Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hordeum_20vulgare_20subsp._20vulgare_20[genbank_20GCA_5F000326125.1_
202012-11-15] 2,077,901 sequences; 1,779,486,241 total letters
Query= AAMG01002002.1
Length=198
Score E
Sequences producing significant alignments: (Bits) Value
seq8115 147 2e-33
seq6935 145 8e-33
>seq8115
Length=210
Score = 147 bits (162), Expect = 2e-33
Identities = 95/103 (92%), Gaps = 1/103 (1%)
Strand=Plus/Plus
Query 1 TGCTGACCAACATCGCCCGCCTGATGGACAAGGAAGGCAAGGTGTTGACCGGCTTCGACC 60
|||| |||||||||||| |||||||||||||||||||||||||| |||||||||| ||||
Sbjct 109 TGCTCACCAACATCGCCGGCCTGATGGACAAGGAAGGCAAGGTGCTGACCGGCTT-GACC 167
Query 61 ACGCAACAAGTGGACGACCTGATCGCCGACGGCACCATCTACG 103
|| |||||||||||||| ||||| ||||| |||||||||||||
Sbjct 168 ACTCAACAAGTGGACGAGCTGATTGCCGATGGCACCATCTACG 210
>seq6935
Length=253
Score = 145 bits (160), Expect = 8e-33
Identities = 89/95 (94%), Gaps = 0/95 (0%)
Strand=Plus/Plus
Query 79 CTGATCGCCGACGGCACCATCTACGGCGGCATGCTGCCGAAGATCCGTTGCGCACTGGAA 138
||||| ||||| ||||||||||||||||||||| ||||||| ||||||||||| ||||||
Sbjct 3 CTGATTGCCGATGGCACCATCTACGGCGGCATGTTGCCGAAAATCCGTTGCGCGCTGGAA 62
Query 139 GCAGTGCAAGGCGGCGTGGGCAGCTCGCTGATCCT 173
||||||||||||||||| |||||||||||||||||
Sbjct 63 GCAGTGCAAGGCGGCGTCGGCAGCTCGCTGATCCT 97
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 523642706523
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |