Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lolium_20perenne_20[genbank_20GCA_5F001735685.1_202016-09-20] 666,180 sequences; 481,479,386 total letters Query= AAMG01002055.1 Length=294 Score E Sequences producing significant alignments: (Bits) Value seq188689 95.1 2e-17 >seq188689 Length=729 Score = 95.1 bits (104), Expect = 2e-17 Identities = 102/134 (76%), Gaps = 1/134 (1%) Strand=Plus/Minus Query 97 CAAGGAAGGCTTCTTAGTGGAATTTCCACGTTGCCCACTCGCTTCATGCGTTTTTTACCG 156 || |||| ||||||| | ||||| || ||| || || || |||||||| || || || Sbjct 227 CATGGAATGCTTCTT-GAGGAATATCGACGGATCCTACACGTTTCATGCGCTTCTTCCCT 169 Query 157 GCCTTTTGCTTCTCAAGCAGCTTGCGCTTACGGCTTACGTCACCGCCGTAGCATTTGGCC 216 ||||||||||||| |||| ||| ||| || | | |||||| || ||||| |||||| Sbjct 168 TCCTTTTGCTTCTCTAGCAACTTCTTCTTGCGAGTAATGTCACCACCATAGCACTTGGCC 109 Query 217 AGTACGTTCTTTCT 230 || || |||||||| Sbjct 108 AGAACATTCTTTCT 95 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 836168634460