Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hordeum_20vulgare_20subsp._20vulgare_20[genbank_20GCA_5F000326125.1_
202012-11-15] 2,077,901 sequences; 1,779,486,241 total letters
Query= AAMG01001151.1
Length=269
Score E
Sequences producing significant alignments: (Bits) Value
seq51278 224 1e-56
>seq51278
Length=220
Score = 224 bits (248), Expect = 1e-56
Identities = 188/226 (83%), Gaps = 17/226 (8%)
Strand=Plus/Plus
Query 39 CGGCCCCTTCGCCCTTCGGGCAGTTCGGGCCAACAGATCGTTCGGCCTTCGGCGGAATCG 98
||| ||||| |||| |||||||| |||||| ||||||||| |||||| ||||||||||
Sbjct 1 CGGTCCCTTG--CCTTTGGGCAGTT-GGGCCAGCAGATCGTT-GGCCTT-GGCGGAATCG 55
Query 99 GTCATAGGGCATCTCCTGTGT-----------CTTACTGATCGCTCATGCCCAGCAGGCC 147
||||| |||| ||||| | | |||||||||| |||||||||||||||||
Sbjct 56 GTCATGGGGC-TCTCCCTTTTTACGTGCTGGGCTTACTGATCACTCATGCCCAGCAGGCC 114
Query 148 ACGGGCGTATTTGGCCAGGGGGCGGGCGATCAGGTCTTCTGGCTTGTTGTCGTGGAACGT 207
|||||||| | ||||| |||||||| ||||| ||||| |||||||||||||| |||||
Sbjct 115 CCGGGCGTACTGCGCCAGCGGGCGGGCAATCAGATCTTCAGGCTTGTTGTCGTGAAACGT 174
Query 208 CAGTAAACCGCCACGGCTGCGAATACGCACAGTATCAATCAAATAC 253
||||||||||||||| ||||||||||| |||||||||||||||||
Sbjct 175 CAGTAAACCGCCACGACTGCGAATACGTGCAGTATCAATCAAATAC 220
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 746269246422
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |