Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hordeum_20vulgare_20subsp._20vulgare_20[genbank_20GCA_5F000326125.1_
202012-11-15] 2,077,901 sequences; 1,779,486,241 total letters
Query= AAMG01001690.1
Length=455
Score E
Sequences producing significant alignments: (Bits) Value
seq838333 232 2e-58
seq2072387 149 2e-33
>seq838333
Length=232
Score = 232 bits (256), Expect = 2e-58
Identities = 131/133 (98%), Gaps = 0/133 (0%)
Strand=Plus/Minus
Query 1 CGATCAGGAACACTTCACGGGCACCGGCGCCAAGGGCCGATTCACGGATGGCACGACGCT 60
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 135 CGATCAGGAACACTTCGCGGGCACCGGCGCCAAGGGCCGATTCACGGATGGCACGACGCT 76
Query 61 CCACCTGGGTGGACTTGCACGGAACGCAGATCAGCACACGAGGGCTGGGCTGCAGGAAAC 120
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 75 CCACCTGGGTGGACTTGCACGGGACGCAGATCAGCACACGAGGGCTGGGCTGCAGGAAAC 16
Query 121 TGTTTTCGTGAAC 133
|||||||||||||
Sbjct 15 TGTTTTCGTGAAC 3
>seq2072387
Length=264
Score = 149 bits (164), Expect = 2e-33
Identities = 87/90 (97%), Gaps = 0/90 (0%)
Strand=Plus/Plus
Query 366 CCCAGGTCAATGGAAAGATCGCTGGAAAACATGCCACGCAGTTTCTTGAACATGGGGAAA 425
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 1 CCCAGGTCAATGGAAAGATCGCTGGAAAACATGCCACGCAGTTTCTTGAACATGGGAAAG 60
Query 426 GGACCCTAAGCAACGCGTGGGTAAAAAAGT 455
|||||||| |||||||||||||||||||||
Sbjct 61 GGACCCTAGGCAACGCGTGGGTAAAAAAGT 90
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1325473532064
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |