Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Musa_20acuminata_20subsp._20malaccensis_20[refseq_20GCF_5F000313855.
2_202012-11-14] 7,259 sequences; 472,231,289 total letters
Query= AAMG01000185.1
Length=266
Score E
Sequences producing significant alignments: (Bits) Value
seq3867 405 8e-111
seq3082 405 8e-111
seq4678 390 2e-106
seq2905 381 9e-104
seq1293 369 6e-100
seq4275 367 2e-99
seq1289 361 8e-98
seq2298 360 3e-97
seq1224 345 6e-93
seq3850 318 9e-85
seq4666 307 2e-81
seq600 295 1e-77
seq6 197 2e-48
seq8 161 1e-37
seq2 116 6e-24
seq3 100 4e-19
seq5081 86.0 9e-15
seq7 75.2 2e-11
seq10 73.4 6e-11
>seq3867
Length=26241
Score = 405 bits (448), Expect = 8e-111
Identities = 247/257 (96%), Gaps = 4/257 (2%)
Strand=Plus/Plus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
Sbjct 9456 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCT-GATGACTCGCGCTTACTAGGAATT-C 9513
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTT-CAAAGATT 119
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 9514 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTTCAAAGATT 9573
Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179
|||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 9574 ACCCGGGCCTGTCGGCCAAGGCTATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 9633
Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGCCTAAAA 239
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 9634 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGCCTAAAC 9693
Query 240 GGCCAT-CTCCCTCGAA 255
|||||| |||||| ||
Sbjct 9694 GGCCATAGTCCCTCTAA 9710
>seq3082
Length=3087
Score = 405 bits (448), Expect = 8e-111
Identities = 247/257 (96%), Gaps = 4/257 (2%)
Strand=Plus/Plus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
Sbjct 1879 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCT-GATGACTCGCGCTTACTAGGAATT-C 1936
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTT-CAAAGATT 119
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 1937 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTTCAAAGATT 1996
Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179
|||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 1997 ACCCGGGCCTGTCGGCCAAGGCTATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 2056
Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGCCTAAAA 239
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2057 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGCCTAAAC 2116
Query 240 GGCCAT-CTCCCTCGAA 255
|||||| |||||| ||
Sbjct 2117 GGCCATAGTCCCTCTAA 2133
>seq4678
Length=16778
Score = 390 bits (432), Expect = 2e-106
Identities = 244/257 (95%), Gaps = 4/257 (2%)
Strand=Plus/Minus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
|||||||||||| |||||||||||||||||| | |||||||||||||||||||||||| |
Sbjct 14796 GTACAAAGGGCAAGGACGTAGTCAACGCGAG-TCGATGACTCGCGCTTACTAGGAATT-C 14739
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTT-CAAAGATT 119
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 14738 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTTCAAAGATT 14679
Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179
||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 14678 ACCCGAGCCTGTCGGCCAAGGCTATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 14619
Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGCCTAAAA 239
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 14618 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGCCTAAAC 14559
Query 240 GGCCAT-CTCCCTCGAA 255
|||||| |||||| ||
Sbjct 14558 GGCCATAGTCCCTCTAA 14542
>seq2905
Length=45512
Score = 381 bits (422), Expect = 9e-104
Identities = 242/257 (94%), Gaps = 4/257 (2%)
Strand=Plus/Minus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
||||||||||||||||||||||||||||||||| ||||||||| | |||||||||||| |
Sbjct 5253 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCT-GATGACTCGTGTTTACTAGGAATT-C 5196
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTT-CAAAGATT 119
||| || |||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 5195 CTCATTAAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTTCAAAGATT 5136
Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179
|||||| | |||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 5135 ACCCGGGCTTGTCGGCCAAGGCTATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 5076
Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGCCTAAAA 239
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 5075 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGCCTAAAC 5016
Query 240 GGCCAT-CTCCCTCGAA 255
|||||| |||||| ||
Sbjct 5015 GGCCATAGTCCCTCTAA 4999
>seq1293
Length=347032
Score = 369 bits (408), Expect = 6e-100
Identities = 239/257 (93%), Gaps = 4/257 (2%)
Strand=Plus/Minus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
||| ||||||||||||||||||||| | ||||| ||||||||||||| ||||||||| |
Sbjct 318917 GTATAAAGGGCAGGGACGTAGTCAATGTGAGCT-GATGACTCGCGCTATCTAGGAATT-C 318860
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAA-GATT 119
|| |||||||| ||||||||||||||||||||||||||||||||||||||| ||| ||||
Sbjct 318859 CTTGTTGAAGAGCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTTAAAAGATT 318800
Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179
|||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 318799 ACCCGGGCCTGTCGGCCAAGGCTATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 318740
Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGCCTAAAA 239
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 318739 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGCCTAAAC 318680
Query 240 GGCCAT-CTCCCTCGAA 255
|||||| |||||| ||
Sbjct 318679 GGCCATAGTCCCTCTAA 318663
>seq4275
Length=21226
Score = 367 bits (406), Expect = 2e-99
Identities = 238/256 (93%), Gaps = 4/256 (2%)
Strand=Plus/Plus
Query 2 TACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTCC 61
||||||||||||||||||||||||| |||||| ||||||||| |||||||| ||||| ||
Sbjct 13897 TACAAAGGGCAGGGACGTAGTCAACACGAGCT-GATGACTCGTGCTTACTAAGAATT-CC 13954
Query 62 TCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTT-CAAAGATTA 120
||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||
Sbjct 13955 TCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCATGATGAAATTTTCAAAGATTA 14014
Query 121 CCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGG 180
||||| |||||||||||||| |||||||||||||||||||||||||||||| ||||
Sbjct 14015 CCCGGGCCTGTCGGCCAAGGCTATAGACTCGTTGAATACATCAGTGTAGCGCATGTGCAA 14074
Query 181 CCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGCCTAAAAG 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 14075 CCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGCCTAAACG 14134
Query 241 GCCAT-CTCCCTCGAA 255
||||| |||||| ||
Sbjct 14135 GCCATAGTCCCTCTAA 14150
>seq1289
Length=351979
Score = 361 bits (400), Expect = 8e-98
Identities = 238/257 (93%), Gaps = 6/257 (2%)
Strand=Plus/Minus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
Sbjct 183916 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCT-GATGACTCGCGCTTACTAGGAATT-C 183859
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTT-CAAAGATT 119
||||||||||||||| |||||||||||||||||||||||||||| |||||| ||||||||
Sbjct 183858 CTCGTTGAAGACCAATAATTGCAATGATCTATCCCCATCACGATAAAATTTTCAAAGATT 183799
Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179
|||| | ||| ||||||||||| |||||||||||||||||||||||||||||| |||
Sbjct 183798 ACCCAGGCCTATCGGCCAAGGTTATAGACTCGTTGAATACATCAGTGTAGCGCATGTG-- 183741
Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGCCTAAAA 239
|||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||
Sbjct 183740 GCCCAGAACATCTAAGAGCATCACAAACCTGTTATTGCCTCAAACTTCCGTGGCCTAAAC 183681
Query 240 GGCCAT-CTCCCTCGAA 255
|||||| |||||| ||
Sbjct 183680 GGCCATAGTCCCTCTAA 183664
>seq2298
Length=78726
Score = 360 bits (398), Expect = 3e-97
Identities = 237/257 (92%), Gaps = 4/257 (2%)
Strand=Plus/Plus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
|||||||| |||||||||||||||||||||||| |||||||||||||||||||||||| |
Sbjct 39992 GTACAAAGCGCAGGGACGTAGTCAACGCGAGCT-GATGACTCGCGCTTACTAGGAATT-C 40049
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTT-CAAAGATT 119
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 40050 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTTCAAAGATT 40109
Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179
||| || | ||| |||||||| |||||||| ||||||||||||||||||||||||||||
Sbjct 40110 ACCTGGGCTTGTTGGCCAAGGCTATAGACTCATTGAATACATCAGTGTAGCGCGCGTGCG 40169
Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGCCTAAAA 239
||| ||||||||||||||||||||||||||||||||| ||||||||||| |||||||||
Sbjct 40170 GCCTAGAACATCTAAGGGCATCACAGACCTGTTATTGTCTCAAACTTCCATGGCCTAAAC 40229
Query 240 GGCCAT-CTCCCTCGAA 255
|||| |||||| ||
Sbjct 40230 AACCATAGTCCCTCTAA 40246
>seq1224
Length=3583
Score = 345 bits (382), Expect = 6e-93
Identities = 206/212 (97%), Gaps = 3/212 (1%)
Strand=Plus/Minus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
Sbjct 210 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCT-GATGACTCGCGCTTACTAGGAATT-C 153
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTT-CAAAGATT 119
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 152 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTTCAAAGATT 93
Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179
|||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 92 ACCCGGGCCTGTCGGCCAAGGCTATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 33
Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGT 211
||||||||||||||||||||||||||||||||
Sbjct 32 GCCCAGAACATCTAAGGGCATCACAGACCTGT 1
>seq3850
Length=26864
Score = 318 bits (352), Expect = 9e-85
Identities = 240/287 (84%), Gaps = 33/287 (11%)
Strand=Plus/Plus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTT- 59
||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||
Sbjct 671 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCT-GATGACTCGCGCTTACTAGGATTTTT 729
Query 60 -----------------------------CCTCGTTGAAGACCAACAATTGCAATGATCT 90
|||||||||||||||||||||||||||||||
Sbjct 730 TTTTTTGGGTAAGTCGCTTACTAGGAATTCCTCGTTGAAGACCAACAATTGCAATGATCT 789
Query 91 ATCCCCATCACGATGAAATTT-CAAAGATTACCCGGACCTGTCGGCCAAGGTGATAGACT 149
||||||||||||||||||||| |||||||||||||| ||||||| |||||| |||||||
Sbjct 790 ATCCCCATCACGATGAAATTTTCAAAGATTACCCGGGCCTGTCGACCAAGGCTATAGACT 849
Query 150 CGTTGAATACATCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCT 209
|||||||||||||| | |||||||||||||||||| ||||| ||||||||||| |||| |
Sbjct 850 CGTTGAATACATCAATATAGCGCGCGTGCGGCCCAAAACATTTAAGGGCATCATAGACTT 909
Query 210 GTTATTGCCTCAAACTTCCGTGGCCTAAAAGGCCAT-CTCCCTCGAA 255
||||||||||||||||||||||||||||| |||||| |||||| ||
Sbjct 910 GTTATTGCCTCAAACTTCCGTGGCCTAAACGGCCATAGTCCCTCTAA 956
>seq4666
Length=16983
Score = 307 bits (340), Expect = 2e-81
Identities = 188/196 (96%), Gaps = 3/196 (2%)
Strand=Plus/Minus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
Sbjct 12411 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCT-GATGACTCGCGCTTACTAGGAATT-C 12354
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTT-CAAAGATT 119
|||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||
Sbjct 12353 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATAAAATTTTCAAAGATT 12294
Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179
|||||| |||||||||||||| |||||||||||||||||||||||||||||||| ||||
Sbjct 12293 ACCCGGGCCTGTCGGCCAAGGCTATAGACTCGTTGAATACATCAGTGTAGCGCGCATGCG 12234
Query 180 GCCCAGAACATCTAAG 195
||||||||||||||||
Sbjct 12233 GCCCAGAACATCTAAG 12218
Score = 98.7 bits (108), Expect = 1e-18
Identities = 66/71 (93%), Gaps = 2/71 (3%)
Strand=Plus/Minus
Query 186 AACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGCCTAAAAGGCCAT 245
|||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 3357 AACA-CTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGCCTAAACGGCCAT 3299
Query 246 -CTCCCTCGAA 255
|||||| ||
Sbjct 3298 AGTCCCTCTAA 3288
>seq600
Length=3765
Score = 295 bits (326), Expect = 1e-77
Identities = 179/187 (96%), Gaps = 2/187 (1%)
Strand=Plus/Plus
Query 71 ACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTT-CAAAGATTACCCGGACCT 129
||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||
Sbjct 1 ACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTTCAAAGATTACCCGGGCCT 60
Query 130 GTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGGCCCAGAACA 189
||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 61 GTCGGCCAAGGCTATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGGCCCAGAACA 120
Query 190 TCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGCCTAAAAGGCCAT-CTC 248
||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||
Sbjct 121 TCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGCCTAAACGGCCATAGTC 180
Query 249 CCTCGAA 255
|||| ||
Sbjct 181 CCTCTAA 187
>seq6
Length=34899179
Score = 197 bits (218), Expect = 2e-48
Identities = 150/173 (87%), Gaps = 3/173 (2%)
Strand=Plus/Minus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
|||||||||| || ||| ||| ||| ||||||| ||||||||| ||| | || ||||| |
Sbjct 721751 GTACAAAGGGTAGAGACATAGCCAATGCGAGCT-GATGACTCGTGCTCAATAAGAATT-C 721694
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTT-CAAAGATT 119
|| |||||| |||||||||||||| |||||||||||| |||||||||||| ||||||||
Sbjct 721693 CTTGTTGAAAGCCAACAATTGCAATTATCTATCCCCATTACGATGAAATTTTCAAAGATT 721634
Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGC 172
|||| | | |||| |||||||| ||||||||||||||||||| ||||||||||
Sbjct 721633 ACCCAGGCTTGTCAGCCAAGGTTATAGACTCGTTGAATACATTAGTGTAGCGC 721581
Score = 111 bits (122), Expect = 2e-22
Identities = 104/130 (80%), Gaps = 2/130 (2%)
Strand=Plus/Plus
Query 109 TTTCAAAGATTACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTA 168
||| ||| ||||| || | |||| ||||| | ||| ||||||||||| |||| ||||
Sbjct 32811193 TTTTAAAAATTACTCGAGCTTGTCC-CCAAGATTATACACTCGTTGAATGCATCGATGTA 32811251
Query 169 GCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 228
| |||||| |||| ||||||||| |||||||||||||| |||||||||||||| ||
Sbjct 32811252 ATGTGCGTGCAACCCAAAACATCTAATGGCATCACAGACCTATTATTGCCTCAAACATCT 32811311
Query 229 GTGGCCTAAA 238
| | ||||||
Sbjct 32811312 G-GACCTAAA 32811320
Score = 105 bits (116), Expect = 1e-20
Identities = 103/130 (79%), Gaps = 2/130 (2%)
Strand=Plus/Plus
Query 109 TTTCAAAGATTACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTA 168
||| ||| ||||| || | ||||| ||||| ||| |||| |||||| |||| ||||
Sbjct 32810672 TTTTAAAAATTACTCGAGCTTGTCG-CCAAGACTATACACTCATTGAATGCATCGATGTA 32810730
Query 169 GCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 228
| | | |||| |||||||||||||| ||||||||| |||| |||||||||||||| ||
Sbjct 32810731 GTGTGTGTGCAACCCAGAACATCTAATGGCATCACAAACCTATTATTGCCTCAAACATCT 32810790
Query 229 GTGGCCTAAA 238
| | ||||||
Sbjct 32810791 G-GACCTAAA 32810799
>seq8
Length=35439739
Score = 161 bits (178), Expect = 1e-37
Identities = 182/239 (76%), Gaps = 5/239 (2%)
Strand=Plus/Plus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
|||||||||||||| | |||||| | || |||||||||| | ||| || ||||| |
Sbjct 29030672 GTACAAAGGGCAGGAATATAGTCACCATAAG-TTGATGACTCATGTTTATTATGAATT-C 29030729
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAA-TTTCAAAGATT 119
||||||||||||||||||||| |||||||||||||||||| ||| ||| ||| |||||||
Sbjct 29030730 CTCGTTGAAGACCAACAATTGTAATGATCTATCCCCATCATGATAAAATTTTTAAAGATT 29030789
Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179
|| | | | || ||||| ||| ||| || || ||| || | ||| |
Sbjct 29030790 ACTCAGGATTATCAAACAAGGCTATACACT--TTACTTAATATAGTAATACGTGTGTGTG 29030847
Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGCCTAAA 238
||||| ||||| ||| ||||||| |||| ||||||| |||||||||| |||| ||||
Sbjct 29030848 GCCCAAAACATTTAAAGGCATCATAGACATGTTATTACCTCAAACTTTTATGGCTTAAA 29030906
>seq2
Length=22054697
Score = 116 bits (128), Expect = 6e-24
Identities = 112/142 (79%), Gaps = 19/142 (13%)
Strand=Plus/Plus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
|||||||||||||||||||| ||||||| || | ||||| |||| |
Sbjct 19751538 GTACAAAGGGCAGGGACGTA---------------ATGACTCACGATAACTAGAAATT-C 19751581
Query 61 CTCGTTGAAGACCAACAATTGCAATG-ATCTATCCCCATCACGAT-GAAATTTCAAAGAT 118
|||||||||||||| |||||||| | |||||| ||||||||||| ||| ||||||||||
Sbjct 19751582 CTCGTTGAAGACCACTAATTGCAAGGAATCTAT-CCCATCACGATCGAACTTTCAAAGAT 19751640
Query 119 TACCCGGACCTGTCGGCCAAGG 140
||| ||| |||||| |||||||
Sbjct 19751641 TACACGGGCCTGTCAGCCAAGG 19751662
>seq3
Length=30470407
Score = 100 bits (110), Expect = 4e-19
Identities = 102/131 (78%), Gaps = 4/131 (3%)
Strand=Plus/Plus
Query 114 AAGATTACCCGGACCTGTCGGCCAAGGTGATA--GACTCGTTGAATACATCAGTGTAGCG 171
||||||||| || | ||||||| ||| ||| ||||||||||||| |||| | ||||
Sbjct 27115045 AAGATTACCAGGGCTTGTCGGCTGAGGCTATATAGACTCGTTGAATATATCAATATAGCA 27115104
Query 172 CGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTG 231
||| || |||||| |||||||| |||||||| | | ||||||||| |||||| |||
Sbjct 27115105 CGCATGTGGCCCAAAACATCTAGGGGCATCATAAATGTGTTATTGC--GAAACTTTTGTG 27115162
Query 232 GCCTAAAAGGC 242
| |||| |||
Sbjct 27115163 GGTTAAATGGC 27115173
>seq5081
Length=14249
Score = 86.0 bits (94), Expect = 9e-15
Identities = 52/54 (96%), Gaps = 1/54 (2%)
Strand=Plus/Minus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGG 54
|||||||||||||||||||||||||||||||| ||||||||| |||||||||||
Sbjct 53 GTACAAAGGGCAGGGACGTAGTCAACGCGAGC-TGATGACTCTCGCTTACTAGG 1
>seq7
Length=28617404
Score = 75.2 bits (82), Expect = 2e-11
Identities = 125/177 (71%), Gaps = 4/177 (2%)
Strand=Plus/Minus
Query 66 TGAAGACCAAC--AATTGCAATGATCTATCCCCATCACGATGAAATTT-CAAAGATTACC 122
|||||| ||| || |||||||||| ||||| | | |||||||| | | ||| |
Sbjct 21726806 TGAAGATCAAAGAAACTGCAATGATCAATCCCAAAACTGGTGAAATTTTCGATAATTGCT 21726747
Query 123 CGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGGCC 182
||| ||| || || || || ||| |||| | | | || | || || ||| ||
Sbjct 21726746 CGGGCCTATCAGCTTAGTGTATGGACATGTTGGGTTCCTTGGTATGGCAAGCATGCAGCA 21726687
Query 183 CAGAACATCTAAGGGCATCAC-AGACCTGTTATTGCCTCAAACTTCCGTGGCCTAAA 238
||||||| |||| |||||| | | | |||||||||||| |||||||| || | ||||
Sbjct 21726686 CAGAACAGCTAAAGGCATCCCCACATCTGTTATTGCCTGAAACTTCCATGTCTTAAA 21726630
>seq10
Length=33665772
Score = 73.4 bits (80), Expect = 6e-11
Identities = 87/115 (76%), Gaps = 6/115 (5%)
Strand=Plus/Plus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
|||||||| ||| | | | |||| || || ||||||||| ||||||| ||||||
Sbjct 28272837 GTACAAAGAGCAATTATGCAATCAATATGAACTA-ATGACTCGCACTTACTACGAATTTA 28272895
Query 61 CTCGTTGAAGACCAACAATT----GCAATGATCTATCCCCATCACGATGAAATTT 111
| ||||||| |||| ||| |||||||| ||||||||||| ||| ||||||
Sbjct 28272896 TT-GTTGAAGGCCAATTATTTTTTGCAATGATATATCCCCATCATGATAAAATTT 28272949
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 751947118185
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |