Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leersia_20perrieri_20[genbank_20GCA_5F000325765.3_202014-02-21] 12 sequences; 266,687,832 total letters Query= AAMG01001083.1 Length=339 Score E Sequences producing significant alignments: (Bits) Value seq9 89.7 1e-15 >seq9 Length=15534364 Score = 89.7 bits (98), Expect = 1e-15 Identities = 122/169 (72%), Gaps = 6/169 (4%) Strand=Plus/Plus Query 130 AGTTTGACTGGGGCGGTCGCCTCCCAAAGAGTAACGGAGGCGCCCAAAGATACCCTCAGC 189 ||||| ||||||| |||||||||| |||||||||||| ||||| | |||| | Sbjct 9692092 AGTTTCTATGGGGCGTAGGCCTCCCAAAAGGTAACGGAGGCGTGCAAAGGTTTCCTCGGG 9692151 Query 190 TTGGATGGAAACCATGCGCAC---AGTGCAAAGGCAAAAGGGTGTTTGACTGCGACACCC 246 || ||| ||| | | |||||||||||| ||||| | ||||||| | || | Sbjct 9692152 CCAGACGGA---CATTGGTCCTCGAGTGCAAAGGCAGAAGGGAGCTTGACTGTAAGACTC 9692208 Query 247 TCAAGTCTAGCAGGGACGAAAGTCGGGCTTAATGATCCGGCGGTGCTGA 295 | ||| || || |||||||||||| |||| ||||| | |||||| || Sbjct 9692209 ACCCGTCGAGTAGAGACGAAAGTCGGCCTTAGTGATCTGACGGTGCCGA 9692257 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 982399882112