Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hordeum_20vulgare_20subsp._20vulgare_20[genbank_20GCA_5F000326125.1_ 202012-11-15] 2,077,901 sequences; 1,779,486,241 total letters Query= AAMG01002002.1 Length=198 Score E Sequences producing significant alignments: (Bits) Value seq8115 147 2e-33 seq6935 145 8e-33 >seq8115 Length=210 Score = 147 bits (162), Expect = 2e-33 Identities = 95/103 (92%), Gaps = 1/103 (1%) Strand=Plus/Plus Query 1 TGCTGACCAACATCGCCCGCCTGATGGACAAGGAAGGCAAGGTGTTGACCGGCTTCGACC 60 |||| |||||||||||| |||||||||||||||||||||||||| |||||||||| |||| Sbjct 109 TGCTCACCAACATCGCCGGCCTGATGGACAAGGAAGGCAAGGTGCTGACCGGCTT-GACC 167 Query 61 ACGCAACAAGTGGACGACCTGATCGCCGACGGCACCATCTACG 103 || |||||||||||||| ||||| ||||| ||||||||||||| Sbjct 168 ACTCAACAAGTGGACGAGCTGATTGCCGATGGCACCATCTACG 210 >seq6935 Length=253 Score = 145 bits (160), Expect = 8e-33 Identities = 89/95 (94%), Gaps = 0/95 (0%) Strand=Plus/Plus Query 79 CTGATCGCCGACGGCACCATCTACGGCGGCATGCTGCCGAAGATCCGTTGCGCACTGGAA 138 ||||| ||||| ||||||||||||||||||||| ||||||| ||||||||||| |||||| Sbjct 3 CTGATTGCCGATGGCACCATCTACGGCGGCATGTTGCCGAAAATCCGTTGCGCGCTGGAA 62 Query 139 GCAGTGCAAGGCGGCGTGGGCAGCTCGCTGATCCT 173 ||||||||||||||||| ||||||||||||||||| Sbjct 63 GCAGTGCAAGGCGGCGTCGGCAGCTCGCTGATCCT 97 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 523642706523