Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hordeum_20vulgare_20subsp._20vulgare_20[genbank_20GCA_5F000326125.1_ 202012-11-15] 2,077,901 sequences; 1,779,486,241 total letters Query= AAMG01001161.1 Length=375 Score E Sequences producing significant alignments: (Bits) Value seq56851 262 8e-68 >seq56851 Length=216 Score = 262 bits (290), Expect = 8e-68 Identities = 177/197 (90%), Gaps = 1/197 (1%) Strand=Plus/Minus Query 178 GTCATTCGTCTTTGCGGCTGATAACGCGGGTCGCTGGCTTGCAGTTGGTGCAGGCGGGCC 237 |||||||| ||| | |||||||||||||||||| |||||||||||| |||||||||| Sbjct 216 GTCATTCGCCTT-GTGGCTGATAACGCGGGTCGTGCGCTTGCAGTTGGGTCAGGCGGGCC 158 Query 238 AGGGTGTCCTGGCGATAAAAGCGGCTGAGTTGGGCGTACACCTGTGGATAACGATTGACC 297 | || |||||||| ||||||||||||||||||||||||||||||||||||| ||||| Sbjct 157 AAGGGATCCTGGCGGTAAAAGCGGCTGAGTTGGGCGTACACCTGTGGATAACTGTTGACG 98 Query 298 AGTAAATCCGGGGCGCTGAAAAAGTATTCGCTGGTGACGGCAAAGAACTCCGCCGGGTTT 357 ||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||| Sbjct 97 AGTAAATCCGGGGCGCTGAAAAAATATTCGCTGGTGACCGCAAAGAACTCCGCCGGGTTT 38 Query 358 TCGGCGGCGTAGGGGTC 374 || || ||||| ||||| Sbjct 37 TCCGCCGCGTACGGGTC 21 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1074792958624