Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hordeum_20vulgare_20subsp._20vulgare_20[genbank_20GCA_5F000326125.1_ 202012-11-15] 2,077,901 sequences; 1,779,486,241 total letters Query= AAMG01001997.1 Length=304 Score E Sequences producing significant alignments: (Bits) Value seq51794 257 3e-66 >seq51794 Length=206 Score = 257 bits (284), Expect = 3e-66 Identities = 178/202 (88%), Gaps = 0/202 (0%) Strand=Plus/Plus Query 103 CAAGCAGTTGAAATTAGAAAATGCGCTCTAAACAGCAAGACCGTTGAGCTAGAGCATCAG 162 ||||||| |||||||||||||||| ||||||| ||||| | || |||||||||||| Sbjct 1 CAAGCAGATGAAATTAGAAAATGCTCTCTAAAGAGCAAAAGGCCTGGACTAGAGCATCAG 60 Query 163 CCGCACGACCGACTCACTCGGATCGCGGGTTTTACCAGCGGCTTTGAGCTCGGCCAGGTA 222 |||||||||||| || ||||||||||||||||| || || || ||||||||||| || || Sbjct 61 CCGCACGACCGATTCGCTCGGATCGCGGGTTTTGCCGGCCGCCTTGAGCTCGGCAAGATA 120 Query 223 GTCGGCCCACAAAGCGTCCTGACGTACGGCCAACTGATAGAGGTAGTCCCAGGTGAACAG 282 ||||||||||| ||||||||||| |||||||| || ||||||||||||||||||||||| Sbjct 121 ATCGGCCCACAACGCGTCCTGACGCACGGCCAATTGGTAGAGGTAGTCCCAGGTGAACAG 180 Query 283 TCCGCTGTCATGACCGTCGTCG 304 |||||||||||| ||||||||| Sbjct 181 TCCGCTGTCATGCCCGTCGTCG 202 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 852313949696