Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lolium_20perenne_20[genbank_20GCA_5F001735685.1_202016-09-20] 666,180 sequences; 481,479,386 total letters Query= NC_031264.1 Length=46877 Score E Sequences producing significant alignments: (Bits) Value seq250615 87.8 5e-13 >seq250615 Length=590 Score = 87.8 bits (96), Expect = 5e-13 Identities = 101/136 (74%), Gaps = 0/136 (0%) Strand=Plus/Plus Query 3715 ATCAACTCTCCGGGCGGGGACTTCTTTGAAGGTGTGGCGATCTACAATCTGCTGCGCGCG 3774 |||||||| |||||||||||| | || || || | |||||| || ||||||||| Sbjct 404 ATCAACTCCCCGGGCGGGGACGTTTTCGACGGCATCGCGATCCTGAACGCCCTGCGCGCG 463 Query 3775 CACCCGGCGAAAGTCACAGTGCGCATTCTCGGCATGGCCGCTTCTGCCGCATCTGTTATC 3834 |||||||| || || ||| | | |||| | ||||| || |||||||| | ||| Sbjct 464 CACCCGGCCAACAAGACGGTGACCGTGGACGGCCTCGCCGCGTCGGCCGCATCCTTCATC 523 Query 3835 GCTATGGCCGGTGATG 3850 || ||||||||||||| Sbjct 524 GCCATGGCCGGTGATG 539 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 148699078209240