Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hordeum_20vulgare_20subsp._20vulgare_20[genbank_20GCA_5F000326125.1_
202012-11-15] 2,077,901 sequences; 1,779,486,241 total letters
Query= AAMG01001645.1
Length=355
Score E
Sequences producing significant alignments: (Bits) Value
seq838377 260 3e-67
seq827880 138 2e-30
>seq838377
Length=231
Score = 260 bits (288), Expect = 3e-67
Identities = 192/224 (86%), Gaps = 0/224 (0%)
Strand=Plus/Minus
Query 102 TTGTTCGGCCTGGCGGACACACCGCGCATTGCCGGCGGGCGCCAGGTGGTCAAGTTGCAC 161
||||| || ||||| || || || || ||||||||||| || || ||||||||| ||||
Sbjct 230 TTGTTTGGTCTGGCCGATACGCCACGGATTGCCGGCGGCCGGCAAGTGGTCAAGCTGCAT 171
Query 162 CTGCTGTCCCCGTCGCGCAGGCCGGTGCAGGTGACCCAGGATCTGGCGAACTTCTGGCGC 221
||||| || || |||| ||||||||||||| || ||||||||||| ||||||||||||
Sbjct 170 CTGCTCTCGCCAGCGCGGCGGCCGGTGCAGGTCACGCAGGATCTGGCCAACTTCTGGCGC 111
Query 222 AGTACCTACGCCGAGGTGAAGAAGGATCTGAAGGGGCGGTATCCGAAGCATTATTGGCCG 281
|||||||| ||||||||||||||||||||||||||||| || || |||||||| ||||||
Sbjct 110 AGTACCTATGCCGAGGTGAAGAAGGATCTGAAGGGGCGCTACCCCAAGCATTACTGGCCG 51
Query 282 GATGATCCGTTGGTGGCCGAAGCGACGGCGCGGATCAAACCCCG 325
||||||||| ||||||| ||||| ||||||||| ||||||||
Sbjct 50 GATGATCCGCTGGTGGCTGAAGCCACGGCGCGGGCGAAACCCCG 7
>seq827880
Length=308
Score = 138 bits (152), Expect = 2e-30
Identities = 162/219 (74%), Gaps = 0/219 (0%)
Strand=Plus/Plus
Query 81 CTGGCGGTGCGCCTGCAGGAATTGTTCGGCCTGGCGGACACACCGCGCATTGCCGGCGGG 140
||||||||| ||||||||| ||||||||||||| ||||| |||||||| |||| ||
Sbjct 4 CTGGCGGTGAAGCTGCAGGAACTGTTCGGCCTGGCCGACACGCCGCGCATCGCCGATGGC 63
Query 141 CGCCAGGTGGTCAAGTTGCACCTGCTGTCCCCGTCGCGCAGGCCGGTGCAGGTGACCCAG 200
||| | | | | |||||||||| ||||| || | ||| ||||||| ||||||
Sbjct 64 CGCGTGCCGCTGACCCTGCACCTGCTCTCCCCCGGTGGCCGCCCGCTGCAGGTCACCCAG 123
Query 201 GATCTGGCGAACTTCTGGCGCAGTACCTACGCCGAGGTGAAGAAGGATCTGAAGGGGCGG 260
|| ||| ||||||||| | |||||||| || ||||| ||||| ||||||| ||
Sbjct 124 GACCTGCGCAACTTCTGGGAAAACACCTACGCGGAAGTGAAAAAGGAAATGAAGGGCCGC 183
Query 261 TATCCGAAGCATTATTGGCCGGATGATCCGTTGGTGGCC 299
|| || ||| ||||||||||| |||| | ||||
Sbjct 184 TACCCACGCCATCCGTGGCCGGATGACCCGTGGACGGCC 222
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1012122815264
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |