Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lolium_20perenne_20[genbank_20GCA_5F001735685.1_202016-09-20] 666,180 sequences; 481,479,386 total letters Query= AAMG01000026.1 Length=199 Score E Sequences producing significant alignments: (Bits) Value seq582522 127 2e-27 >seq582522 Length=252 Score = 127 bits (140), Expect = 2e-27 Identities = 121/155 (78%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 1 GCAGTCTTTAGATGAATGGCTGCTTCCAGGCCAACATCCTAACTGTCTTATCAATCAGAC 60 ||| |||||| ||||||||||||||||| |||||||||||| |||||| ||||| ||| Sbjct 163 GCACTCTTTAAATGAATGGCTGCTTCCAAGCCAACATCCTAGCTGTCTGTGCAATCGGAC 104 Query 61 TTCGTTAGATTGACTTATCTGACATTTCTGGGGCATATCTGAGAGTCCGGATTCTTCTCC 120 ||||||| | ||||| | |||| || | || |||| ||| || ||||| || Sbjct 103 CTCGTTAGTTCAACTTAGCGTTAATTTGGGGACCTTAGCTGATGGTCTGGGTTCTTTCCC 44 Query 121 TCTCGGGCACGGACCTTACCACCCATGCCCTCACT 155 |||||| || |||||||| ||||||| ||||||| Sbjct 43 TCTCGGCCATGGACCTTAGCACCCATAGCCTCACT 9 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 534130534560