Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hordeum_20vulgare_20subsp._20vulgare_20[genbank_20GCA_5F000326125.1_ 202012-11-15] 2,077,901 sequences; 1,779,486,241 total letters Query= AAMG01001449.1 Length=395 Score E Sequences producing significant alignments: (Bits) Value seq5001 114 3e-23 >seq5001 Length=289 Score = 114 bits (126), Expect = 3e-23 Identities = 165/232 (71%), Gaps = 3/232 (1%) Strand=Plus/Minus Query 167 ATGGAGTCGTTCGTGGCCATCATGGCGATGGTTGCCGCCTCGGTGATTGAGCCCGGCGTG 226 ||||| ||||||||||| | ||||| |||| || |||||| | || || || ||| | Sbjct 289 ATGGAATCGTTCGTGGCGGTGATGGCACTGGTGGCGGCCTCGATCATCGATCCGGGCATC 230 Query 227 TACTTCGCCATGAACAGCCCGGCTGCCATTGTCGGCACCGACGTGGTCACCGTGGCGC-- 284 |||||||| |||||||||||||| || | ||||| |||||| | | | |||| Sbjct 229 TACTTCGCGATGAACAGCCCGGCGGCGGTGATCGGCGCCGACGCCGCGTCGGCCGCGCAC 170 Query 285 -AAACCGTCAGCAGTTGGGGCTTTGCCATTACGCCTGAGGCGCTGTCGGCCGTTGCCCAC 343 | | | || || |||||||| |||| |||||||| |||| | || ||| Sbjct 169 TACATCACCAACACCTGGGGCTTCACCATCACGCCTGAACAGCTGACCGCGACTGCGGCG 110 Query 344 AATATCGGTGAAACCACCATCCTGGCACGTGCCGGCGGCGCGCCGACTCTGG 395 ||||||||| ||||||||||| ||||| || ||||| || || |||| Sbjct 109 GCCATCGGTGAACCCACCATCCTGCATCGTGCAGGTGGCGCACCAACACTGG 58 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1137463101984