Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hordeum_20vulgare_20subsp._20vulgare_20[genbank_20GCA_5F000326125.1_ 202012-11-15] 2,077,901 sequences; 1,779,486,241 total letters Query= AAMG01000345.1 Length=193 Score E Sequences producing significant alignments: (Bits) Value seq2008734 132 5e-29 >seq2008734 Length=439 Score = 132 bits (146), Expect = 5e-29 Identities = 148/194 (76%), Gaps = 4/194 (2%) Strand=Plus/Plus Query 2 TACCTGAAGCTTAGAAGCTTTTCTTGGAAGCATGGCATCAACCACTTCGTCATCTAAAAG 61 || |||||||||||| ||||||||||||| |||| |||| ||||||| | || ||| Sbjct 122 TAACTGAAGCTTAGAGACTTTTCTTGGAAGTATGGTATCAGCCACTTCAC--TGTACAAG 179 Query 62 -ATAACTCGTCATCAGCTCCCGGCCTT-AGAATCCCGGATTTACCTAAGATTCCAGCCTA 119 | | || | ||| ||| | || | || | ||||||||| |||||||| | ||||| Sbjct 180 TACAGCTTGATATCGACTCTCAGCATAGAGCACCCCGGATTTGCCTAAGATGCATGCCTA 239 Query 120 CCACCTTAAACTTGGACAACCAACGCCAAGCTGGCCTAGCCTTCTCCGTCCCTCCATCGC 179 | ||| || |||||||||||||||| |||| | || |||||||||||| |||||| Sbjct 240 CTGTCTTCCACCTGGACAACCAACGCCAGGCTGACTTAACCTTCTCCGTCCTCTCATCGC 299 Query 180 ATTAACCAGAAGTA 193 |||| |||||||| Sbjct 300 ATTACACAGAAGTA 313 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 507964781178