Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Leersia_20perrieri_20[genbank_20GCA_5F000325765.3_202014-02-21]
12 sequences; 266,687,832 total letters
Query= AAMG01001844.1
Length=290
Score E
Sequences producing significant alignments: (Bits) Value
seq9 105 1e-20
seq4 89.7 9e-16
>seq9
Length=15534364
Score = 105 bits (116), Expect = 1e-20
Identities = 82/98 (84%), Gaps = 0/98 (0%)
Strand=Plus/Plus
Query 188 CCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACGTATTACC 247
|||||||| ||||||||| |||| | | |||| | ||| |||||| || ||| |||||
Sbjct 3281781 CCGCCTACGTGCCCTTTACGCCCAGTCATTCCGAAGAACACTTGCCCCCCCCGTCTTACC 3281840
Query 248 GCGGCTGCTGGCACGTAGTTAGCCGTGGCTTATTCCTC 285
||||||||||||||| ||||||||| ||||| ||||||
Sbjct 3281841 GCGGCTGCTGGCACGGAGTTAGCCGGGGCTTCTTCCTC 3281878
Score = 91.5 bits (100), Expect = 2e-16
Identities = 104/140 (74%), Gaps = 0/140 (0%)
Strand=Plus/Plus
Query 151 GGGTTGAGCCCATAGTTTTCACATCTGACTTGCCTTCCCGCCTACACGCCCTTTACACCC 210
||||||||||| | ||| || | |||||| || |||||| | ||||| |||
Sbjct 4218808 GGGTTGAGCCCTGGGATTTGACGGCGGACTTGAAAAGCCACCTACAGACGCTTTATGCCC 4218867
Query 211 AATAAATCCGGATAACGCTTGCCACCTACGTATTACCGCGGCTGCTGGCACGTAGTTAGC 270
||| | |||||||||||||||| ||| || ||||| |||||||| |||| ||| |||
Sbjct 4218868 AATCATTCCGGATAACGCTTGCATCCTCTGTCTTACCACGGCTGCTAGCACAGAGTCAGC 4218927
Query 271 CGTGGCTTATTCCTCAGGTA 290
| | ||||||||||| ||
Sbjct 4218928 TGATGTTTATTCCTCAGATA 4218947
>seq4
Length=23326293
Score = 89.7 bits (98), Expect = 9e-16
Identities = 64/74 (86%), Gaps = 0/74 (0%)
Strand=Plus/Plus
Query 217 TCCGGATAACGCTTGCCACCTACGTATTACCGCGGCTGCTGGCACGTAGTTAGCCGTGGC 276
|||||||||||||||| ||| || ||||||||||||||||||| ||||||||| ||
Sbjct 11389153 TCCGGATAACGCTTGCATCCTCTGTCTTACCGCGGCTGCTGGCACAGAGTTAGCCGATGC 11389212
Query 277 TTATTCCTCAGGTA 290
||||||||||| ||
Sbjct 11389213 TTATTCCTCAGATA 11389226
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 828799903652
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |