Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hordeum_20vulgare_20subsp._20vulgare_20[genbank_20GCA_5F000326125.1_ 202012-11-15] 2,077,901 sequences; 1,779,486,241 total letters Query= AAMG01001999.1 Length=541 Score E Sequences producing significant alignments: (Bits) Value seq1870575 264 4e-68 >seq1870575 Length=231 Score = 264 bits (292), Expect = 4e-68 Identities = 179/201 (89%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 339 CTTGAGCTGGATGTACAGGAAACCTCGCTCCCCAGCCTTGTTCAGCAAGCCATGGCCCTT 398 ||||||||| | | |||| |||| || || || ||||||||||||| |||||||||||| Sbjct 1 CTTGAGCTGCACGAACAGATAACCGCGTTCGCCGGCCTTGTTCAGCAGGCCATGGCCCTT 60 Query 399 GGCGCGCATGCGCTGGCCGTTCTGGCTGCCGGCCGGCACCTTGAGGTTGATCTTGCCGGT 458 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 61 GGCGCGCATGCGCTGGCCGTTCTGGCTGCCGGCCGGGACCTTGAGGTTGATCTTGCCGGT 120 Query 459 CAGGGTCGGCACGGCCACTTCGGCGCCCAGCGCCAGTTCCCACGGTGCCAGTGGCAAGGT 518 |||||||||||| |||||||| ||||||||||||| ||||||||| ||||| |||| | | Sbjct 121 CAGGGTCGGCACCGCCACTTCCGCGCCCAGCGCCAATTCCCACGGCGCCAGCGGCAGGTT 180 Query 519 GATCACCAGGTTGTCGCCTTC 539 ||| | |||||| ||||| || Sbjct 181 GATGATCAGGTTTTCGCCATC 201 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1594955148512