Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leersia_20perrieri_20[genbank_20GCA_5F000325765.3_202014-02-21] 12 sequences; 266,687,832 total letters Query= AAMG01000753.1 Length=364 Score E Sequences producing significant alignments: (Bits) Value seq6 145 2e-32 seq8 138 2e-30 seq9 96.9 7e-18 >seq6 Length=21016138 Score = 145 bits (160), Expect = 2e-32 Identities = 85/88 (97%), Gaps = 0/88 (0%) Strand=Plus/Plus Query 67 ACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 126 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 10299787 ACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 10299846 Query 127 TAGTTACGGCCGCCGTTTACTGGGGCTT 154 ||||||| ||||||||| || ||||||| Sbjct 10299847 TAGTTACAGCCGCCGTTCACCGGGGCTT 10299874 Score = 86.0 bits (94), Expect = 1e-14 Identities = 55/60 (92%), Gaps = 0/60 (0%) Strand=Plus/Minus Query 69 GCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATA 128 |||||||||||||||| |||||||||||| |||||||||||||||||||||| | || || Sbjct 19868598 GCCTTTCGTGCGGGTCAGAACTTACCCGATAAGGAATTTCGCTACCTTAGGATCATTTTA 19868539 >seq8 Length=20165712 Score = 138 bits (152), Expect = 2e-30 Identities = 123/154 (80%), Gaps = 0/154 (0%) Strand=Plus/Plus Query 1 TACCCGGCATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAA 60 ||| | |||||||||| | || | ||||||||||| ||| || ||||||| | | Sbjct 7468760 TACTCCGCATCTTCACGGAGAATTCAATTTCACCGGGTCCATGTCGGAGACAGCGGGGCA 7468819 Query 61 ATCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGA 120 ||||||| || ||||||| ||||| ||||| |||||||||||||||||||||||||| Sbjct 7468820 GTCGTTACACCATTCGTGCAGGTCGCTACTTATGCGACAAGGAATTTCGCTACCTTAGGA 7468879 Query 121 CCGTTATAGTTACGGCCGCCGTTTACTGGGGCTT 154 | |||| |||||| ||||| ||||| ||||||| Sbjct 7468880 CAGTTAGAGTTACTGCCGCTATTTACCGGGGCTT 7468913 >seq9 Length=15534364 Score = 96.9 bits (106), Expect = 7e-18 Identities = 109/146 (75%), Gaps = 10/146 (7%) Strand=Plus/Minus Query 229 CGTCTTGCGACTTAGCAGAAACCTGTGTTTTTGGTAAACAGTCGCTTGGGCCTATTCTCT 288 ||| || | |||||||||| ||||||||||| |||||||||||| ||| | | | Sbjct 3261924 CGTGTTACCACTTAGCAGAGTCCTGTGTTTTTAATAAACAGTCGCTACCCCCTGGTATGT 3261865 Query 289 GCGGCCTGTC------ATAGACAGG----CACCCCTTCTCCCTAAGTTACGGGGTCATTT 338 || || | | | ||| ||| ||||||||||||| ||||||||||||||||| Sbjct 3261864 GCCGCTTTCCTAATCAAAAGATAGGAGAGCACCCCTTCTCCCGAAGTTACGGGGTCATTT 3261805 Query 339 TGCCGAGTTCCTTAACAATAGTTCTC 364 ||||||||||||| || |||||| Sbjct 3261804 TGCCGAGTTCCTTCGACATGGTTCTC 3261779 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1062399872512