Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Musa_20acuminata_20subsp._20malaccensis_20[refseq_20GCF_5F000313855.
2_202012-11-14] 7,259 sequences; 472,231,289 total letters
Query= AAMG01000383.1
Length=435
Score E
Sequences producing significant alignments: (Bits) Value
seq1035 161 3e-37
>seq1035
Length=594915
Score = 161 bits (178), Expect = 3e-37
Identities = 238/333 (71%), Gaps = 8/333 (2%)
Strand=Plus/Minus
Query 8 GAAGAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGCAAGCG 67
|| ||| |||| ||||| |||| |||||||||||||||||||||||| ||| ||||| |
Sbjct 2027 GAGGAAGAAGCCCCGGCAAACTCCGTGCCAGCAGCCGCGGTAATACGGGGGGGGCAAGTG 1968
Query 68 TTAATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGTTGTGTAAGA---CAGGTGTGA 124
|| ||||||| ||| ||||||||| | | ||| || | | | || || | |
Sbjct 1967 TTCTTCGGAATGACTAGGCGTAAAGGGCACTACGGCAGT-GAATCGGGTTGCAAGT-TCA 1910
Query 125 AATCCCCGGGCTTAACCTGGGAATTGCATTTGTGACTGCACGACTAGAGTGTGTCAGAGG 184
| || || |||| | | | ||| | | || ||| ||||| | ||||||
Sbjct 1909 AGTCGCCAAA---AACCGGCGGAATGCTCTCGAAACCAATTCACTTGAGTGAGACAGAGG 1853
Query 185 GGGGTGGAATTCCACGTGTAGCAGTGAAATGCGTAGATATGTGGAGGAACACCAATGGCG 244
| || ||| | |||||| || |||| ||||||| | | ||||| |||| |||
Sbjct 1852 AGAGTTTCATTTCGTGTGTAGGGGTTAAATCCGTAGATCTACGAAGGAAGGCCAAAAGCG 1793
Query 245 AAGGCAGCCCCCTGGGATAACACTGACGCTCATGCACGAAAGCGTGGGGAGCAAACAGGA 304
|||||||| | |||| ||||||||| | | ||||||| |||||||||||| |||
Sbjct 1792 AAGGCAGCTCTTTGGGTCCCTACTGACGCTGAGGTGCGAAAGCATGGGGAGCAAACTGGA 1733
Query 305 TTAGATACCCTGGTAGTCCACGCCCTAAACGAT 337
|||||||||| ||||||||| ||| ||||||||
Sbjct 1732 TTAGATACCCAGGTAGTCCATGCCGTAAACGAT 1700
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1289506387936
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |