Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hordeum_20vulgare_20subsp._20vulgare_20[genbank_20GCA_5F000326125.1_
202012-11-15] 2,077,901 sequences; 1,779,486,241 total letters
Query= AAMG01001999.1
Length=541
Score E
Sequences producing significant alignments: (Bits) Value
seq1870575 264 4e-68
>seq1870575
Length=231
Score = 264 bits (292), Expect = 4e-68
Identities = 179/201 (89%), Gaps = 0/201 (0%)
Strand=Plus/Plus
Query 339 CTTGAGCTGGATGTACAGGAAACCTCGCTCCCCAGCCTTGTTCAGCAAGCCATGGCCCTT 398
||||||||| | | |||| |||| || || || ||||||||||||| ||||||||||||
Sbjct 1 CTTGAGCTGCACGAACAGATAACCGCGTTCGCCGGCCTTGTTCAGCAGGCCATGGCCCTT 60
Query 399 GGCGCGCATGCGCTGGCCGTTCTGGCTGCCGGCCGGCACCTTGAGGTTGATCTTGCCGGT 458
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 61 GGCGCGCATGCGCTGGCCGTTCTGGCTGCCGGCCGGGACCTTGAGGTTGATCTTGCCGGT 120
Query 459 CAGGGTCGGCACGGCCACTTCGGCGCCCAGCGCCAGTTCCCACGGTGCCAGTGGCAAGGT 518
|||||||||||| |||||||| ||||||||||||| ||||||||| ||||| |||| | |
Sbjct 121 CAGGGTCGGCACCGCCACTTCCGCGCCCAGCGCCAATTCCCACGGCGCCAGCGGCAGGTT 180
Query 519 GATCACCAGGTTGTCGCCTTC 539
||| | |||||| ||||| ||
Sbjct 181 GATGATCAGGTTTTCGCCATC 201
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1594955148512
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |