Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hordeum_20vulgare_20subsp._20vulgare_20[genbank_20GCA_5F000326125.1_ 202012-11-15] 2,077,901 sequences; 1,779,486,241 total letters Query= AAMG01002011.1 Length=284 Score E Sequences producing significant alignments: (Bits) Value seq832389 378 1e-102 >seq832389 Length=271 Score = 378 bits (418), Expect = 1e-102 Identities = 246/269 (91%), Gaps = 1/269 (0%) Strand=Plus/Minus Query 16 CTGGATTTCGCGGTGTTCCCGACGTATTCTGCAGGTGGCGACCCTGCTACGTCTGGCATT 75 |||||||||||||| ||||||||| ||||||| ||||||||||||||| || ||||| | Sbjct 271 CTGGATTTCGCGGTATTCCCGACG-ATTCTGCTGGTGGCGACCCTGCTGCGGCTGGCGCT 213 Query 76 GAACGTCGCCTCCACGCGGGTGGTGATGCTCCACGGCCAGGACGGCCATGCCGCTGCCGG 135 |||||| || ||||| || ||||| ||||||||||| || || ||||| || |||||||| Sbjct 212 GAACGTGGCGTCCACCCGAGTGGTAATGCTCCACGGTCAAGATGGCCACGCGGCTGCCGG 153 Query 136 TAAGGTGATCCAGGCCTTCGGTGAGGTGGTGATCGGCGGTAACTACGTGGTCGGTATCGT 195 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 152 TAAGGTGATCCAGGCCTTCGGTGAGGTGGTGATCGGCGGTAACTACGTGGTCGGTATCGT 93 Query 196 GGTGTTCGCGATCCTGATGATCATCAACTTTGTGGTGGTGACCAAGGGCGCCGGGCGGAT 255 ||||||||| |||||||||||||||||||| || ||||| |||||||||||||||||||| Sbjct 92 GGTGTTCGCCATCCTGATGATCATCAACTTCGTCGTGGTAACCAAGGGCGCCGGGCGGAT 33 Query 256 TTCCGAGGTGAGCGCGCGGTTTACCCTCG 284 ||||||||||||||| || |||||||||| Sbjct 32 TTCCGAGGTGAGCGCACGTTTTACCCTCG 4 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 793303022457