Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Musa_20acuminata_20subsp._20malaccensis_20[refseq_20GCF_5F000313855. 2_202012-11-14] 7,259 sequences; 472,231,289 total letters Query= AAMG01000383.1 Length=435 Score E Sequences producing significant alignments: (Bits) Value seq1035 161 3e-37 >seq1035 Length=594915 Score = 161 bits (178), Expect = 3e-37 Identities = 238/333 (71%), Gaps = 8/333 (2%) Strand=Plus/Minus Query 8 GAAGAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGCAAGCG 67 || ||| |||| ||||| |||| |||||||||||||||||||||||| ||| ||||| | Sbjct 2027 GAGGAAGAAGCCCCGGCAAACTCCGTGCCAGCAGCCGCGGTAATACGGGGGGGGCAAGTG 1968 Query 68 TTAATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGTTGTGTAAGA---CAGGTGTGA 124 || ||||||| ||| ||||||||| | | ||| || | | | || || | | Sbjct 1967 TTCTTCGGAATGACTAGGCGTAAAGGGCACTACGGCAGT-GAATCGGGTTGCAAGT-TCA 1910 Query 125 AATCCCCGGGCTTAACCTGGGAATTGCATTTGTGACTGCACGACTAGAGTGTGTCAGAGG 184 | || || |||| | | | ||| | | || ||| ||||| | |||||| Sbjct 1909 AGTCGCCAAA---AACCGGCGGAATGCTCTCGAAACCAATTCACTTGAGTGAGACAGAGG 1853 Query 185 GGGGTGGAATTCCACGTGTAGCAGTGAAATGCGTAGATATGTGGAGGAACACCAATGGCG 244 | || ||| | |||||| || |||| ||||||| | | ||||| |||| ||| Sbjct 1852 AGAGTTTCATTTCGTGTGTAGGGGTTAAATCCGTAGATCTACGAAGGAAGGCCAAAAGCG 1793 Query 245 AAGGCAGCCCCCTGGGATAACACTGACGCTCATGCACGAAAGCGTGGGGAGCAAACAGGA 304 |||||||| | |||| ||||||||| | | ||||||| |||||||||||| ||| Sbjct 1792 AAGGCAGCTCTTTGGGTCCCTACTGACGCTGAGGTGCGAAAGCATGGGGAGCAAACTGGA 1733 Query 305 TTAGATACCCTGGTAGTCCACGCCCTAAACGAT 337 |||||||||| ||||||||| ||| |||||||| Sbjct 1732 TTAGATACCCAGGTAGTCCATGCCGTAAACGAT 1700 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1289506387936