Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hordeum_20vulgare_20subsp._20vulgare_20[genbank_20GCA_5F000326125.1_
202012-11-15] 2,077,901 sequences; 1,779,486,241 total letters
Query= AAMG01001416.1
Length=341
Score E
Sequences producing significant alignments: (Bits) Value
seq27437 327 2e-87
seq832770 111 3e-22
>seq27437
Length=310
Score = 327 bits (362), Expect = 2e-87
Identities = 219/243 (90%), Gaps = 1/243 (0%)
Strand=Plus/Minus
Query 2 GACTTGAGCTTGCTCGCCACCGGCAACAACACCAGGTTGGCACTGGCCACGCCGTAGATG 61
|||||||||||| ||| |||||||| | | ||||||||||||||||||||||||||||
Sbjct 249 GACTTGAGCTTGGCCGCGACCGGCAAGAGGATCAGGTTGGCACTGGCCACGCCGTAGATG 190
Query 62 GTGGCGACAAACGCCACGGCAATGCCGCTGCCCAGTTGCGAAGGGTCGGCGAGGTTGCCC 121
|| ||||| |||||||||||||||||| | ||||||||||| || |||||||||||||||
Sbjct 189 GTCGCGACGAACGCCACGGCAATGCCGTTACCCAGTTGCGACGGATCGGCGAGGTTGCCC 130
Query 122 ATCACGTGGATCAGGCCCATCACCGCACCGATGATGCCGATGGTCGGCGCGTAGCCGCCC 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 129 ATCACGTGGATCAGGCCCATCACCGCACCGATGATGCCGATGGTCGGCGCGTAGCCGCCC 70
Query 182 ATGCTTTCAAAGACTTTGGCGGCGTTGATATCGCGGCTTTCCTGGGTGGTAGAAATCCAC 241
|||||||| || || ||||| || | ||| |||||| |||||| || ||||||||||||
Sbjct 69 ATGCTTTCGAACACCTTGGCCGCTTCGATGTCGCGGGATTCCTGAGT-GTAGAAATCCAC 11
Query 242 TTC 244
|||
Sbjct 10 TTC 8
>seq832770
Length=234
Score = 111 bits (122), Expect = 3e-22
Identities = 73/81 (90%), Gaps = 0/81 (0%)
Strand=Plus/Plus
Query 261 GCTTCCGGCTCGGCGCCGTCCACCAGCAGTTGCAGGCCTTTGCGCGCGTAGCTGTCGGGC 320
|||||||||||||||||||| |||||||||||||| || ||||||| |||||||| ||
Sbjct 1 GCTTCCGGCTCGGCGCCGTCGACCAGCAGTTGCAGACCCTTGCGCGAATAGCTGTCAGGT 60
Query 321 TCGGCATCGGCCACGCCTTCG 341
||||| |||||||||||||||
Sbjct 61 TCGGCGTCGGCCACGCCTTCG 81
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 968253714912
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |