Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hordeum_20vulgare_20subsp._20vulgare_20[genbank_20GCA_5F000326125.1_ 202012-11-15] 2,077,901 sequences; 1,779,486,241 total letters Query= AAMG01001569.1 Length=509 Score E Sequences producing significant alignments: (Bits) Value seq51819 167 7e-39 >seq51819 Length=343 Score = 167 bits (184), Expect = 7e-39 Identities = 165/211 (78%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 212 GGCCTGTATGTGACCGAGGCTTCCATCGGCGCCACCTTCAAGTCTGACGT-CAGTGCCGG 270 ||| |||| |||||||| || |||||||||| |||||| || ||||| ||| | | Sbjct 341 GGCATGTACGTGACCGAAGCCACCATCGGCGCGACCTTCCGCTCCGACGTGCAGAAC-GC 283 Query 271 CACCCGCCGTTACAGTGGCCGCTACGCCGCCTCGCTCAACCAGCGTTTCGGCATGTCGCC 330 || |||||||||||| ||||| |||| || ||||| ||||||| ||||||||| |||| Sbjct 282 CAACCGCCGTTACAGCGGCCGTTACGGTGCGTCGCTGGACCAGCGCTTCGGCATGGCGCC 223 Query 331 CAACCAGGAAACCAACACCAAGCTGGTCAGCGACGTGCTCAGCGATGCCCTGACCCGCCT 390 || ||||| ||||| ||||| ||||||||||| || | || || || ||||| || || Sbjct 222 GAATCAGGAGACCAATACCAAACTGGTCAGCGATGTATTGAGTGACGCACTGACGCGTCT 163 Query 391 GTTCAAGGACCCAAGCATCGGCCAACTGCTC 421 |||||||||||| | | | || || ||||| Sbjct 162 GTTCAAGGACCCGACCGTGGGTCAGGTGCTC 132 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1494682919136