Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hordeum_20vulgare_20subsp._20vulgare_20[genbank_20GCA_5F000326125.1_
202012-11-15] 2,077,901 sequences; 1,779,486,241 total letters
Query= AAMG01002011.1
Length=284
Score E
Sequences producing significant alignments: (Bits) Value
seq832389 378 1e-102
>seq832389
Length=271
Score = 378 bits (418), Expect = 1e-102
Identities = 246/269 (91%), Gaps = 1/269 (0%)
Strand=Plus/Minus
Query 16 CTGGATTTCGCGGTGTTCCCGACGTATTCTGCAGGTGGCGACCCTGCTACGTCTGGCATT 75
|||||||||||||| ||||||||| ||||||| ||||||||||||||| || ||||| |
Sbjct 271 CTGGATTTCGCGGTATTCCCGACG-ATTCTGCTGGTGGCGACCCTGCTGCGGCTGGCGCT 213
Query 76 GAACGTCGCCTCCACGCGGGTGGTGATGCTCCACGGCCAGGACGGCCATGCCGCTGCCGG 135
|||||| || ||||| || ||||| ||||||||||| || || ||||| || ||||||||
Sbjct 212 GAACGTGGCGTCCACCCGAGTGGTAATGCTCCACGGTCAAGATGGCCACGCGGCTGCCGG 153
Query 136 TAAGGTGATCCAGGCCTTCGGTGAGGTGGTGATCGGCGGTAACTACGTGGTCGGTATCGT 195
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 152 TAAGGTGATCCAGGCCTTCGGTGAGGTGGTGATCGGCGGTAACTACGTGGTCGGTATCGT 93
Query 196 GGTGTTCGCGATCCTGATGATCATCAACTTTGTGGTGGTGACCAAGGGCGCCGGGCGGAT 255
||||||||| |||||||||||||||||||| || ||||| ||||||||||||||||||||
Sbjct 92 GGTGTTCGCCATCCTGATGATCATCAACTTCGTCGTGGTAACCAAGGGCGCCGGGCGGAT 33
Query 256 TTCCGAGGTGAGCGCGCGGTTTACCCTCG 284
||||||||||||||| || ||||||||||
Sbjct 32 TTCCGAGGTGAGCGCACGTTTTACCCTCG 4
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 793303022457
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |