTGCCTATGACTTTGTTTCCCAGGAAATCCGTGC 9030 Query 162387 AGCGGAGGATCCTGAATTTGAAACCTTCTACACCAAGAATATCCTCTTGAATGAAGGTCT 162446 |||||| |||||||||||||| || ||||||||||| ||||| || || || || ||| | Sbjct 9029 AGCGGAAGATCCTGAATTTGAGACTTTCTACACCAAAAATATTCTTTTAAACGAGGGTAT 8970 Query 162447 TCGTGCATGGTTGGCACCAGTTGATCAACCGCATGAGAACTTTGTATTCCCTGAGGAAGT 162506 |||||| ||| ||||| | ||||| || ||||| || || ||||||||||||| || Sbjct 8969 TCGTGCGTGGATGGCAGCTCAGGATCAGCCTCATGAAAATCTTATATTCCCTGAGGAGGT 8910 Query 162507 TCTGCCTAGAGGTAACGCACTGTGAATGG 162535 ||| || | || ||||| || | ||||| Sbjct 8909 TCTACCACGTGGAAACGCTCT-TTAATGG 8882 >seq57095 Length=8353 Score = 288 bits (318), Expect = 1e-72 Identities = 369/506 (73%), Gaps = 2/506 (0%) Strand=Plus/Minus Query 159803 TTCTGCGAGTGGGTAACTTCTACCAATAACCGCCTCTATGTCGGTTGGTTCGGCGTCCTG 159862 |||||| | ||| ||||| || | || || || || |||| |||||||| || || Sbjct 505 TTCTGCAACTGGATAACTAGCACTGAAAATCGTCTTTACATCGGATGGTTCGGTGTTTTG 446 Query 159863 ATGATCCCAACTCTGTTGGCAGCAACTATCTGC-TTCATCGTCGCCTTCATCGCTGCTCC 159921 |||||||| || | ||| | |||||| |||| || || |||||||||||||||| || Sbjct 445 ATGATCCCTACCTTATTGACCGCAACT-TCTGTATTTATTATCGCCTTCATCGCTGCCCC 387 Query 159922 CCCTGTGGACATCGATGGCATCCGTGAACCCGTCGCTGGTTCACTCATGTACGGTAACAA 159981 || || || || ||||| || ||||| || || ||||||| | | || || ||||| Sbjct 386 TCCAGTAGATATTGATGGTATTCGTGAGCCTGTTTCTGGTTCTTTACTTTATGGAAACAA 327 Query 159982 CATCATCTCTGGTGCAGTTGTTCCCTCTTCCAACGCAATTGGTCTTCACTTCTATCCCAT 160041 || ||||||||||| || |||| |||| || || || | ||||| || || || Sbjct 326 TATTATCTCTGGTGCTATTATTCCTACTTCTGCGGCGATCGGATTGCACTTTTACCCAAT 267 Query 160042 TTGGGAAGCCGCATCGCTCGACGAGTGGCTCTATAACGGTGGTCCTTTCCAACTCGTAGT 160101 ||||||||| ||||| | || |||||| | || || |||||||||| | || | || Sbjct 266 TTGGGAAGCTGCATCTGTTGATGAGTGGTTATACAATGGTGGTCCTTATGAGCTAATTGT 207 Query 160102 CTTCCACTTCCTGATCGGCATCTATGCCTATATGGGTCGTGAGTGGGAACTCTCTTACCG 160161 | |||||| | | || | | ||||||||||||||||||||||| || ||| Sbjct 206 TCTACACTTCTTACTTGGTGTAGCTTGTTATATGGGTCGTGAGTGGGAACTTAGTTTCCG 147 Query 160162 TCTCGGTATGCGTCCCTGGATCTGTGTTGCATACTCTGCTCCAGTCGCTGCTGCTTCTGC 160221 ||| |||||||| || ||||| ||||||||| || ||||| || || |||||| |||| Sbjct 146 TCTGGGTATGCGCCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACTGC 87 Query 160222 TGTATTCCTCGTCTACCCCTTCGGTCAGGGTTCTTTCTCCGATGCTATGCCTCTTGGTAT 160281 ||| ||| | | ||||| | ||||| || || || |||| ||||||| | || || Sbjct 86 TGTTTTCTTGATTTACCCTATTGGTCAAGGAAGCTTTTCTGATGGTATGCCTTTAGGAAT 27 Query 160282 CTCTGGTACTTTTAACTATATGCTTG 160307 |||||||||||| |||| |||| ||| Sbjct 26 CTCTGGTACTTTCAACTTTATGATTG 1 Score = 114 bits (126), Expect = 1e-20 Identities = 174/248 (70%), Gaps = 0/248 (0%) Strand=Plus/Plus Query 161527 GACGACTGGCTTAAACGAGATCGTTTCGTTTTTGTTGGCTGGTCTGGACTTCTTCTTTTT 161586 || |||||| | | | || |||||||||||||| || |||||||| || | || ||| Sbjct 8101 GATGACTGGTTACGAAGGGACCGTTTCGTTTTTGTAGGATGGTCTGGCCTATTGCTCTTT 8160 Query 161587 CCCACTGCTTATCTTGCTATTGGCGGTTGGCTTACTGGCACGACTTTCGCTACGAGCTGG 161646 || ||||||| | ||| | || |||||| |||| || || ||||| | || ||| Sbjct 8161 CCTTGTGCTTATTTCGCTTTAGGGGGTTGGTTTACAGGGACAACTTTTGTAACTTCTTGG 8220 Query 161647 TATACCCATGGACTCGCTAGTTCCTATCTTGAGGGTGCAAATTTTCTTACAGCGGCAGTT 161706 |||||||||||| | || ||||||||| | || ||| ||||| | || || |||||| Sbjct 8221 TATACCCATGGATTGGCAAGTTCCTATTTGGAAGGTTGTAATTTCTTAACCGCAGCAGTT 8280 Query 161707 AGCACTCCAGCTGACGCTATGGGTCATTCTCTTCTTCTTCTCTGGGGTCCTGAGGCTCAA 161766 || || || | | | | || ||| | | || || ||||| || || || ||| Sbjct 8281 TCTACCCCTGCCAATAGTTTAGCACACTCTTTGTTGCTACTATGGGGGCCAGAAGCACAA 8340 Query 161767 GGGGATTT 161774 || ||||| Sbjct 8341 GGAGATTT 8348 >seq213450 Length=3525 Score = 201 bits (222), Expect = 1e-46 Identities = 232/313 (74%), Gaps = 7/313 (2%) Strand=Plus/Plus Query 160215 CTTCTGCTGTATTCCTCGTCTACCCCTTCGGTCAGGGTTCTTTCTCCGATGCTATGCCTC 160274 || ||||||| ||| | | || ||| | ||||| || || || |||| ||||||| Sbjct 3218 CTACTGCTGTTTTCTTGATTTAGCCCATTGGTCAAGGAAACTTTTCTGATGGTATGCCTT 3277 Query 160275 TTGGTATCTCTGGTACTTTTAACTATATGCTTGTATTCCAAGCAGAACACAATATCCTTA 160334 | || |||||||||||||| |||| |||| ||||||| || |||| ||||| ||| ||| Sbjct 3278 TAGGAATCTCTGGTACTTTCAACTTTATGATTGTATTTCAGTCAGAGCACAACATCTTTA 3337 Query 160335 TGCATCCGTTCCACATGCTCGGTGTTGCTGGGGTATTCGGTGGATCTCTGTTCTCTGCTA 160394 |||||| || |||||| | ||||| ||||| ||||||| || || || ||| ||||| Sbjct 3338 TGCATCTATTTCACATGTTAGGTGTAGCTGGTGTATTCGTCGGTTCCCTATTCAATGCTA 3397 Query 160395 TGCATGGATCTCTGGTTACTTCTAGTCTCGTCAGAGAGACGACAGAAACTGAGTCCCAGA 160454 ||||||| || ||| |||| | |||| || || || |||| ||| ||| | Sbjct 3398 TGCATGGTTCCATGG-------TAGTTTGATCAGGGAAACTACTGAAAATGAATCCGCTA 3450 Query 160455 ACTATGGTTACAAGTTCGGTCAAGAGGAAGAGACTTACAACATCGTCGCAGCACATGGCT 160514 | | |||||||| || |||||||||||||||||||| || || || || || ||||| | Sbjct 3451 ATGAGGGTTACAAATTTGGTCAAGAGGAAGAGACTTATAATATTGTGGCTGCTCATGGTT 3510 Query 160515 ACTTCGGTCGTTT 160527 | || || || || Sbjct 3511 ATTTTGGCCGATT 3523 >seq352821 Length=202 Score = 158 bits (174), Expect = 1e-33 Identities = 153/197 (78%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 162310 TGGACAAGTTCTATCGGTATTATTGGACTCGCTCTTAATCTTCGTGCTTACGACTTTGTA 162369 |||| ||| |||| || | |||| | ||||| || | ||||| || |||||||| Sbjct 6 TGGATGAGTGCTATTGGCTTAGTTGGCTTGGCTCTGAACTTACGTGCCTATGACTTTGTT 65 Query 162370 TCTCAGGAGATTCGTGCAGCGGAGGATCCTGAATTTGAAACCTTCTACACCAAGAATATC 162429 || ||||| || ||||||||||| ||||||||||||||||| ||||||||||| ||||| Sbjct 66 TCCCAGGAAATCCGTGCAGCGGAAGATCCTGAATTTGAAACTTTCTACACCAAAAATATT 125 Query 162430 CTCTTGAATGAAGGTCTTCGTGCATGGTTGGCACCAGTTGATCAACCGCATGAGAACTTT 162489 || || || || ||| ||||||| ||| ||||| | ||||| || ||||| || || Sbjct 126 CTTTTAAACGAGGGTATTCGTGCGTGGATGGCAGCTCAGGATCAGCCTCATGAAAATCTT 185 Query 162490 GTATTCCCTGAGGAAGT 162506 ||||||||||||| || Sbjct 186 ATATTCCCTGAGGAGGT 202 >seq79754 Length=5746 Score = 127 bits (140), Expect = 2e-24 Identities = 133/175 (76%), Gaps = 0/175 (0%) Strand=Plus/Plus Query 162149 GTGAACAAGCAAATACTTTCAAGGCTTTTGACTCTACGCAAGAGGAGGAGACTTACTCGA 162208 |||| | |||||||| ||| |||||| || | || |||| || || ||||| || | Sbjct 4785 GTGATGATGCAAATACCTTCCGTGCTTTTAACCCAACTCAAGCTGAAGAAACTTATTCAA 4844 Query 162209 TGGTTACTGCGAACCGTTTCTGGTCACAGATCTTCGGTATTGCTTTTAGTAATAAGCGTT 162268 |||| ||||| |||||||| ||||| || ||||| | | |||||||| ||||| ||| Sbjct 4845 TGGTCACTGCTAACCGTTTTTGGTCCCAAATCTTTGATGTTGCTTTTTCCAATAAATGTT 4904 Query 162269 GGTTGCATTTCTTTATGCTCTTCGTTCCCGTCATGGGTCTCTGGACAAGTTCTAT 162323 |||| |||||||||||||| || || | ||||| ||| | |||| ||| |||| Sbjct 4905 GGTTACATTTCTTTATGCTATTTGTACTCGTCACTGGTTTATGGATGAGTGCTAT 4959 >seq36335 Length=20465 Score = 113 bits (124), Expect = 5e-20 Identities = 100/125 (80%), Gaps = 0/125 (0%) Strand=Plus/Minus Query 160235 TACCCCTTCGGTCAGGGTTCTTTCTCCGATGCTATGCCTCTTGGTATCTCTGGTACTTTT 160294 ||||| | ||||| || || || |||| ||||| | | || ||||| |||||||| Sbjct 3521 TACCCTATTGGTCAAGGAAGCTTTTCTGATGGTATGCTTTTAGGAATCTCCGGTACTTTC 3462 Query 160295 AACTATATGCTTGTATTCCAAGCAGAACACAATATCCTTATGCATCCGTTCCACATGCTC 160354 |||| |||| |||||||||| ||||| ||||| |||||||||||||| ||||||||| | Sbjct 3461 AACTTTATGATTGTATTCCAGGCAGAGCACAACATCCTTATGCATCCATTCCACATGTTA 3402 Query 160355 GGTGT 160359 ||||| Sbjct 3401 GGTGT 3397 >seq788035 Length=1366 Score = 109 bits (120), Expect = 6e-19 Identities = 101/128 (79%), Gaps = 0/128 (0%) Strand=Plus/Plus Query 160459 TGGTTACAAGTTCGGTCAAGAGGAAGAGACTTACAACATCGTCGCAGCACATGGCTACTT 160518 ||||||||| || |||||||||||||| ||||| ||||| || || || |||| || | Sbjct 957 TGGTTACAAATTTGGTCAAGAGGAAGAAACTTATAACATTGTGGCTGCTAATGGTTATAT 1016 Query 160519 CGGTCGTTTGATCTTCCAATATGCATCCTTTAACAACTCACGCTCTCTGCACTTCTTCCT 160578 || | || |||||||||||||| ||||||||||| || ||| | ||||||||| | Sbjct 1017 TGGCCAATTAATCTTCCAATATGCTAGTTTTAACAACTCTCGTTCTTTACACTTCTTCTT 1076 Query 160579 CGCTGCTT 160586 ||||||| Sbjct 1077 GGCTGCTT 1084 >seq856698 Length=257 Score = 107 bits (118), Expect = 2e-18 Identities = 113/149 (76%), Gaps = 0/149 (0%) Strand=Plus/Plus Query 160646 AATGGTTTCAACTTCAACCAGTCCATCTTGGACAACCAAGGACAAGTTCTGAACACTTGG 160705 ||||||||||| |||||||| || | | || | ||||| | ||| | || |||||| Sbjct 3 AATGGTTTCAATTTCAACCAATCTGTAGTTGATAGTCAAGGTCGCGTTATTAATACTTGG 62 Query 160706 GCAGACGTGCTTAACCGCGCTGGTCTGGGCATGGAAGTCATGCACGAGCGTAACGCTCAC 160765 || || | | ||||| ||| || || |||||||| ||||| || ||||| |||||| Sbjct 63 GCTGATATCATCAACCGTGCTAACCTTGGTATGGAAGTAATGCATGAACGTAATGCTCAC 122 Query 160766 AACTTCCCTCTCGACCTTGCTGCTGCTGA 160794 ||||||||||| ||| | ||||||| ||| Sbjct 123 AACTTCCCTCTAGACTTAGCTGCTGTTGA 151 >seq79039 Length=6720 Score = 104 bits (114), Expect = 3e-17 Identities = 121/162 (75%), Gaps = 1/162 (1%) Strand=Plus/Minus Query 162374 AGGAGATTCGTGCAGCGGAGGATCCTGAATTTGAAACCTTCTACACCAAGAATATCCTCT 162433 |||| || |||||||||| |||||||||||| | || ||||||| ||| ||||| | | Sbjct 4440 AGGAAATCTGTGCAGCGGAAGATCCTGAATTTAAGACTTTCTACATCAAAAATATTATTT 4381 Query 162434 TGAATGAAGGTCTTCGTGCATGGTTGGCACCAGTTGATCAACCGCATGAGAACTTTGTAT 162493 | || || | | ||| ||| ||| ||||| | ||||| || ||||| || || ||| Sbjct 4380 TAAACGAGGATATTCATGCGTGGATGGCAGCTCAGGATCAGCCTCATGAAAATCTTATAT 4321 Query 162494 TCCCTGAGGAAGTTCTGCCTAGAGGTAACGCACTGTGAATGG 162535 |||||||||| ||||| | | || ||||| || | ||||| Sbjct 4320 TCCCTGAGGAGGTTCTATCATGTGGAAACGCTCT-TTAATGG 4280 >seq703676 Length=206 Score = 95.1 bits (104), Expect = 1e-14 Identities = 97/127 (76%), Gaps = 0/127 (0%) Strand=Plus/Minus Query 160364 GGGGTATTCGGTGGATCTCTGTTCTCTGCTATGCATGGATCTCTGGTTACTTCTAGTCTC 160423 || |||||||| | || || ||| |||||||||||| || |||| || |||||| | Sbjct 127 GGTGTATTCGGCGATTCCCTATTCAGTGCTATGCATGGTTCCTTGGTAACCTCTAGTTTG 68 Query 160424 GTCAGAGAGACGACAGAAACTGAGTCCCAGAACTATGGTTACAAGTTCGGTCAAGAGGAA 160483 |||| || || || |||| ||| ||| || | |||||||| || |||||||||||| Sbjct 67 ATCAGGGAAACTACTGAAAATGAATCCGCTAATGAGGGTTACAAATTTGGTCAAGAGGAA 8 Query 160484 GAGACTT 160490 ||||||| Sbjct 7 GAGACTT 1 >seq1813671 Length=280 Score = 91.5 bits (100), Expect = 2e-13 Identities = 86/110 (78%), Gaps = 0/110 (0%) Strand=Plus/Plus Query 160130 TATATGGGTCGTGAGTGGGAACTCTCTTACCGTCTCGGTATGCGTCCCTGGATCTGTGTT 160189 ||||||||||||||| ||||| | || |||||| |||||||| || ||||| |||| Sbjct 56 TATATGGGTCGTGAGCGGGAATTTAGTTTCCGTCTGGGTATGCGCCCTTGGATTGTTGTT 115 Query 160190 GCATACTCTGCTCCAGTCGCTGCTGCTTCTGCTGTATTCCTCGTCTACCC 160239 ||||| || |||| || || |||||| ||||||| ||| | | ||||| Sbjct 116 GCATATTCAGCTCTTGTTGCAGCTGCTACTGCTGTTTTCTTGATTTACCC 165 >seq761979 Length=10221 Score = 91.5 bits (100), Expect = 2e-13 Identities = 151/218 (69%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 159977 AACAACATCATCTCTGGTGCAGTTGTTCCCTCTTCCAACGCAATTGGTCTTCACTTCTAT 160036 ||||| || ||||||||||| || |||| |||| | | || | ||||| || Sbjct 430 AACAATATTATCTCTGGTGCTATTATTCCTACTTCGACGGTGATCAAATTGCACTTTTAC 371 Query 160037 CCCATTTGGGAAGCCGCATCGCTCGACGAGTGGCTCTATAACGGTGGTCCTTTCCAACTC 160096 || ||||| ||| |||||| | || |||||| | || || |||||||||| | || Sbjct 370 CCAATTTGAAAAGTTGCATCGGTTGATGAGTGGTTATACAATGGTGGTCCTTATGAGCTA 311 Query 160097 GTAGTCTTCCACTTCCTGATCGGCATCTATGCCTATATGGGTCGTGAGTGGGAACTCTCT 160156 | | || |||||| | | || | | ||||||||| |||||| |||||| | Sbjct 310 ATTTTTTTACACTTCTTACTTGGTGTAGCTTGTTATATGGGTTGTGAGTAGGAACTTAGT 251 Query 160157 TACCGTCTCGGTATGCGTCCCTGGATCTGTGTTGCATA 160194 | |||||| ||||||| ||| || || ||||||||| Sbjct 250 TTCCGTCTGGGTATGCATCCTTGAATTGTTGTTGCATA 213 >seq50862 Length=22782 Score = 87.8 bits (96), Expect = 2e-12 Identities = 92/120 (77%), Gaps = 1/120 (1%) Strand=Plus/Minus Query 162340 GCTCTTAATCTTCGTGCTTACGACTTTGTATCTCAGGAGATTCGTGCAGCGGAGGATCCT 162399 ||||| || | |||| || |||||| | || |||| || |||||||||| |||||| Sbjct 1260 GCTCTGAACATGCGTGTCTATGACTTTATTTCCAAGGAAATCTGTGCAGCGGAAGATCCT 1201 Query 162400 GAATTTGAAACCTTCTACACCAAGAATATCCTCTTGAATGAAGGTCTTCGTGCATGGTTG 162459 ||||||| || || |||| ||| ||||| || || || ||||| ||||||||||| || Sbjct 1200 AAATTTGATACTTTATACAACAAAAATATTCTTTTAAAC-AAGGTATTCGTGCATGGATG 1142 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 538843085676000