Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Musa_20acuminata_20subsp._20malaccensis_20[refseq_20GCF_5F000313855.
2_202012-11-14] 7,259 sequences; 472,231,289 total letters
Query= AAMG01000278.1
Length=318
Score E
Sequences producing significant alignments: (Bits) Value
seq4678 230 4e-58
seq2905 230 4e-58
seq600 230 4e-58
seq4666 224 2e-56
seq4736 221 2e-55
seq4275 219 8e-55
seq10 215 9e-54
seq3082 147 4e-33
seq6 147 4e-33
seq11 120 6e-25
seq3867 96.9 6e-18
>seq4678
Length=16778
Score = 230 bits (254), Expect = 4e-58
Identities = 202/248 (81%), Gaps = 3/248 (1%)
Strand=Plus/Plus
Query 72 CTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTC-GAATACATTAGCAT 130
|| |||||||||| ||||||||||| |||||||| ||| ||||| | ||||||| ||||
Sbjct 13902 CTGTTACTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCCATGCTCTGGATACATTTGCAT 13961
Query 131 GGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGAT 190
|| |||| | | |||| | |||| ||||| |||||| | ||| || ||||||||
Sbjct 13962 GGGATAACATCACAGGATTT-CGGTCCTATTGTGTTGGCCTTCGGGATCGGAGTAATGAT 14020
Query 191 TAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTAT 250
||| ||||| ||||||||| | ||||| || ||||||||||||||||||||||||||
Sbjct 14021 TAAGAGGGACAGTCGGGGGCATTCGTATTTCATAGTCAGAGGTGAAATTCTTGGATTTAT 14080
Query 251 TGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAA 310
||||| ||| ||||||||||| || |||||||||||||||||||||| ||||||||
Sbjct 14081 GAAAGACGAACCACTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCA-AGAACGAAA 14139
Query 311 GTTAGGGG 318
||| ||||
Sbjct 14140 GTTGGGGG 14147
>seq2905
Length=45512
Score = 230 bits (254), Expect = 4e-58
Identities = 202/248 (81%), Gaps = 3/248 (1%)
Strand=Plus/Plus
Query 72 CTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGA-ATACATTAGCAT 130
|| |||||||||| ||||||||||| |||||||| ||| |||| | ||||||||||||
Sbjct 4300 CTGTTACTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCCACGCTCTAGATACATTAGCAT 4359
Query 131 GGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGAT 190
|| |||| | | |||| | |||| ||||| |||||| | ||| || ||||||||
Sbjct 4360 GGGATAACATCACAGGATTT-CGGTCCTATTGTGTTGGCCTTCGGGATCGGAGTAATGAT 4418
Query 191 TAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTAT 250
||| ||||| ||||||||| | ||||| || ||||||||||||||||||||||||||
Sbjct 4419 TAAGAGGGACAGTCGGGGGCATTCGTATTTCATAGTCAGAGGTGAAATTCTTGGATTTAT 4478
Query 251 TGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAA 310
||||| ||| ||||||||||| || |||||||||||||||||||||| ||||||||
Sbjct 4479 GAAAGACGAACCACTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCA-AGAACGAAA 4537
Query 311 GTTAGGGG 318
||| ||||
Sbjct 4538 GTTGGGGG 4545
>seq600
Length=3765
Score = 230 bits (254), Expect = 4e-58
Identities = 244/316 (77%), Gaps = 8/316 (3%)
Strand=Plus/Minus
Query 9 CCGGCCGGGCCTTTCCTTCTG---GGGATCCG--CATGCCCTTCACTGGGTGTGCCGGGG 63
|||| || || | ||||||| | ||| || | || |||| ||||| | | || |
Sbjct 895 CCGGTCGTCCCATCCCTTCTGTCGGCGATGCGTGCCTGGCCTTAACTGGCCGGGTCGTGC 836
Query 64 AGCCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTC-GAATAC 122
|| | || |||||||||| ||||||||||| |||||||| ||| |||| | ||||
Sbjct 835 CTCCGGCGCTGTTACTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCCACGCTCTGGATAC 776
Query 123 ATTAGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCC 182
|||||||||| |||| | | |||| | |||| ||||| |||||| | ||| ||
Sbjct 775 ATTAGCATGGGATAACATCACAGGATTT-CGGTCCTATTGTGTTGGCCTTCGGGATCGGA 717
Query 183 GTAATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTT 242
||||||||||| ||||| ||||||||| | ||||| || ||||||||||||||||||
Sbjct 716 GTAATGATTAAGAGGGACAGTCGGGGGCATTCGTATTTCATAGTCAGAGGTGAAATTCTT 657
Query 243 GGATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGT 302
|||||||| ||||| ||| ||||||||||| || ||||||||||||||||||||||
Sbjct 656 GGATTTATGAAAGACGAACCACTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCA-A 598
Query 303 GAACGAAAGTTAGGGG 318
||||||||||| ||||
Sbjct 597 GAACGAAAGTTGGGGG 582
>seq4666
Length=16983
Score = 224 bits (248), Expect = 2e-56
Identities = 201/248 (81%), Gaps = 3/248 (1%)
Strand=Plus/Plus
Query 72 CTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTC-GAATACATTAGCAT 130
|| |||||||||| ||||||||||| |||||| | ||| |||| | ||||||||||||
Sbjct 2648 CTGTTACTTTGAAGAAATTAGAGTGCTCAAAGTAAGCCCACGCTCTGGATACATTAGCAT 2707
Query 131 GGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGAT 190
|| |||| | | |||| | | || ||||| |||||| | ||| || ||||||||
Sbjct 2708 GGGATAACATCACAGGATTT-CAGTCCTATTGTGTTGGCCTTCGGGATCGGAGTAATGAT 2766
Query 191 TAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTAT 250
||| ||||||||||||||| | ||||| || ||||||||||||||||||||||||||
Sbjct 2767 TAAGAGGGATAGTCGGGGGCATTCGTATTTCATAGTCAGAGGTGAAATTCTTGGATTTAT 2826
Query 251 TGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAA 310
||||| ||| ||||||||||| || |||||||||||||||||||||| ||||||||
Sbjct 2827 GAAAGACGAACCACTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCA-AGAACGAAA 2885
Query 311 GTTAGGGG 318
||| ||||
Sbjct 2886 GTTGGGGG 2893
>seq4736
Length=15983
Score = 221 bits (244), Expect = 2e-55
Identities = 242/316 (77%), Gaps = 8/316 (3%)
Strand=Plus/Minus
Query 9 CCGGCCGGGCCTTTCCTTCTG---GGGATCCG--CATGCCCTTCACTGGGTGTGCCGGGG 63
|||| || || | ||||||| | ||| || | || |||| ||||| | | || |
Sbjct 2645 CCGGTCGTCCCATCCCTTCTGTCGGCGATGCGTGCCTGGCCTTAACTGGCCGGGTCGTGC 2586
Query 64 AGCCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTC-GAATAC 122
|| | || |||||||||| ||||||||||| |||||||| |||| ||||| | ||||
Sbjct 2585 CTCCGGCGCTGTTACTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCTATGCTCTGGATAC 2526
Query 123 ATTAGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCC 182
|||||| ||| |||| | | |||| | |||| ||||| |||||| | ||| ||
Sbjct 2525 ATTAGCGTGGGATAACATCACAGGATTT-CGGTCCTATTGTGTTGGCCTTCGGGATCGGA 2467
Query 183 GTAATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTT 242
||||||||||| ||||| ||||||||| | ||||| || ||||||||||||||||||
Sbjct 2466 GTAATGATTAAGAGGGACAGTCGGGGGCATTCGTATTTCATAGTCAGAGGTGAAATTCTT 2407
Query 243 GGATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGT 302
||||||| | ||| ||| ||| ||||||| || ||||||||||||||||||||||
Sbjct 2406 TGATTTATGAAGGACGAACCACTACGAAAGCATTTGCCAAGGATGTTTTCATTAATCA-A 2348
Query 303 GAACGAAAGTTAGGGG 318
||||||||||| ||||
Sbjct 2347 GAACGAAAGTTGGGGG 2332
>seq4275
Length=21226
Score = 219 bits (242), Expect = 8e-55
Identities = 198/245 (81%), Gaps = 3/245 (1%)
Strand=Plus/Minus
Query 75 TTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTC-GAATACATTAGCATGGA 133
|||||||||| ||||||||||| |||||||| ||| |||| | ||||||||||||||
Sbjct 14787 TTACTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCCACGCTCTGGATACATTAGCATGGG 14728
Query 134 ATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAA 193
|||| | | |||| | |||| ||||| |||||| | ||| | |||| ||||||
Sbjct 14727 ATAACATTACAGGATTT-CGGTCCTATTGTGTTGGCCTTCGGGATCAGAGTAACGATTAA 14669
Query 194 TAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGA 253
||||| ||||||||| | ||||| || |||||||||||||||||||||||||| |
Sbjct 14668 GAGGGACAGTCGGGGGCATTCGTATTTCATAGTCAGAGGTGAAATTCTTGGATTTATGAA 14609
Query 254 AGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGTT 313
|||| ||| ||||||||||| || |||||||||||||||||||||| |||||||||||
Sbjct 14608 AGACGAACCACTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCA-AGAACGAAAGTT 14550
Query 314 AGGGG 318
||||
Sbjct 14549 GGGGG 14545
>seq10
Length=33665772
Score = 215 bits (238), Expect = 9e-54
Identities = 197/245 (80%), Gaps = 3/245 (1%)
Strand=Plus/Minus
Query 75 TTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTC-GAATACATTAGCATGGA 133
|||||||||| ||||||||||| |||||||| ||| |||| | ||||||||||||||
Sbjct 6134556 TTACTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCCACGCTCTGGATACATTAGCATGGG 6134497
Query 134 ATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAA 193
|||| | | |||| | |||| ||||| |||||| | ||| || |||||||||||
Sbjct 6134496 ATAACATCACAGGATTT-CGGTCCTATTGTGTTGGCCTTCGGGATCGGAGTAATGATTAA 6134438
Query 194 TAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGA 253
||||| ||||||||| | ||||| || |||||||||||||||||||||||||| |
Sbjct 6134437 GAGGGACAGTCGGGGGCATTCGTATTTCATAGTCAGAGGTGAAATTCTTGGATTTATGAA 6134378
Query 254 AGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGTT 313
||| ||| ||||||||||| || ||||||||||||| |||||||| |||| ||||||
Sbjct 6134377 AGATGAACCACTGCGAAAGCATTTGCCAAGGATGTTTTTATTAATCA-AGAACAAAAGTT 6134319
Query 314 AGGGG 318
||||
Sbjct 6134318 GGGGG 6134314
>seq3082
Length=3087
Score = 147 bits (162), Expect = 4e-33
Identities = 115/136 (85%), Gaps = 1/136 (1%)
Strand=Plus/Minus
Query 183 GTAATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTT 242
||||||||||| ||||| ||||||||| | ||||| || ||||||||||||||||||
Sbjct 2663 GTAATGATTAAGAGGGACAGTCGGGGGCATTCGTATTTCATAGTCAGAGGTGAAATTCTT 2604
Query 243 GGATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGT 302
|||||||| ||||| ||| ||||||||||| || ||||||| |||||||||||||||
Sbjct 2603 GGATTTATGAAAGACGAACCACTGCGAAAGCATTTACCAAGGGTGTTTTCATTAATCA-A 2545
Query 303 GAACGAAAGTTAGGGG 318
||| ||| |||||||
Sbjct 2544 AAACAAAACTTAGGGG 2529
>seq6
Length=34899179
Score = 147 bits (162), Expect = 4e-33
Identities = 163/215 (76%), Gaps = 2/215 (1%)
Strand=Plus/Minus
Query 72 CTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTC-GAATACATTAGCAT 130
|| |||||| || ||||||||||| |||||||| || |||| | ||||||||||||
Sbjct 3943556 CTGTTACTTAAAAGAAATTAGAGTGCTCAAAGCAAACCCACGCTCTGGATACATTAGCAT 3943497
Query 131 GGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGAT 190
|| |||| | | | || | || | ||||| |||||| | ||| || ||||||||
Sbjct 3943496 GGGATAACATCACAAGATTT-CGATCCTATTGTGTTGGCCTTCGGGATCGGAGTAATGAT 3943438
Query 191 TAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTAT 250
||| | ||||||||||||| | ||||| || ||||||||||||||| || ||||||
Sbjct 3943437 TAAGAAGGATAGTCGGGGGCATTCGTATTTCATAGTCAGAGGTGAAATTATTATATTTAT 3943378
Query 251 TGAAGACTAACTACTGCGAAAGCGTTCACCAAGGA 285
|||| ||| ||||||||||| || |||||||
Sbjct 3943377 GAAAGATGAACCACTGCGAAAGCATTTGCCAAGGA 3943343
>seq11
Length=25514024
Score = 120 bits (132), Expect = 6e-25
Identities = 131/170 (77%), Gaps = 3/170 (2%)
Strand=Plus/Plus
Query 71 ACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTC-GAATACATTAGCA 129
||| || ||||||| ||||||||||| |||||||| ||| |||| | || || |||||
Sbjct 22430547 ACTGTTGCTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCCACGCTCTGGATCCAATAGCA 22430606
Query 130 TGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGA 189
| | |||| | |||||| | || | ||||| |||||| | |||| || |||||||
Sbjct 22430607 TAGGATAACACCATAGGA-TTTCGATCCTATTGTGTTGGCCTTCAGGATCGGAGTAATGA 22430665
Query 190 TTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATT 239
|||| ||||| ||| |||| | || ||||| || |||||||||||||||
Sbjct 22430666 TTAAGAGGGACAGTTGGGGCT-TCCGTATTTCATGGTCAGAGGTGAAATT 22430714
>seq3867
Length=26241
Score = 96.9 bits (106), Expect = 6e-18
Identities = 73/85 (86%), Gaps = 1/85 (1%)
Strand=Plus/Minus
Query 234 GAAATTCTTGGATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCA 293
||||||||||||||||| ||||| ||||||||| ||||| || |||| ||||||||||
Sbjct 10189 GAAATTCTTGGATTTATGAAAGACGAACTACTGCAAAAGCATTTGCCAAAGATGTTTTCA 10130
Query 294 TTAATCAGTGAACGAAAGTTAGGGG 318
||||||| ||| ||||||| ||||
Sbjct 10129 TTAATCA-AGAATGAAAGTTGGGGG 10106
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 915133565632
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