Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hordeum_20vulgare_20subsp._20vulgare_20[genbank_20GCA_5F000326125.1_
202012-11-15] 2,077,901 sequences; 1,779,486,241 total letters
Query= AAMG01000345.1
Length=193
Score E
Sequences producing significant alignments: (Bits) Value
seq2008734 132 5e-29
>seq2008734
Length=439
Score = 132 bits (146), Expect = 5e-29
Identities = 148/194 (76%), Gaps = 4/194 (2%)
Strand=Plus/Plus
Query 2 TACCTGAAGCTTAGAAGCTTTTCTTGGAAGCATGGCATCAACCACTTCGTCATCTAAAAG 61
|| |||||||||||| ||||||||||||| |||| |||| ||||||| | || |||
Sbjct 122 TAACTGAAGCTTAGAGACTTTTCTTGGAAGTATGGTATCAGCCACTTCAC--TGTACAAG 179
Query 62 -ATAACTCGTCATCAGCTCCCGGCCTT-AGAATCCCGGATTTACCTAAGATTCCAGCCTA 119
| | || | ||| ||| | || | || | ||||||||| |||||||| | |||||
Sbjct 180 TACAGCTTGATATCGACTCTCAGCATAGAGCACCCCGGATTTGCCTAAGATGCATGCCTA 239
Query 120 CCACCTTAAACTTGGACAACCAACGCCAAGCTGGCCTAGCCTTCTCCGTCCCTCCATCGC 179
| ||| || |||||||||||||||| |||| | || |||||||||||| ||||||
Sbjct 240 CTGTCTTCCACCTGGACAACCAACGCCAGGCTGACTTAACCTTCTCCGTCCTCTCATCGC 299
Query 180 ATTAACCAGAAGTA 193
|||| ||||||||
Sbjct 300 ATTACACAGAAGTA 313
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 507964781178
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