Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hordeum_20vulgare_20subsp._20vulgare_20[genbank_20GCA_5F000326125.1_
202012-11-15] 2,077,901 sequences; 1,779,486,241 total letters
Query= AAMG01001851.1
Length=140
Score E
Sequences producing significant alignments: (Bits) Value
seq94791 87.8 1e-15
seq843204 71.6 1e-10
>seq94791
Length=2561
Score = 87.8 bits (96), Expect = 1e-15
Identities = 90/118 (76%), Gaps = 0/118 (0%)
Strand=Plus/Minus
Query 1 TACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCATAGCCACCGGATCACTATGACCTG 60
|| |||||||||||||||||| |||||||||| || || |||||||||| | ||
Sbjct 741 TAACTTTTATCCGTTGAGCGACGGCCCTTCCACTCGGCACCGTCGGATCACTAAGGCCGA 682
Query 61 CTTTCGCATCTGCTCTAGTTGTTGCTCTCGCAATCAAGCACACTTTTGCCATTGCACT 118
|||||| ||||||| | || ||| ||| |||||| | ||| |||| |||||||
Sbjct 681 CTTTCGTCTCTGCTCGACGGGTGAGTCTTGCAGTCAAGCTCCCTTCTGCCTTTGCACT 624
>seq843204
Length=2306
Score = 71.6 bits (78), Expect = 1e-10
Identities = 80/103 (78%), Gaps = 3/103 (3%)
Strand=Plus/Minus
Query 4 CTTTTATCCGTTGAGCGATGGCCCTTCCATTCATAGCCACCGGATCACTATGACCTGCTT 63
||||||||||||||||||||||||||||| || | || ||| |||||| |||| |||
Sbjct 103 CTTTTATCCGTTGAGCGATGGCCCTTCCACTCGTCCCCGTCGG-TCACTAAGACCGACTT 45
Query 64 TCGCATCTGCTCTAGTTGTTG-CTCTCGCAATCAAGCACACTT 105
| | ||||||| | |||| ||| ||| |||||| | |||
Sbjct 44 TAGTCTCTGCTCGA-CGGTTGAATCTTGCAGTCAAGCTCCCTT 3
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 345142926700
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |