Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hordeum_20vulgare_20subsp._20vulgare_20[genbank_20GCA_5F000326125.1_
202012-11-15] 2,077,901 sequences; 1,779,486,241 total letters
Query= AAMG01000383.1
Length=435
Score E
Sequences producing significant alignments: (Bits) Value
seq94780 179 9e-43
seq795743 170 5e-40
seq77026 158 3e-36
seq817092 125 2e-26
seq832032 120 8e-25
seq1508883 111 4e-22
seq1123124 93.3 1e-16
seq1441153 84.2 6e-14
seq59074 84.2 6e-14
seq831958 82.4 2e-13
seq829586 82.4 2e-13
seq1212451 77.0 8e-12
seq165799 75.2 3e-11
>seq94780
Length=20738
Score = 179 bits (198), Expect = 9e-43
Identities = 230/314 (73%), Gaps = 10/314 (3%)
Strand=Plus/Minus
Query 28 CTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGCAAGCGTTAATCGGAATTACTGGGCG 87
|| |||||||||||||||||||| ||| ||| ||||| ||| ||||||| ||||||||
Sbjct 20738 CTCCGTGCCAGCAGCCGCGGTAAGACGGGGGGGGCAAGTGTTCTTCGGAATGACTGGGCG 20679
Query 88 TAAAGCGTGCGCAGGCGGT---TGTGTAAGACAGGTGTGAAATCCCCGGGCTTAACCTGG 144
||||| | || ||||||| | | || || ||||| | | | || |||
Sbjct 20678 TAAAGGGCACGTAGGCGGTGAATCGGGTTGAAAG---TGAAAGTCGC---CAAAAAGTGG 20625
Query 145 -GAATTGCATTTGTGACTGCACGACTAGAGTGTGTCAGAGGGGGGTGGAATTCCACGTGT 203
| | ||| | | || ||| ||||| | |||||| | |||||||| | ||||
Sbjct 20624 CGGAATGCTCTCGAAACCAATTCACTTGAGTGAGACAGAGGAGAGTGGAATTTCGTGTGT 20565
Query 204 AGCAGTGAAATGCGTAGATATGTGGAGGAACACCAATGGCGAAGGCAGCCCCCTGGGATA 263
|| ||||||| ||||||| | | |||||| |||| ||||||||||| | |||||
Sbjct 20564 AGGGGTGAAATCCGTAGATCTACGAAGGAACGCCAAAAGCGAAGGCAGCTCTCTGGGTCC 20505
Query 264 ACACTGACGCTCATGCACGAAAGCGTGGGGAGCAAACAGGATTAGATACCCTGGTAGTCC 323
|| |||||| | ||||||| |||||||| ||||||||||||||||||||||||||
Sbjct 20504 CTACCGACGCTGGGGTGCGAAAGCATGGGGAGCGAACAGGATTAGATACCCTGGTAGTCC 20445
Query 324 ACGCCCTAAACGAT 337
| ||| ||||||||
Sbjct 20444 ATGCCGTAAACGAT 20431
>seq795743
Length=230
Score = 170 bits (188), Expect = 5e-40
Identities = 141/172 (82%), Gaps = 0/172 (0%)
Strand=Plus/Plus
Query 166 GACTAGAGTGTGTCAGAGGGGGGTGGAATTCCACGTGTAGCAGTGAAATGCGTAGATATG 225
|||||||||| | || || | ||||||||| ||||||| ||| |||||| ||||||
Sbjct 24 GACTAGAGTGCGGTAGGGGAGATTGGAATTCCTGGTGTAGCGGTGGAATGCGCAGATATC 83
Query 226 TGGAGGAACACCAATGGCGAAGGCAGCCCCCTGGGATAACACTGACGCTCATGCACGAAA 285
||||||||||| ||||||||||||| | ||||| ||||||||| | | |||||
Sbjct 84 AGGAGGAACACCGATGGCGAAGGCAGATCTCTGGGCCGTAACTGACGCTGAGGAGCGAAA 143
Query 286 GCGTGGGGAGCAAACAGGATTAGATACCCTGGTAGTCCACGCCCTAAACGAT 337
| |||||||||||||||| ||||||||||||||||||||| || ||||||||
Sbjct 144 GGGTGGGGAGCAAACAGGCTTAGATACCCTGGTAGTCCACCCCGTAAACGAT 195
>seq77026
Length=2228
Score = 158 bits (174), Expect = 3e-36
Identities = 243/341 (71%), Gaps = 17/341 (5%)
Strand=Plus/Plus
Query 4 ACCTGAAGAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGCA 63
|| ||| ||| |||| |||||||||| |||||||||||| ||||||| ||| |||
Sbjct 638 ACTTGAGGAAGAAGCCCCGGCTAACTCCGTGCCAGCAGCAGCGGTAAGACGGGGGGG--- 694
Query 64 AGCGTTAATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGG----TTGTGTAAGACAGG 119
|| ||| ||||||| ||||||||||||| | || |||||| | | ||| || ||
Sbjct 695 AGTGTTCTTCGGAATGACTGGGCGTAAAGGGCACGTAGGCGGCGAATCGGGTA-GAAAG- 752
Query 120 TGTGAAATCCCCGGGCTTAACCTG--GGAATTGCATTTGTGACTGCACGACTAGAGTGTG 177
||||| | | | || || ||||| || | | || ||| ||||| |
Sbjct 753 --TGAAAGTC---GTCAAAAAGTGTCGGAAT-GCTCTCGAAACCAATTCACTTGAGTGAG 806
Query 178 TCAGAGGGGGGTGGAATTCCACGTGTAGCAGTGAAATGCGTAGATATGTGGAGGAACACC 237
|||| |||||||| || ||||| ||||||| ||||||| | | |||||| ||
Sbjct 807 ATTGAGGAAAGTGGAATTTCATCTGTAGGGGTGAAATCCGTAGATTTACGAAGGAACGCC 866
Query 238 AATGGCGAAGGCAGCCCCCTGGGATAACACTGACGCTCATGCACGAAAGCGTGGGGAGCA 297
|| ||||||||| | | || | || |||||| | ||||||| ||||||||
Sbjct 867 AAAAGCGAAGGCAACTCTGTGAGTCCCTACAGACGCTGGGGTGCGAAAGCATGGGGAGCG 926
Query 298 AACAGGATTAGATACCCTGGTAGTCCACGCCCTAAACGATA 338
||||||||||||||||||||||||||| ||| |||| ||||
Sbjct 927 AACAGGATTAGATACCCTGGTAGTCCATGCCGTAAATGATA 967
>seq817092
Length=212
Score = 125 bits (138), Expect = 2e-26
Identities = 111/139 (80%), Gaps = 0/139 (0%)
Strand=Plus/Minus
Query 3 TACCTGAAGAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGC 62
|| |||| ||||||||| ||||||||| ||||||||||||||||||| || ||| |||
Sbjct 149 TATCTGAGGAATAAGCATCGGCTAACTCGGTGCCAGCAGCCGCGGTAAGACAGAGGATGC 90
Query 63 AAGCGTTAATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGTTGTGTAAGACAGGTGT 122
|||||||| |||||| | |||||||||||||| | ||| || | | ||| | | ||
Sbjct 89 AAGCGTTATCCGGAATGATTGGGCGTAAAGCGTCTGTAGGTGGCTTTTCAAGTCCGCCGT 30
Query 123 GAAATCCCCGGGCTTAACC 141
||||||| ||||| ||||
Sbjct 29 CAAATCCCAGGGCTCAACC 11
>seq832032
Length=212
Score = 120 bits (132), Expect = 8e-25
Identities = 110/139 (79%), Gaps = 0/139 (0%)
Strand=Plus/Plus
Query 3 TACCTGAAGAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGC 62
|| |||| ||||||||| ||||||||| ||||||||||||||||||| || ||| |||
Sbjct 64 TATCTGAGGAATAAGCATCGGCTAACTCAGTGCCAGCAGCCGCGGTAAGACAGAGGATGC 123
Query 63 AAGCGTTAATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGTTGTGTAAGACAGGTGT 122
|||||||| |||||| | |||||||||||||| | ||| || | | ||| | | ||
Sbjct 124 AAGCGTTATCCGGAATGATTGGGCGTAAAGCGTCTGTAGGTGGCTTTTCAAGTCCGCCGT 183
Query 123 GAAATCCCCGGGCTTAACC 141
||||||| |||| ||||
Sbjct 184 CAAATCCCAAGGCTCAACC 202
>seq1508883
Length=202
Score = 111 bits (122), Expect = 4e-22
Identities = 103/131 (79%), Gaps = 0/131 (0%)
Strand=Plus/Minus
Query 6 CTGAAGAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGCAAG 65
|||| ||||||||| ||||||||| ||||||||||||||||||| || ||| ||||||
Sbjct 200 CTGAGGAATAAGCATCGGCTAACTCTGTGCCAGCAGCCGCGGTAAGACAGAGGATGCAAG 141
Query 66 CGTTAATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGTTGTGTAAGACAGGTGTGAA 125
||||| |||||| | || |||||||| ||| | || || | | ||| | | || ||
Sbjct 140 CGTTATCCGGAATGATTGTGCGTAAAGAGTGTGTCGGTGGCTTTTCAAGTCCGTCGTAAA 81
Query 126 ATCCCCGGGCT 136
||||| |||||
Sbjct 80 ATCCCAGGGCT 70
>seq1123124
Length=2189
Score = 93.3 bits (102), Expect = 1e-16
Identities = 71/84 (85%), Gaps = 0/84 (0%)
Strand=Plus/Minus
Query 6 CTGAAGAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGCAAG 65
|||| ||||||||| ||||||||| |||||||| |||||||||| || ||| ||||||
Sbjct 2188 CTGAGGAATAAGCATCGGCTAACTCTGTGCCAGCTGCCGCGGTAAGACAGAGGATGCAAG 2129
Query 66 CGTTAATCGGAATTACTGGGCGTA 89
||||| |||||| | ||||||||
Sbjct 2128 CGTTATCCGGAATGATTGGGCGTA 2105
>seq1441153
Length=262
Score = 84.2 bits (92), Expect = 6e-14
Identities = 91/121 (75%), Gaps = 0/121 (0%)
Strand=Plus/Plus
Query 21 CGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGCAAGCGTTAATCGGAATTA 80
||||||||| |||||| ||||| |||||| || ||| ||||||||||| | |||| |
Sbjct 101 CGGCTAACTCTGTGCCACCAGCCTCGGTAAGACAGAGGATGCAAGCGTTATCCAGAATGA 160
Query 81 CTGGGCGTAAAGCGTGCGCAGGCGGTTGTGTAAGACAGGTGTGAAATCCCCGGGCTTAAC 140
|||||||||||| | | ||| || | | ||| | | || ||||||| |||| |||
Sbjct 161 TTGGGCGTAAAGCATTTGTAGGTGGCTTTTCAAGTCCGCCGTCAAATCCCATGGCTCAAC 220
Query 141 C 141
|
Sbjct 221 C 221
>seq59074
Length=14123
Score = 84.2 bits (92), Expect = 6e-14
Identities = 64/76 (84%), Gaps = 0/76 (0%)
Strand=Plus/Minus
Query 8 GAAGAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGCAAGCG 67
|| ||| |||| |||||||||| |||||||||||||||||||| ||| ||| ||||| |
Sbjct 76 GAGGAAGAAGCCCCGGCTAACTCCGTGCCAGCAGCCGCGGTAAGACGGGGGGGGCAAGTG 17
Query 68 TTAATCGGAATTACTG 83
|| ||||||| ||||
Sbjct 16 TTCTTCGGAATGACTG 1
>seq831958
Length=214
Score = 82.4 bits (90), Expect = 2e-13
Identities = 111/150 (74%), Gaps = 6/150 (4%)
Strand=Plus/Minus
Query 264 ACACTGACGCTCATGCACGAAAGCGTGGGGAGCAAACAGGATTAGATACCCTGGTAGTCC 323
|||||||| || | |||||||| |||||||||| |||||||| |||| |||||||
Sbjct 209 ACACTGACACTGAGAGACGAAAGCTAGGGGAGCAAATGGGATTAGAGACCCCAGTAGTCC 150
Query 324 ACGCCCTAAACGATATCAACTAGTTGTTGGG-GATTT-ACTTCCTTG--GTAACGTAGCT 379
||| |||||||| ||||| || || | || | || || || || ||||||
Sbjct 149 TAGCCGTAAACGATCGATACTAGGTGCTGTGCGACTCGAC--CCGTGCAGTGCTGTAGCT 92
Query 380 AACGCGTGAAGTTGACCGCCTGGGGAATAC 409
||||||| |||| ||||||||||| |||
Sbjct 91 AACGCGTTAAGTATCCCGCCTGGGGAGTAC 62
>seq829586
Length=214
Score = 82.4 bits (90), Expect = 2e-13
Identities = 111/150 (74%), Gaps = 6/150 (4%)
Strand=Plus/Plus
Query 264 ACACTGACGCTCATGCACGAAAGCGTGGGGAGCAAACAGGATTAGATACCCTGGTAGTCC 323
|||||||| || | |||||||| |||||||||| |||||||| |||| |||||||
Sbjct 6 ACACTGACACTGAGAGACGAAAGCTAGGGGAGCAAATGGGATTAGAGACCCCAGTAGTCC 65
Query 324 ACGCCCTAAACGATATCAACTAGTTGTTGGG-GATTT-ACTTCCTTG--GTAACGTAGCT 379
||| |||||||| ||||| || || | || | || || || || ||||||
Sbjct 66 TAGCCGTAAACGATTGATACTAGGTGCTGTGCGACTCGAC--CCGTGCAGTGCTGTAGCT 123
Query 380 AACGCGTGAAGTTGACCGCCTGGGGAATAC 409
||||||| |||| ||||||||||| |||
Sbjct 124 AACGCGTTAAGTATCCCGCCTGGGGAGTAC 153
>seq1212451
Length=387
Score = 77.0 bits (84), Expect = 8e-12
Identities = 82/109 (75%), Gaps = 7/109 (6%)
Strand=Plus/Plus
Query 8 GAAGAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTG------ 61
|| ||| |||| |||||||||| |||||||| |||||||||| ||| ||||
Sbjct 118 GAGGAAGAAGCCCCGGCTAACTCCGTGCCAGTAGCCGCGGTATGACGGGCGGTGGGGCGG 177
Query 62 -CAAGCGTTAATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGTTGT 109
|||| ||| ||||||| ||||||||||||| | || ||| |||||
Sbjct 178 GCAAGTGTTCTTCGGAATGACTGGGCGTAAAGGGCACGTAGGACGTTGT 226
>seq165799
Length=1184
Score = 75.2 bits (82), Expect = 3e-11
Identities = 58/69 (84%), Gaps = 0/69 (0%)
Strand=Plus/Minus
Query 15 AAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGCAAGCGTTAATCG 74
|||| |||||||||| |||||||||||||||||||| || ||| ||||| ||| |||
Sbjct 217 AAGCCCCGGCTAACTCCGTGCCAGCAGCCGCGGTAAGACAGGGGGGGCAAGTGTTCTTCG 158
Query 75 GAATTACTG 83
|||| ||||
Sbjct 157 GAATGACTG 149
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1262803388704
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