Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lolium_20perenne_20[genbank_20GCA_5F001735685.1_202016-09-20] 666,180 sequences; 481,479,386 total letters Query= AAMG01000370.1 Length=180 Score E Sequences producing significant alignments: (Bits) Value seq179349 98.7 9e-19 seq295735 86.0 6e-15 >seq179349 Length=757 Score = 98.7 bits (108), Expect = 9e-19 Identities = 86/107 (80%), Gaps = 0/107 (0%) Strand=Plus/Plus Query 8 GGTGGATGCCTAGGCTCTCGGAGGCGAAGAAGGACGTGATAAGCTGCGAAAAGCTACGGG 67 ||||||||||| ||| | |||||||||||||||||||| |||||||||||| ||| Sbjct 227 GGTGGATGCCTTGGCATGCACAGGCGAAGAAGGACGTGATACGCTGCGAAAAGCCGTGGG 286 Query 68 GATTGGCACATACGAATTGATCCGTAGATATCCGAATGGGGCAACCC 114 || || ||| | ||||||| | ||| ||||||||||||||||| Sbjct 287 GAGCTGCGAATAAGCTTTGATCCATGGATCTCCGAATGGGGCAACCC 333 >seq295735 Length=520 Score = 86.0 bits (94), Expect = 6e-15 Identities = 89/114 (78%), Gaps = 2/114 (2%) Strand=Plus/Minus Query 2 GCAGACGGTGGATGCCTAGGCTCTCGGAGGCGAAGAAGGACGTGATAAGCTGCGAAAAGC 61 ||| ||||||||||||| ||| || ||||||| |||||||||| | |||||||||| Sbjct 238 GCACACGGTGGATGCCTTGGCGGTCAGAGGCGATGAAGGACGTGGCAGCCTGCGAAAAGT 179 Query 62 TACGGGGAT-TGGCACATACGAATTGATCCGTAGATATCCGAATGGGGCAACCC 114 |||||| ||||| | | | |||||||| || ||||||||||| ||||| Sbjct 178 ATCGGGGAGCTGGCA-ACAAGCTTTGATCCGGTAATGTCCGAATGGGGAAACCC 126 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 473722914580