Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hordeum_20vulgare_20subsp._20vulgare_20[genbank_20GCA_5F000326125.1_
202012-11-15] 2,077,901 sequences; 1,779,486,241 total letters
Query= AAMG01001997.1
Length=304
Score E
Sequences producing significant alignments: (Bits) Value
seq51794 257 3e-66
>seq51794
Length=206
Score = 257 bits (284), Expect = 3e-66
Identities = 178/202 (88%), Gaps = 0/202 (0%)
Strand=Plus/Plus
Query 103 CAAGCAGTTGAAATTAGAAAATGCGCTCTAAACAGCAAGACCGTTGAGCTAGAGCATCAG 162
||||||| |||||||||||||||| ||||||| ||||| | || ||||||||||||
Sbjct 1 CAAGCAGATGAAATTAGAAAATGCTCTCTAAAGAGCAAAAGGCCTGGACTAGAGCATCAG 60
Query 163 CCGCACGACCGACTCACTCGGATCGCGGGTTTTACCAGCGGCTTTGAGCTCGGCCAGGTA 222
|||||||||||| || ||||||||||||||||| || || || ||||||||||| || ||
Sbjct 61 CCGCACGACCGATTCGCTCGGATCGCGGGTTTTGCCGGCCGCCTTGAGCTCGGCAAGATA 120
Query 223 GTCGGCCCACAAAGCGTCCTGACGTACGGCCAACTGATAGAGGTAGTCCCAGGTGAACAG 282
||||||||||| ||||||||||| |||||||| || |||||||||||||||||||||||
Sbjct 121 ATCGGCCCACAACGCGTCCTGACGCACGGCCAATTGGTAGAGGTAGTCCCAGGTGAACAG 180
Query 283 TCCGCTGTCATGACCGTCGTCG 304
|||||||||||| |||||||||
Sbjct 181 TCCGCTGTCATGCCCGTCGTCG 202
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 852313949696
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |